Ramón Alain Miranda‐Quintana

Physics and AstronomyMaterials ScienceChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 21 papers. Top paper: “SHINE: Deterministic Many-to-Many clustering of Molecular Pathways”.

SHINE: Deterministic Many-to-Many clustering of Molecular Pathways

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.07.636541

N/A

0.104DataRank · unranked

1 citations

Jeremy M. G. Leung, Krisztina Zsigmond, Lillian T. Chong, Ramón Alain Miranda‐Quintana, Lexin Chen

Selector : A General Python Library for Diverse Subset Selection

Journal of Chemical Information and Modeling(2026)10.1021/acs.jcim.5c01499

N/A

0.104DataRank · unranked

1 citations

Marco Martínez González, Valerii Chuiko, Alireza Tehrani, Abdul Rahman Al Nabulsi, Abigail Broscius +6 more

Molecular Similarity: Theory, Applications, and Perspectives

ChemRxiv(2023)10.26434/chemrxiv-2023-cs3wb

N/A

0DataRank · unranked

3 citations

Juan Avellaneda Tamayo, Lexin Chen, Edgar López López, K. Euridice Juarez Mercado, José L. Medina‐Franco +2 more

Molecular similarity: Theory, applications, and perspectives

Artificial Intelligence Chemistry(2024)10.1016/j.aichem.2024.100077

N/A

0DataRank · unranked

45 citations

Juan F. Avellaneda-Tamayo, Lexin Chen, Edgar López‐López, K. Eurídice Juárez‐Mercado, José L. Medina‐Franco +2 more

k-Means NANI: An Improved Clustering Algorithm for Molecular Dynamics Simulations

Journal of Chemical Theory and Computation(2024)10.1021/acs.jctc.4c00308

N/A

0DataRank · unranked

39 citations

Daniel R. Roe, Matthew Kochert, Carlos Simmerling, Ramón Alain Miranda‐Quintana, Lexin Chen

Protein Retrieval via Integrative Molecular Ensembles (PRIME) through Extended Similarity Indices

Journal of Chemical Theory and Computation(2024)10.1021/acs.jctc.4c00362

N/A

0DataRank · unranked

13 citations

Arup Mondal, Alberto Perez, Ramón Alain Miranda‐Quintana, Lexin Chen

Extended similarity methods for efficient data mining in imaging mass spectrometry

Digital Discovery(2024)10.1039/d3dd00165b

N/A

0DataRank · unranked

7 citations

Yingchan Guo, Ramón Alain Miranda‐Quintana, Boone M. Prentice, Nicholas R. Ellin

Efficient clustering of large molecular libraries

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.10.607459

N/A

0DataRank · unranked

9 citations

Vicky Jung, Lexin Chen, Kate Huddleston, Ramón Alain Miranda‐Quintana, Kenneth López Pérez

Extended Quality (eQual): Radial threshold clustering based on n-ary similarity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.05.627001

N/A

0DataRank · unranked

6 citations

Micah J. Smith, Daniel R. Roe, Ramón Alain Miranda‐Quintana, Lexin Chen

k-Means NANI: an improved clustering algorithm for Molecular Dynamics simulations

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.07.583975

N/A

0DataRank · unranked

3 citations

Daniel R. Roe, Matthew Kochert, Carlos Simmerling, Ramón Alain Miranda‐Quintana, Lexin Chen

iSIM: Instant Similarity

ChemRxiv(2023)10.26434/chemrxiv-2023-fxlxg

N/A

0DataRank · unranked

4 citations

Taewon Kim, Ramón Alain Miranda‐Quintana, Kenneth López Pérez

Sampling Chemical Space: Activity Cliffs, Extended Similarity, and ML Performance

ChemRxiv(2024)10.26434/chemrxiv-2024-c9n3w

N/A

0DataRank · unranked

1 citations

Ramón Alain Miranda‐Quintana, Kenneth López‐Pérez

Alternative weighting schemes for fine-tuned extended similarity index calculations

ChemRxiv(2024)10.26434/chemrxiv-2024-0b8sf

N/A

0DataRank · unranked

1 citations

Anita Rácz, Dávid Bajusz, Camila Gonzalez, Károly Héberger, Ramón Alain Miranda‐Quintana +1 more

Alternative weighting schemes for fine‐tuned extended similarity indices

Journal of Chemometrics(2024)10.1002/cem.3558

N/A

0DataRank · unranked

0 citations

Anita Rácz, Dávid Bajusz, Camila Gonzalez, Károly Héberger, Ramón Alain Miranda‐Quintana +1 more

BitBIRCH Clustering Refinement Strategies

Journal of Chemical Information and Modeling(2025)10.1021/acs.jcim.5c00627

N/A

0DataRank · unranked

5 citations

Kate Huddleston, Vicky Jung, Ramón Alain Miranda‐Quintana, Kenneth López Pérez

BitBIRCH-Lean: chemical space in the palm of your workstation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.22.684015

N/A

0DataRank · unranked

2 citations

Krisztina Szigmond, Kenneth López Pérez, Miroslav Lžičař, Ramón Alain Miranda‐Quintana, Ignacio Pickering

Undersampling techniques for non-linear chemical space visualization

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.663077

N/A

0DataRank · unranked

1 citations

Krisztina Zsigmond, Ramón Alain Miranda‐Quintana, Akash Surendran

Best practices to cluster large molecular libraries

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.28.691214

N/A

0DataRank · unranked

0 citations

Ramón Alain Miranda‐Quintana, Kenneth Lope Perez

Selector: A General Python Library for Diverse Subset Selection

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.21.689756

N/A

0DataRank · unranked

0 citations

Marco Martínez González, Valerii Chuiko, Alireza Tehrani, Abdul Rahman Al Nabulsi, Abigail Broscius +6 more

Protein Retrieval via Integrative Molecular Ensembles (PRIME) through extended similarity indices

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.19.585783

N/A

0DataRank · unranked

2 citations

Arup Mondal, Alberto Perez, Ramón Alain Miranda‐Quintana, Lexin Chen

Extended Similarity Methods for Efficient Data Mining in Imaging Mass Spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.27.550838

N/A

0DataRank · unranked

3 citations

Ramón Alain Miranda‐Quintana, Boone M. Prentice, Nicholas R. Ellin