Yi‐Juan Hu

Also affiliated with Peking University International Hospital, Beijing International Studies University

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.104Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrative analysis of sequencing and array genotype data for discovering disease associations with rare mutations

UNC Libraries(2020)10.17615/nngh-g785

Top 78%

0.104DataRank

Top 78%1 citations

D. Y. Lin, Yun Li, Paul L. Auer, Yi‐Juan Hu

Papers

Driven by 50 papers — median percentile 11. Top paper: “Comparison of genomic diversity between single and pooled Staphylococcus aureus colonies isolated from human colonization cultures”.

Comparison of genomic diversity between single and pooled Staphylococcus aureus colonies isolated from human colonization cultures

Microbial Genomics(2023)10.1099/mgen.0.001111

N/A

0.669DataRank · unranked

21 citations

Jessica J. Gunoskey, Katrina S. Hofstetter, Natasia F Jacko, Margot J. Shumaker, Yi‐Juan Hu +3 more

LOCOM: A logistic regression model for testing differential abundance in compositional microbiome data with false discovery rate control

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2122788119

N/A

0.604DataRank · unranked

55 citations

Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

A rarefaction-based extension of the LDM for testing presence–absence associations in the microbiome

Bioinformatics(2021)10.1093/bioinformatics/btab012

N/A

0.500DataRank · unranked

27 citations

Andrea Lane, Glen A. Satten, Yi‐Juan Hu

A new approach to testing mediation of the microbiome at both the community and individual taxon levels

Bioinformatics(2022)10.1093/bioinformatics/btac310

N/A

0.483DataRank · unranked

24 citations

Yi‐Juan Hu, Ye Yue

Integrative analysis of relative abundance data and presence–absence data of the microbiome using the LDM

Bioinformatics(2022)10.1093/bioinformatics/btac181

N/A

0.396DataRank · unranked

13 citations

Glen A. Satten, Yi‐Juan Hu, Zhengyi Zhu

HIV, asymptomatic STI, and the rectal mucosal immune environment among young men who have sex with men

PLoS Pathogens(2023)10.1371/journal.ppat.1011219

N/A

0.345DataRank · unranked

9 citations

S. Abigail Smith, Yi‐Juan Hu, Gregory K. Tharp, Steven E. Bosinger, Cassie Grimsley Ackerley +7 more

Interaction between genetics and smoking in determining risk of coronary artery diseases

Genetic Epidemiology(2022)10.1002/gepi.22446

N/A

0.312DataRank · unranked

7 citations

Qin Hui, Marta Gwinn, Yi‐Juan Hu, Arshed A. Quyyumi, Viola Vaccarino +2 more

Testing Mediation Effects in High-Dimensional Microbiome Data with False Discovery Rate Control

Research Square(2021)10.21203/rs.3.rs-1105471/v1

N/A

0.269DataRank · unranked

5 citations

Yi‐Juan Hu, Ye Yue

LOCOM: A logistic regression model for testing differentialabundance in compositional microbiome data with false discovery rate control

Research Square(2021)10.21203/rs.3.rs-965818/v1

N/A

0.208DataRank · unranked

3 citations

Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

A Rarefaction-Without-Resampling Extension of PERMANOVA for Testing Presence-Absence Associations in The Microbiome

Research Square(2021)10.21203/rs.3.rs-774776/v1

N/A

0.208DataRank · unranked

3 citations

Glen A. Satten, Yi‐Juan Hu

A Multivariable Mendelian Randomization Study of Systolic and Diastolic Blood Pressure, Lipid Profile, and Heart Failure Subtypes

Genes(2024)10.3390/genes15091126

N/A

0.208DataRank · unranked

3 citations

Qin Hui, Quinn S. Wells, Eric Farber‐Eger, John Michael Gaziano, Peter W.F. Wilson +9 more

Integrated analysis of rectal mucosal microbiome and transcriptome reveals a distinct microenvironment among young MSM

JCI Insight(2024)10.1172/jci.insight.181720

N/A

0.165DataRank · unranked

2 citations

S. Abigail Smith, Phillip M. Murray, Praveen K. Amancha, Vanessa Van Doren, Gregory K. Tharp +5 more

Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture

WOS(2020)10.17615/dkeh-7r02

N/A

0.164DataRank · unranked

1 citations

Jian Yang, Guðmar Þorleifsson, Josine L. Min, Andrew R. Wood, Keri L. Monda +27 more

Integrative analysis of sequencing and array genotype data for discovering disease associations with rare mutations

UNC Libraries(2020)10.17615/nngh-g785

Top 78%

0.104DataRank

Top 78%1 citations

D. Y. Lin, Yun Li, Paul L. Auer, Yi‐Juan Hu

Integrative analysis of microbial 16S gene and shotgun metagenomic sequencing data improves statistical efficiency

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.27.546795

N/A

0.104DataRank · unranked

1 citations

Timothy D. Read, Veronika Fedirko, Glen A. Satten, Yi‐Juan Hu, Ye Yue

Meta-analysis of Gene-Level Associations for Rare Variants Based on Single-Variant Statistics

UNC Libraries(2020)10.17615/qhxy-td18

N/A

0.104DataRank · unranked

1 citations

Kari E. North, D. Y. Lin, Andrea Ganna, Felix R. Day, Eleanor Wheeler +23 more

Testing microbiome associations with censored survival outcomes at both the community and individual taxon levels

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.11.483858

N/A

0DataRank · unranked

4 citations

Yunxiao Li, Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

Integrative analysis of relative abundance data and presence-absence data of the microbiome using the LDM

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.14.476390

N/A

0DataRank · unranked

3 citations

Glen A. Satten, Yi‐Juan Hu, Zhengyi Zhu

Extension of PERMANOVA to Testing the Mediation Effect of the Microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.26.489586

N/A

0DataRank · unranked

3 citations

Yi‐Juan Hu, Ye Yue

Testing microbiome associations with survival times at both the community and individual taxon levels

Research Square(2022)10.21203/rs.3.rs-1447430/v1

N/A

0DataRank · unranked

0 citations

Yunxiao Li, Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

Compositional analysis of microbiome data using the linear decomposition model (LDM)

Bioinformatics(2023)10.1093/bioinformatics/btad668

N/A

0DataRank · unranked

8 citations

Glen A. Satten, Yi‐Juan Hu

Unique microbial diversity, community composition, and networks among Pacific Islander endocervical and vaginal microbiomes with and without Chlamydia trachomatis infection in Fiji

mBio(2023)10.1128/mbio.03063-23

N/A

0DataRank · unranked

6 citations

Yi‐Juan Hu, Mike Kama, Ruohong Wang, Reshma Kodimerla, Kenan Jijakli +3 more

Compositional analysis of microbiome data using the linear decomposition model (LDM)

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.26.542540

N/A

0DataRank · unranked

4 citations

Glen A. Satten, Yi‐Juan Hu

Comparison of genomic diversity between single and pooled Staphylococcus aureus colonies isolated from human colonisation cultures

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.14.544959

N/A

0DataRank · unranked

2 citations

Jessica J. Gunoskey, Katrina S. Hofstetter, Natasia F Jacko, Margot J. Shumaker, Yi‐Juan Hu +3 more

Impact of experimental bias on compositional analysis of microbiome data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.08.527766

N/A

0DataRank · unranked

1 citations

Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

Integrative analysis of microbial 16S gene and shotgun metagenomic sequencing data improves statistical efficiency

Research Square(2023)10.21203/rs.3.rs-3376801/v1

N/A

0DataRank · unranked

1 citations

Timothy D. Read, Veronika Fedirko, Glen A. Satten, Yi‐Juan Hu, Ye Yue

The unique microbial diversity, community composition and networks of Pacific Islander endocervical and vaginal microbiomes in the presence or absence of Chlamydia trachomatis infection using metagenomic shotgun sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.23.546186

N/A

0DataRank · unranked

0 citations

Yi‐Juan Hu, Mike Kama, Ruohong Wang, Reshma Kodimerla, Kenan Jijakli +3 more

Gender-affirming hormone therapy preserves skeletal maturation in young mice via the gut microbiome

Journal of Clinical Investigation(2024)10.1172/jci175410

N/A

0DataRank · unranked

9 citations

Xochitl C. Morgan, Hamid Y. Dar, Camilo Anthony G. Gacasan, Sanchiti Patil, Andreea Stoica +5 more

Rectal mucosal inflammation, microbiome, and wound healing in men who have sex with men who engage in receptive anal intercourse

Scientific Reports(2024)10.1038/s41598-024-80074-1

N/A

0DataRank · unranked

4 citations

Cassie Grimsley Ackerley, Robert A. Arthur, Phillip M. Murray, S. Abigail Smith, Yi‐Juan Hu +2 more

Whole genome sequence analysis of platelet traits in the NHLBI Trans-Omics for Precision Medicine (TOPMed) initiative

UNC Libraries(2024)10.17615/8syg-6y95

Top 100%

0DataRank

Top 100%0 citations

Marsha M. Wheeler, J. D. Broome, A. Manichaikul, J. Blangero, N. Heard-Costa +62 more

Azithromycin alters the microbiome composition, function and resistome in women with Chlamydia trachomatis infections

npj Biofilms and Microbiomes(2025)10.1038/s41522-025-00858-9

N/A

0DataRank · unranked

1 citations

Olusola Olagoke, Yi‐Juan Hu, Ruohong Wang, Mike Kama, Morgan Dehdashti +4 more

Skin Microbiome, Inflammation, and Skin Toxicities in Women With Breast Cancer Receiving Moderately Hypofractionated Radiation Therapy

International Journal of Radiation Oncology*Biology*Physics(2025)10.1016/j.ijrobp.2025.02.044

N/A

0DataRank · unranked

2 citations

Claire Gong, Yi‐Juan Hu, Deborah Watkins Bruner, Mylin A. Torres, Zachary S. Buchwald +2 more

Integrative Analysis of Microbial 16S Gene and Shotgun Metagenomic Sequencing Data Improves Statistical Efficiency in Testing Differential Abundance

Journal of the American Statistical Association(2025)10.1080/01621459.2025.2516205

N/A

0DataRank · unranked

1 citations

Yicong Mao, Timothy D. Read, Veronika Fedirko, Glen A. Satten, Xuan Chen +3 more

Testing hypotheses about the microbiome using the linear decomposition model (LDM)

Bioinformatics(2020)10.1093/bioinformatics/btaa260

N/A

0DataRank · unranked

117 citations

Glen A. Satten, Yi‐Juan Hu

TestNet: A Testing Method for Inferring Microbial Networks with False Discovery Rate Control, for Clustered and Unclustered Samples

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.14.648862

N/A

0DataRank · unranked

0 citations

Mengyu He, Vanessa Van Doren, Colleen F. Kelley, Yi‐Juan Hu, Chang Su

Ex vivo rectal explant model reveals potential opposing roles of Natural Killer cells and Marginal Zone-like B cells in HIV-1 infection

Scientific Reports(2020)10.1038/s41598-020-76976-5

N/A

0DataRank · unranked

5 citations

Phillip M. Murray, Praveen K. Amancha, Cassie Grimsley Ackerley, Yi‐Juan Hu, Rama Rao Amara +2 more

One Size Doesn't Fit All - RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies

UNC Libraries(2020)10.17615/m6xz-h551

N/A

0DataRank · unranked

3 citations

Yi‐Juan Hu, Shuai Yuan, Zhaohui Qin, Guosheng Zhang, Yun Li +1 more

A Rarefaction-Based Extension of the LDM for Testing Presence-Absence Associations in the Microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.26.117879

N/A

0DataRank · unranked

0 citations

Andrea Lane, Glen A. Satten, Yi‐Juan Hu

Prospective Associations of Coronary Heart Disease Loci in African Americans Using the MetaboChip: The PAGE Study

UNC Libraries(2020)10.17615/4xdt-j376

N/A

0DataRank · unranked

0 citations

Diane M. Becker, Nobuyo Maeda, Christopher J. O’Donnell, D. Y. Lin, Alex P. Reiner +26 more

Common genetic variation in adiponectin, leptin, and leptin receptor and association with breast cancer subtypes

UNC Libraries(2020)10.17615/fp3e-2b80

N/A

0DataRank · unranked

0 citations

Robert C. Millikan, Yi‐Juan Hu, Jill S. Barnholtz‐Sloan, D. Y. Lin, Jay S. Kaufman +5 more

Genetic variation in estrogen and progesterone pathway genes and breast cancer risk: an exploration of tumor subtype-specific effects

UNC Libraries(2020)10.17615/tjvg-6k06

N/A

0DataRank · unranked

0 citations

Jill S. Barnholtz‐Sloan, Sarah J. Nyante, Jeannette T. Bensen, Marilie D. Gammon, Dan Lin +5 more

Vaginal Microbiome Composition in Early Pregnancy and Risk of Spontaneous Preterm and Early Term Birth Among African American Women

Frontiers in Cellular and Infection Microbiology(2021)10.3389/fcimb.2021.641005

N/A

0DataRank · unranked

89 citations

Glen A. Satten, Yi‐Juan Hu, Anna K. Knight, Cherie C. Hill, Michelle L. Wright +5 more

Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data

Microbiome(2021)10.1186/s40168-021-01034-9

N/A

0DataRank · unranked

34 citations

Glen A. Satten, Caroline M. Mitchell, Yi‐Juan Hu, Zhengyi Zhu

Assessing the Reproducibility of Microbiome Measurements Based on Concordance Correlation Coefficients

Journal of the Royal Statistical Society Series C (Applied Statistics)(2021)10.1111/rssc.12497

N/A

0DataRank · unranked

15 citations

Limin Peng, Yi‐Juan Hu, HuiChuan J. Lai, Ying Cui

A rarefaction-without-resampling extension of PERMANOVA for testing presence-absence associations in the microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.06.438671

N/A

0DataRank · unranked

14 citations

Glen A. Satten, Yi‐Juan Hu

A New Approach to Testing Mediation of the Microbiome using the LDM

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.12.468449

N/A

0DataRank · unranked

2 citations

Yi‐Juan Hu, Ye Yue

SMAD4 and TGFβ are architects of inverse genetic programs during fate-determination of antiviral memory CD8 T cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.16.472993

N/A

0DataRank · unranked

0 citations

Jenny E Suarez-Ramirez, Yi‐Juan Hu, Evan R. Jellison, Z. Ugur, Jun Siong Low +4 more

Use of high-resolution metabolomics to assess the biological perturbations associated with maternal exposure to Bisphenol A and Bisphenol F among pregnant African American women

Environment International(2022)10.1016/j.envint.2022.107530

N/A

0DataRank · unranked

34 citations

Youran Tan, Dana Boyd Barr, P. Barry Ryan, ViLinh Tran, Zhenjiang Li +6 more

Extension of PERMANOVA to Testing the Mediation Effect of the Microbiome

Genes(2022)10.3390/genes13060940

N/A

0DataRank · unranked

15 citations

Yi‐Juan Hu, Ye Yue

Testing microbiome associations with survival times at both the community and individual taxon levels

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010509

N/A

0DataRank · unranked

8 citations

Yunxiao Li, Glen A. Satten, Yi‐Juan Hu, Yingtian Hu

Yi‐Juan Hu

Indexed papers

Top data-sharing exemplar

Papers