Daniel Spakowicz

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesImmunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.104Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Early Changes in Lymphocyte/Monocyte Ratio on Treatment as a Prognostic Marker to Predict Overall Survival in Patients with Advanced Cancer Treated with Immune Checkpoint Inhibitors

Cancer Investigation(2025)10.1080/07357907.2025.2557004

Top 78%

0.104DataRank

Top 78%1 citations

Songzhu Zhao, Mingjia Li, Lai Wei, Marium Husain, Daniel Spakowicz +15 more

Papers

Driven by 41 papers — median percentile 11. Top paper: “Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease”.

Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease

Cell Host & Microbe(2024)10.1016/j.chom.2024.02.012

N/A

2.5DataRank · unranked

147 citations

Xiaotao Shen, Jethro S. Johnson, Daniel Spakowicz, Melissa Agnello, Wenyu Zhou +33 more

Bayesian structural time series for biomedical sensor data: A flexible modeling framework for evaluating interventions

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009303

N/A

1.2DataRank · unranked

23 citations

Daniel Spakowicz, Garrett I. Ash, Rebecca Hoyd, Rohan Ahluwalia, Andrew Zhang +13 more

Brief report: inhaled corticosteroid use and the risk of checkpoint inhibitor pneumonitis in patients with advanced cancer

Cancer Immunology Immunotherapy(2020)10.1007/s00262-020-02674-w

N/A

0.571DataRank · unranked

44 citations

Daniel Spakowicz, Songzhu Zhao, Sandip H. Patel, Andrew Johns, Madison Grogan +11 more

Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.01.577565

N/A

0.419DataRank · unranked

7 citations

Xiaotao Shen, Jethro S. Johnson, Daniel Spakowicz, Melissa Agnello, Wenyu Zhou +33 more

The new microbiome on the block: challenges and opportunities of using human tumor sequencing data to study microbes

Nature Methods(2025)10.1038/s41592-025-02807-y

N/A

0.416DataRank · unranked

15 citations

Anjun Ma, Evan Johnson, Charis Eng, Subhajyoti De, Sizun Jiang +4 more

Risk Factors for Immune Checkpoint Inhibitor Immunotherapy Toxicity Among Older Adults with Cancer

The Oncologist(2023)10.1093/oncolo/oyad097

N/A

0.406DataRank · unranked

14 citations

Mike Yang, Lai Wei, Madison Grogan, Daniel Spakowicz, Sandipkumar Patel +10 more

Latent-space embedding of expression data identifies gene signatures from sputum samples of asthmatic patients

BMC Bioinformatics(2020)10.1186/s12859-020-03785-y

N/A

0.398DataRank · unranked

9 citations

Tianxiao Li, Daniel Spakowicz, Xiting Yan, Geoffrey Chupp, Mark Gerstein +1 more

A Bioinformatics Tool for Identifying Intratumoral Microbes from the ORIEN Dataset

Cancer Research Communications(2024)10.1158/2767-9764.crc-23-0213

N/A

0.312DataRank · unranked

7 citations

Anjun Ma, Yingjie Li, Megan E. McNutt, Shiqi Zhang, Jiangjiang Zhu +27 more

Comparative analysis of the tumor microbiome, molecular profiles, and immune cell abundances by HPV status in mucosal head and neck cancers and their impact on survival

Cancer Biology & Therapy(2024)10.1080/15384047.2024.2350249

N/A

0.292DataRank · unranked

6 citations

Aastha Dhakal, Caroline E. Wheeler, Rebecca Hoyd, Malvenderjit Jagjit Singh, Vidhya Karivedu +14 more

A bioinformatics tool for identifying intratumoral microbes from the ORIEN dataset

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.541982

N/A

0.208DataRank · unranked

3 citations

Anjun Ma, Megan E. McNutt, Rebecca Hoyd, Caroline E. Wheeler, Lary A. Robinson +24 more

Epigenetic Modulation, Intratumoral Microbiome, and Immunity in Early-Onset Colorectal Cancer

Cancer Research Communications(2025)10.1158/2767-9764.crc-25-0177

N/A

0.170DataRank · unranked

2 citations

Rebecca Hoyd, Ayse S. Yilmaz, Jiangjiang Zhu, YunZhou Liu, Malvenderjit S. Jagjit Singh +31 more

Phase 1 dose escalation trial of the selective adenosine A2B antagonist PBF-1129 in patients with metastatic non-small cell lung cancer

Investigational New Drugs(2025)10.1007/s10637-025-01591-y

N/A

0.165DataRank · unranked

2 citations

Ruohan Wu, Lai Wei, Mikhail M. Dikov, Shankar Suman, Po‐Lan Su +17 more

Metabolic Dysregulation Explains the Diverse Impacts of Obesity in Males and Females with Gastrointestinal Cancers

Preprints.org(2023)10.20944/preprints202305.1657.v1

N/A

0.165DataRank · unranked

2 citations

Bowen Dong, Yali Zhang, Hua-Hsin Hsiao, Emily Isenhart, Jianmin Wang +18 more

Early Changes in Lymphocyte/Monocyte Ratio on Treatment as a Prognostic Marker to Predict Overall Survival in Patients with Advanced Cancer Treated with Immune Checkpoint Inhibitors

Cancer Investigation(2025)10.1080/07357907.2025.2557004

Top 78%

0.104DataRank

Top 78%1 citations

Songzhu Zhao, Mingjia Li, Lai Wei, Marium Husain, Daniel Spakowicz +15 more

Mean platelet volume, thrombocytosis, and survival in non-small cell lung cancer patients treated with first-line pembrolizumab alone or with chemotherapy

Cancer Immunology Immunotherapy(2023)10.1007/s00262-023-03392-9

N/A

0DataRank · unranked

11 citations

Songzhu Zhao, Gabrielle Lopez, Austin Secor, Parthib Das, Nitya Surya +19 more

Metabolic Dysregulation Explains the Diverse Impacts of Obesity in Males and Females with Gastrointestinal Cancers

International Journal of Molecular Sciences(2023)10.3390/ijms241310847

N/A

0DataRank · unranked

11 citations

Bowen Dong, Yali Zhang, Hua-Hsin Hsiao, Emily Isenhart, Jianmin Wang +18 more

Gut Microbiota Richness and Diversity Track With T Cell Aging in Healthy Adults

The Journals of Gerontology Series A(2023)10.1093/gerona/glad276

N/A

0DataRank · unranked

10 citations

Christin E. Burd, Rebecca Andridge, Stephanie J. Wilson, Michael T. Bailey, Martha A. Belury +4 more

Association of medical comorbidities and cardiovascular disease with toxicity and survival among patients receiving checkpoint inhibitor immunotherapy

Cancer Immunology Immunotherapy(2023)10.1007/s00262-023-03371-0

N/A

0DataRank · unranked

11 citations

Mike Yang, Lai Wei, Madison Grogan, Sandipkumar Patel, Mingjia Li +9 more

Deciphering the Tumor–Immune–Microbe Interactions in HPV-Negative Head and Neck Cancer

Genes(2023)10.3390/genes14081599

N/A

0DataRank · unranked

5 citations

Samuel S. Coleman, Muhammad Zaki Hidayatullah Fadlullah, Daniel Spakowicz, Christine H. Chung, Aik Choon Tan +1 more

The tumor microbiome as a predictor of outcomes in patients with metastatic melanoma treated with immune checkpoint inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.542123

N/A

0DataRank · unranked

5 citations

Samuel S. Coleman, Rebecca Hoyd, Louis Denko, Carlos H.F. Chan, Michelle L. Churchman +19 more

Exogenous Sequences in Tumors and Immune Cells (Exotic): A Tool for Estimating the Microbe Abundances in Tumor RNA-seq Data

Cancer Research Communications(2023)10.1158/2767-9764.crc-22-0435

N/A

0DataRank · unranked

18 citations

Caroline E. Wheeler, YunZhou Liu, Malvenderjit S. Jagjit Singh, Mitchell Muniak, Ning Jin +5 more

Improving combination therapies: targeting A2B-adenosine receptor to modulate metabolic tumor microenvironment and immunosuppression

JNCI Journal of the National Cancer Institute(2023)10.1093/jnci/djad091

N/A

0DataRank · unranked

29 citations

Shankar Suman, Mounika Goruganthu, Elena E. Tchekneva, Shuxiao Guan, Rajeswara Rao Arasada +28 more

The tumor microbiome reacts to hypoxia and can influence response to radiation treatment in colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.01.555936

N/A

0DataRank · unranked

2 citations

Rebecca Hoyd, McKenzie Kreamer, Caroline E. Wheeler, Dennis J. Grencewicz, Fouad Choueiry +27 more

Patterns of weight change and overall survival (OS) during first-line pembrolizumab treatment in patients with non-small cell lung cancer (NSCLC).

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.e21094

N/A

0DataRank · unranked

0 citations

Songzhu Zhao, Kenneth Chian, Hyunwoo Kwon, Nicholas Jones, Adam Khorasanchi +15 more

A Geriatric Assessment Intervention to Reduce Treatment Toxicity Among Older Adults With Advanced Lung Cancer: A Subgroup Analysis From a Cluster Randomized Controlled Trial

Frontiers in Oncology(2022)10.3389/fonc.2022.835582

N/A

0DataRank · unranked

19 citations

Mostafa Mohamed, Eva Culakova, Marie Flannery, Pooja Vibhakar, Rebecca Hoyd +7 more

The Tumor Microbiome Reacts to Hypoxia and Can Influence Response to Radiation Treatment in Colorectal Cancer

Cancer Research Communications(2024)10.1158/2767-9764.crc-23-0367

N/A

0DataRank · unranked

24 citations

Rebecca Hoyd, McKenzie Kreamer, Caroline E. Wheeler, Dennis J. Grencewicz, Fouad Choueiry +27 more

Immune checkpoint inhibitor-induced hepatitis injury: risk factors, outcomes, and impact on survival

Journal of Cancer Research and Clinical Oncology(2022)10.1007/s00432-022-04340-3

N/A

0DataRank · unranked

40 citations

Gabriel Tinoco, Songzhu Zhao, Lai Wei, Andrew Johns, Sandip Pravin Patel +14 more

Dynamic human gut microbiome and immune shifts during an immersive psychosocial intervention program

Brain Behavior and Immunity(2024)10.1016/j.bbi.2024.12.027

N/A

0DataRank · unranked

5 citations

Ariel B. Ganz, Andre Rayner, Tess Yan Cheng, Haley Oba, Benjamin Rolnik +9 more

Serum Albumin: Early Prognostic Marker of Benefit for Immune Checkpoint Inhibitor Monotherapy But Not Chemoimmunotherapy

Clinical Lung Cancer(2022)10.1016/j.cllc.2021.12.010

N/A

0DataRank · unranked

44 citations

Lai Wei, Sandip H. Patel, Gabrielle Lopez, Madison Grogan, Mingjia Li +17 more

Early changes in lymphocyte/monocyte ratio on-treatment as a prognostic marker to predict overall survival in patients with advanced cancer treated with immune checkpoint inhibitors

Research Square(2021)10.21203/rs.3.rs-758097/v1

Top 100%

0DataRank

Top 100%0 citations

Songzhu Zhao, Mingjia Li, Lai Wei, Marium Husain, Daniel Spakowicz +14 more

Proton pump inhibitor use (PPI) in patients treated with immune checkpoint inhibitors (ICI) for advanced cancer: Survival and prior therapy.

Journal of Clinical Oncology(2021)10.1200/jco.2021.39.15_suppl.2633

N/A

0DataRank · unranked

11 citations

Menglin Xu, Sandipkumar Patel, Andrew Johns, Madison Grogan, Mingjia Li +13 more

Role of insulinemic and inflammatory dietary patterns on gut microbial composition and circulating biomarkers of metabolic health among older American men

Gut Microbes(2025)10.1080/19490976.2025.2497400

N/A

0DataRank · unranked

3 citations

Ni Shi, Rebecca Hoyd, Daniel Spakowicz, Eric Orwoll, James M. Shikany +3 more

Checkpoint inhibitor immunotherapy toxicity and overall survival among older adults with advanced cancer

Journal of Geriatric Oncology(2021)10.1016/j.jgo.2021.02.002

N/A

0DataRank · unranked

42 citations

Lai Wei, Madison Grogan, Rebecca Hoyd, John F. P. Bridges, Sandipkumar Patel +12 more

Bayesian Structural Time Series for Biomedical Sensor Data: A Flexible Modeling Framework for Evaluating Interventions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.02.973677

N/A

0DataRank · unranked

4 citations

Daniel Spakowicz, Garrett I. Ash, Rebecca Hoyd, Andrew Zhang, Shaoke Lou +12 more

The Role of the Microbiome in Cancer Therapies

Hematology/Oncology Clinics of North America(2025)10.1016/j.hoc.2024.12.005

N/A

0DataRank · unranked

4 citations

Naomi E. Goldstein, Yogita Mehra, Daniel Spakowicz, Laura Chambers, Julia Chalif

Post-diagnosis dietary insulinemic potential and survival outcomes among colorectal cancer patients

BMC Cancer(2020)10.1186/s12885-020-07288-0

N/A

0DataRank · unranked

35 citations

Anne M. Noonan, Dong Hoon Lee, Mingyang Song, Steven K. Clinton, Daniel Spakowicz +6 more

Primary tumor microbiomes predict distant metastasis of colorectal cancer

npj Precision Oncology(2025)10.1038/s41698-025-01188-x

N/A

0DataRank · unranked

1 citations

Vishal Midya, Ryan Kiddle, Nicola De Jager, Shoshannah Eggers, Daniel Spakowicz +21 more

Primary tumor microbiomes predict distant metastasis of colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.02.654060

N/A

0DataRank · unranked

1 citations

Vishal Midya, Ryan Kiddle, Nicola De Jager, Shoshannah Eggers, Daniel Spakowicz +21 more

Exploratory evaluation of immunotherapy response and medication use in endometrial and cervical carcinoma

Gynecologic Oncology Reports(2025)10.1016/j.gore.2025.101782

N/A

0DataRank · unranked

0 citations

Molly Morton, Eric McLaughlin, Anna Gonzalez, Jessica Fulton, Jessica Sciuva +11 more

Early Acute Kidney Injury and Its Association With Survival in Patients With Metastatic Non‐Small‐Cell Lung Cancer Treated With Front‐Line Immunotherapy‐Based Therapies

Cancer Medicine(2025)10.1002/cam4.71058

N/A

0DataRank · unranked

0 citations

Po‐Lan Su, Songzhu Zhao, Grace Cheng, Nicholas Jones, Kenneth Chian +26 more

Survival Disparity and the Unique Genomic and Microbiome Profiles of Colon Cancer in Appalachian Kentucky

Journal of the American College of Surgeons(2025)10.1097/xcs.0000000000001299

N/A

0DataRank · unranked

0 citations

Anna M Reagan, Abu Saleh Mosa Faisal, Ryan Goettl, Chi Wang, Rebecca Hoyd +5 more

Daniel Spakowicz

Indexed papers

Top data-sharing exemplar

Papers