🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Idit Kosti

University of California, San Francisco

ORCID: 0000-0003-2212-5472
Immunology and MicrobiologyMedicineComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.7Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Cross-tissue Analysis of Gene and Protein Expression in Normal and Cancer Tissues

Scientific Reports(2016)10.1038/srep24799
Top 4%
5.2DataRank
Top 4%218 citations

Nishant Jain, Dvir Aran, Atul Janardhan Butte, Marina Sirota, Idit Kosti

Papers

Driven by 19 papers — median percentile 44. Top paper: “Cross-tissue Analysis of Gene and Protein Expression in Normal and Cancer Tissues”.

Cross-tissue Analysis of Gene and Protein Expression in Normal and Cancer Tissues

Scientific Reports(2016)10.1038/srep24799
Top 4%
5.2DataRank
Top 4%218 citations

Nishant Jain, Dvir Aran, Atul Janardhan Butte, Marina Sirota, Idit Kosti

Meta-Analysis of Vaginal Microbiome Data Provides New Insights Into Preterm Birth

Frontiers in Microbiology(2020)10.3389/fmicb.2020.00476
N/A
2.3DataRank · unranked
85 citations

Svetlana Lyalina, Katherine S. Pollard, Atul Janardhan Butte, Marina Sirota, Idit Kosti

Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19

Scientific Reports(2021)10.1038/s41598-021-91625-1
N/A
0.601DataRank · unranked
54 citations

Gaia Andreoletti, Tomiko Oskotsky, Albert Vallejo-Gracia, Romel Rosales, Katharine Yu +10 more

Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101350
N/A
0.546DataRank · unranked
37 citations

Tomiko Oskotsky, Alice Tang, Alennie Roldan, Verena Chung, Connie Ha +56 more

Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth

BMC Medicine(2022)10.1186/s12916-022-02522-x
N/A
0.546DataRank · unranked
37 citations

Brian L. Le, Idit Kosti, Péter Straub, Digna Velez-Edwards, Lea K. Davis +7 more

Global endometrial DNA methylation analysis reveals insights into mQTL regulation and associated endometriosis disease risk and endometrial function

Communications Biology(2023)10.1038/s42003-023-05070-z
N/A
0.529DataRank · unranked
33 citations

Sahar Houshdaran, Idit Kosti, Nilüfer Rahmioğlu, Camran Nezhat, Allison F. Vitonis +27 more

Identifying therapeutic candidates for endometriosis through a transcriptomics-based drug repositioning approach

iScience(2024)10.1016/j.isci.2024.109388
N/A
0.498DataRank · unranked
14 citations

Arohee Bhoja, Daniel Bunis, Brian L. Le, Alice Tang, Idit Kosti +16 more

Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.23.352666
N/A
0.426DataRank · unranked
7 citations

Gaia Andreoletti, Tomiko Oskotsky, Albert Vallejo-Gracia, Romel Rosales, Katharine Yu +10 more

Target-agnostic drug prediction integrated with medical record analysis uncovers differential associations of statins with increased survival in COVID-19 patients

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011050
N/A
0.403DataRank · unranked
11 citations

Tomiko Oskotsky, Ivana Marić, Shruti Kaushal, Takako Takeda, Viktor Horváth +18 more

Dense phenotyping from electronic health records enables machine-learning-based prediction of preterm birth

medRxiv(2020)10.1101/2020.07.15.20154864
N/A
0.373DataRank · unranked
11 citations

Brian L. Le, Idit Kosti, Péter Straub, Digna R. Velez-Edwards, Lea K. Davis +7 more

VMAP: Vaginal Microbiome Atlas during Pregnancy

JAMIA Open(2024)10.1093/jamiaopen/ooae099
Top 56%
0.290DataRank
Top 56%5 citations

Tomiko Oskotsky, Boris Oskotsky, Camilla Wibrand, Alennie Roldan, Alice Tang +19 more

VMAP: Vaginal Microbiome Atlas During Pregnancy

medRxiv(2023)10.1101/2023.03.21.23286947
Top 59%
0.263DataRank
Top 59%3 citations

Tomiko Oskotsky, Boris Oskotsky, Camilla Wibrand, Alennie Roldan, Alice Tang +19 more

Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19

Research Square(2021)10.21203/rs.3.rs-333578/v1
N/A
0.241DataRank · unranked
4 citations

Gaia Andreoletti, Tomiko Oskotsky, Albert Vallejo-Gracia, Romel Rosales, Katharine Yu +10 more

Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study

Research Square(2023)10.21203/rs.3.rs-2631220/v2
N/A
0.208DataRank · unranked
3 citations

Feng Xie, J Costello, Alice Tang, Jay Liu, Tomiko Oskotsky +15 more

Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study

Research Square(2023)10.21203/rs.3.rs-2631220/v1
N/A
0.208DataRank · unranked
2 citations

Feng Xie, J Costello, Alice Tang, Jay Liu, Tomiko Oskotsky +14 more

Applying a computational transcriptomics-based drug repositioning pipeline to identify therapeutic candidates for endometriosis

medRxiv(2022)10.1101/2022.12.20.22283736
N/A
0.165DataRank · unranked
2 citations

Arohee Bhoja, Daniel Bunis, Brian L. Le, Idit Kosti, Christine Li +14 more

Whole-tissue deconvolution and scRNAseq analysis identify altered endometrial cellular compositions and functionality associated with endometriosis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.27.457966
N/A
0DataRank · unranked
5 citations

Wanxin Wang, Júlia Vallvé-Juanico, Sahar Houshdaran, Sushmita Sen, Isam Ben Soltane +6 more

Whole-Tissue Deconvolution and scRNAseq Analysis Identify Altered Endometrial Cellular Compositions and Functionality Associated With Endometriosis

Frontiers in Immunology(2022)10.3389/fimmu.2021.788315
N/A
0DataRank · unranked
32 citations

Wanxin Wang, Júlia Vallvé-Juanico, Sahar Houshdaran, Sushmita Sen, Isam Ben Soltane +6 more

Global Endometrial DNA Multi-omics Analysis Reveals Insights into mQTL Regulation and Associated Endometriosis Disease Risk

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.27.518106
N/A
0DataRank · unranked
0 citations

Sahar Houshdaran, Idit Kosti, Nilüfer Rahmioğlu, Camran Nezhat, Allison F. Vitonis +27 more