🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Anna Lipzen

Joint Genome Institute

ORCID: 0000-0003-2293-9329

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.7Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa

Genome biology(2020)10.1186/s13059-020-02162-5
Top 8%
2.9DataRank
Top 8%151 citations

Johanna Denkena, Maria Colomé‐Tatché, Yadollah Shahryary, Rashmi R. Hazarika, Jane Grimwood +20 more

Papers

Driven by 15 papers — median percentile 72. Top paper: “A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa”.

A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa

Genome biology(2020)10.1186/s13059-020-02162-5
Top 8%
2.9DataRank
Top 8%151 citations

Johanna Denkena, Maria Colomé‐Tatché, Yadollah Shahryary, Rashmi R. Hazarika, Jane Grimwood +20 more

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

Nucleic Acids Research(2023)10.1093/nar/gkad616
Top 14%
1.5DataRank
Top 14%78 citations

Christopher Plott, Md Shakhawat Hossain, John T. Lovell, Jane Grimwood, Jerry Jenkins +59 more

Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes

Science(2016)10.1126/science.aad1431
N/A
0.864DataRank · unranked
316 citations

Charles H. Haitjema, John K. Henske, Sean P. Gilmore, Diego Borges-Rivera, Anna Lipzen +14 more

A global phylogenomic analysis of the shiitake genus Lentinula

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2214076120
Top 28%
0.704DataRank
Top 28%27 citations

Byoungnam Min, Miguel A. Naranjo-Ortíz, Brian P. Looney, Zachary Konkel, Jason C. Slot +34 more

Diploid-dominant life cycles characterize the early evolution of Fungi

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2116841119
N/A
0.666DataRank · unranked
84 citations

D. Rabern Simmons, Joyce E. Longcore, Stephen J. Mondo, Kensuke Seto, Gustavo Henrique Jerônimo +23 more

JGI Plant Gene Atlas: An updateable transcriptome resource to improve structural annotations and functional gene descriptions across the plant kingdom

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.30.510380
Top 41%
0.466DataRank
Top 41%6 citations

Christopher Plott, Md Shakhawat Hossain, John T. Lovell, Jane Grimwood, Jerry Jenkins +58 more

Physiology of Highly Radioresistant Escherichia coli After Experimental Evolution for 100 Cycles of Selection

Frontiers in Microbiology(2020)10.3389/fmicb.2020.582590
N/A
0.373DataRank · unranked
11 citations

Joel Martin, Benjamin B. Minkoff, Mike T. Veling, Illissa Lancaster, Jessica Liu +8 more

The reference genome for the northeastern Pacific bull kelp, Nereocystis luetkeana

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.16.665147
Top 70%
0.165DataRank
Top 70%2 citations

Gabriel J. Montecinos, Merly Escalona, Sara Calhoun, Mohan P A Marimuthu, Oanh Kieu Nguyen +7 more

Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi

New Phytologist(2020)10.1111/nph.17160
N/A
0DataRank · unranked
82 citations

Nhu Nguyen, Rytas Vilgalys, Joske Ruytinx, Hui‐ling Liao, Sara Branco +13 more

Hydrophobins from Aspergillus mediate fungal interactions with microplastics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.05.622132
N/A
0DataRank · unranked
3 citations

Rachel Silvestri, Hanna White, Richard D. Hayes, Robert Riley, Anna Lipzen +8 more

Iron deprivation activates aboveground cell wall biosynthesis in Populus and the role of PtrbHLH011

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.28.601228
N/A
0DataRank · unranked
0 citations

Yuqiu Dai, Lin Yang, Yang Yang, Nidhi Dwivedi, D. Kumaran +7 more

Populus PtrbHLH011 Is a Transcriptional Co‐Regulator Involved in the Activation of Cell Wall Biosynthesis by Iron Deprivation

Plant Biotechnology Journal(2025)10.1111/pbi.70275
N/A
0DataRank · unranked
1 citations

Yuqiu Dai, Gen Li, Lin Yang, Yang Yang, Nidhi Dwivedi +10 more

Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies

iScience(2022)10.1016/j.isci.2022.104840
N/A
0DataRank · unranked
38 citations

Yan Wang, Stephen J. Mondo, Steven Ahrendt, William Andreopoulos, Kerrie Barry +22 more

Polyhydroxyalkanoate synthesis by Sinorhizobium meliloti drives a host-specific collapse in symbiosis with Medicago sativa

Research Square(2025)10.21203/rs.3.rs-7715224/v1
N/A
0DataRank · unranked
0 citations

G. Levin, Chinh X Luu, Natalie Visich, Scott A. Hoselton, Anna Lipzen +5 more

IMITATION SWITCH is required for normal chromatin structure and gene repression in PRC2 target domains

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2010003118
N/A
0DataRank · unranked
57 citations

Abigail J. Ameri, Aileen R. Ferraro, Yael Bar-Peled, Fangzhou Zhao, Christina L. Ethridge +9 more