🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

David Bonsall

University of Oxford

ORCID: 0000-0003-2187-0550
MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.704Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Mapping of HIV-1C Transmission Networks Reveals Extensive Spread of Viral Lineages Across Villages in Botswana Treatment-as-Prevention Trial

The Journal of Infectious Diseases(2020)10.1093/infdis/jiaa276
Top 28%
0.704DataRank
Top 28%17 citations

Melissa Zahralban-Steele, Sikhulile Moyo, Tapiwa Nkhisang, Dorcas Maruapula, Mary Fran McLane +45 more

Papers

Driven by 23 papers — median percentile 36. Top paper: “SARS-CoV-2 within-host diversity and transmission”.

SARS-CoV-2 within-host diversity and transmission

Science(2021)10.1126/science.abg0821
N/A
0.912DataRank · unranked
436 citations

Matthew Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes +32 more

Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda

Nature Microbiology(2023)10.1038/s41564-023-01530-8
N/A
0.893DataRank · unranked
27 citations

Andrea Brizzi, Ronald M. Galiwango, Robert Ssekubugu, Yu Chen, Xiaoyue Xi +31 more

Mapping of HIV-1C Transmission Networks Reveals Extensive Spread of Viral Lineages Across Villages in Botswana Treatment-as-Prevention Trial

The Journal of Infectious Diseases(2020)10.1093/infdis/jiaa276
Top 28%
0.704DataRank
Top 28%17 citations

Melissa Zahralban-Steele, Sikhulile Moyo, Tapiwa Nkhisang, Dorcas Maruapula, Mary Fran McLane +45 more

HIGH-FREQUENCY failure of combination antiretroviral therapy in paediatric HIV infection is associated with unmet maternal needs causing maternal NON-ADHERENCE

EClinicalMedicine(2020)10.1016/j.eclinm.2020.100344
N/A
0.561DataRank · unranked
41 citations

Nomonde Bengu, Rowena Fillis, Ken Sprenger, Vuyokazi Ntlantsana, Vinícius Vieira +23 more

Within-host genomics of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.28.118992
N/A
0.533DataRank · unranked
34 citations

Matthew Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes +30 more

Performance of a high-throughput next-generation sequencing method for analysis of HIV drug resistance and viral load

Journal of Antimicrobial Chemotherapy(2020)10.1093/jac/dkaa352
N/A
0.483DataRank · unranked
24 citations

David Bonsall, Vanessa Cummings, Rory Bowden, Tanya Golubchik, Mariateresa de Cesare +12 more

High prevalence of integrase mutation L74I in West African HIV-1 subtypes prior to integrase inhibitor treatment

Journal of Antimicrobial Chemotherapy(2020)10.1093/jac/dkaa033
N/A
0.470DataRank · unranked
22 citations

Steven A. Kemp, Rawlings Datir, Fati Murtala-Ibrahim, Ahmad Aliyu, Vivian Kwaghe +13 more

Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study

The Lancet Microbe(2023)10.1016/s2666-5247(23)00220-3
N/A
0.416DataRank · unranked
15 citations

Tanya Golubchik, David Bonsall, Lucie Abeler‐Dörner, Mohammed Limbada, Barry Kosloff +81 more

Two Distinct Mechanisms Leading to Loss of Virological Control in the Rare Group of Antiretroviral Therapy-Naive, Transiently Aviremic Children Living with HIV

Journal of Virology(2021)10.1128/jvi.01535-21
N/A
0.392DataRank · unranked
7 citations

Emily Adland, Nicholas E. Grayson, Anna Csala, Fa’eeda Richards, Cherrelle Dacon +8 more

Limited emergence of resistance to integrase strand transfer inhibitors (INSTIs) in ART-experienced participants failing dolutegravir-based antiretroviral therapy: a cross-sectional analysis of a Northeast Nigerian cohort

Journal of Antimicrobial Chemotherapy(2023)10.1093/jac/dkad195
N/A
0DataRank · unranked
26 citations

Ibrahim Musa Kida, Umar Abdullahi Maina, Amina Husaini Ibrahim, James Mshelia, Haruna Wisso +47 more

Virological Characterization of Critically Ill Patients With COVID-19 in the United Kingdom: Interactions of Viral Load, Antibody Status, and B.1.1.7 Infection

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab283
N/A
0DataRank · unranked
22 citations

Dung Nguyen, Marcia B. Goldberg, Jennifer Rynne, A.R. Jennings, Sarah Williams +24 more

Population dynamics of HIV drug resistance during treatment scale-up in Uganda: a population-based longitudinal study

medRxiv(2023)10.1101/2023.10.14.23297021
N/A
0DataRank · unranked
4 citations

Steven J. Reynolds, Brian Foley, Fred Nalugoda, Thomas C. Quinn, Steven A. Kemp +14 more

HIV transmission dynamics and population-wide drug resistance in rural South Africa

Research Square(2023)10.21203/rs.3.rs-3640717/v1
N/A
0DataRank · unranked
2 citations

Steven A. Kemp, Kimia Kamelian, Diego F. Cuadros, Mark T. K. Cheng, Elphas Okango +8 more

HIV transmission dynamics and population-wide drug resistance in rural South Africa

Nature Communications(2024)10.1038/s41467-024-47254-z
N/A
0DataRank · unranked
16 citations

Kimia Kamelian, Diego F. Cuadros, Vukuzazi Team, Mark T. K. Cheng, Elphas Okango +9 more

Increasing intra- and inter-subtype HIV diversity despite declining HIV incidence in Uganda

medRxiv(2024)10.1101/2024.03.14.24303990
N/A
0DataRank · unranked
2 citations

Godfrey Kigozi, Michael A. Martin, Ronald M. Galiwango, Thomas C. Quinn, Andrew D. Redd +14 more

Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study

UNC Libraries(2025)10.17615/9yce-ba10
N/A
0DataRank · unranked
0 citations

Ab Schaap, Musonda Simwinga, Matthew Hall, David Burns, PANGEA Consortium +20 more

A putative hepatitis B virus sequence motif associated with hepatocellular carcinoma in South African adults

Annals of Hepatology(2025)10.1016/j.aohep.2024.101763
N/A
0DataRank · unranked
0 citations

Anna McNaughton, Cori Campbell, Mariateresa de Cesare, Jolynne Mokaya, Sheila Lumley +13 more

Quantifying prevalence and risk factors of HIV multiple infection in Uganda from population-based deep-sequence data

PLoS Pathogens(2025)10.1371/journal.ppat.1013065
N/A
0DataRank · unranked
0 citations

Andrea Brizzi, Xiaoyue Xi, Ronald M. Galiwango, Sikhulile Moyo, Deogratius Ssemwanga +14 more

The age and sex dynamics of heterosexual HIV transmission in Zambia: an HPTN 071 (PopART) phylogenetic and modelling study

eLife(2025)10.1101/2025.05.02.25326873
N/A
0DataRank · unranked
0 citations

William J. M. Probert, Lucie Abeler‐Dörner, Chris Wymant, Francesco Di Lauro, Xiayoue Xi +20 more

Author response: The age and sex dynamics of heterosexual HIV transmission in Zambia: an HPTN 071 (PopART) phylogenetic and modelling study

(2025)10.7554/elife.107082.1.sa0
N/A
0DataRank · unranked
0 citations

William J. M. Probert, Lucie Abeler‐Dörner, Chris Wymant, Francesco Di Lauro, Xiayoue Xi +21 more

Reviewer #1 (Public review): The age and sex dynamics of heterosexual HIV transmission in Zambia: an HPTN 071 (PopART) phylogenetic and modelling study

(2025)10.7554/elife.107082.1.sa1
N/A
0DataRank · unranked
0 citations

William Probert, Lucie Abeler-Dörner, Chris Wymant, Francesco di Lauro, Xiayoue Xi +22 more

HIV-phyloTSI: Subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data

medRxiv(2022)10.1101/2022.05.15.22275117
N/A
0DataRank · unranked
9 citations

Lucie Abeler‐Dörner, Matthew Hall, Chris Wymant, David Bonsall, George MacIntyre-Cockett +44 more

The genetic architecture of HIV-1 virulence

Virus Evolution(2025)10.1093/ve/veaf057
Top 100%
0DataRank
Top 100%0 citations

Chris Wymant, Matthew Hall, Robert A. Power, Tanya Golubchik, Astrid Gall +28 more