Thomas R. Hawn

MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 38 papers. Top paper: “Mycobacterium tuberculosis cough aerosol culture status associates with host characteristics and inflammatory profiles”.

Mycobacterium tuberculosis cough aerosol culture status associates with host characteristics and inflammatory profiles

Nature Communications(2024)10.1038/s41467-024-52122-x

N/A

0.655DataRank · unranked

17 citations

Lilian N. Njagi, Wilfred Murithi, Zipporah Mwongera, Jodi Byers, Gisella Logioia +6 more

Tuberculosis severity associates with variants and eQTLs related to vascular biology and infection-induced inflammation

PLoS Genetics(2023)10.1371/journal.pgen.1010387

N/A

0.563DataRank · unranked

16 citations

Jason D. Simmons, Hyejeong Hong, LaShaunda L. Malone, Harriet Mayanja‐Kizza, William S. Bush +5 more

HDAC3 inhibitor RGFP966 controls bacterial growth and modulates macrophage signaling during Mycobacterium tuberculosis infection

Tuberculosis(2021)10.1016/j.tube.2021.102062

N/A

0.505DataRank · unranked

28 citations

Sarah Heater, Glenna J. Peterson, Jason D. Simmons, Shawn Skerrett, Harriet Mayanja‐Kizza +4 more

T-cell deficiency and hyperinflammatory monocyte responses associate with Mycobacterium avium complex lung disease

Frontiers in Immunology(2022)10.3389/fimmu.2022.1016038

N/A

0.449DataRank · unranked

19 citations

Basilin Benson, Rebecca Kuan, Kimberly A. Dill‐McFarland, Glenna J. Peterson, Sinu Paul +12 more

Infant TB Infection Prevention Study (iTIPS): a randomised trial protocol evaluating isoniazid to prevent M. tuberculosis infection in HIV-exposed uninfected children

BMJ Open(2020)10.1136/bmjopen-2019-034308

N/A

0.426DataRank · unranked

10 citations

Barbra A. Richardson, John Kinuthia, Alex J. Warr, Elizabeth Maleche‐Obimbo, Daniel Matemo +5 more

A Randomized Controlled Trial of Isoniazid to Prevent Mycobacterium tuberculosis Infection in Kenyan Human Immunodeficiency Virus–Exposed Uninfected Infants

Clinical Infectious Diseases(2020)10.1093/cid/ciaa827

N/A

0.405DataRank · unranked

11 citations

Barbra A. Richardson, John Kinuthia, Alex J. Warr, Elizabeth Maleche‐Obimbo, Daniel Matemo +6 more

Epigenetic programming of host lipid metabolism associated with resistance to TST/IGRA conversion after exposure to Mycobacterium tuberculosis

mSystems(2024)10.1128/msystems.00628-24

N/A

0.359DataRank · unranked

8 citations

Jason D. Simmons, Glenna J. Peterson, Felicia K. Nguyen, Monica Campo, Penelope Benchek +6 more

TOLLIP Optimizes Dendritic Cell Maturation to Lipopolysaccharide and Mycobacterium tuberculosis

The Journal of Immunology(2022)10.4049/jimmunol.2200030

N/A

0.312DataRank · unranked

7 citations

Robyn Pryor, Courtney R. Plumlee, Sara Cohen, Jason D. Simmons, Alexander J. Warr +6 more

Cumulative Mycobacterium tuberculosis Infection Incidence (Measured Primarily by Tuberculin Skin Test) Among Infants With Human Immunodeficiency Virus Exposure: Observational Follow-up of an Isoniazid Prophylaxis Trial

Clinical Infectious Diseases(2022)10.1093/cid/ciac393

N/A

0.241DataRank · unranked

4 citations

Jaclyn N Escudero, Jerphason Mecha, Alex J. Warr, Barbra A. Richardson, Naziat Carimo +7 more

Epigenetic programming of host lipid metabolism associates with resistance to TST/IGRA conversion after exposure to Mycobacterium tuberculosis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.27.582348

N/A

0.165DataRank · unranked

2 citations

Jason D. Simmons, Glenna J. Peterson, Felicia K. Nguyen, Monica Campo, Penelope Benchek +6 more

Multi-omic latent variable data integration reveals multicellular structure pathways associated with resistance to tuberculin skin test (TST)/interferon gamma release assay (IGRA) conversion in Uganda

BMC Genomics(2025)10.1186/s12864-025-11407-1

N/A

0.104DataRank · unranked

1 citations

Kimberly A. Dill‐McFarland, Jason D. Simmons, Penelope Benchek, Harriet Mayanja‐Kizza, W. Henry Boom +3 more

Resistance to tuberculin skin test/interferon-gamma release assay conversion among highly TB exposed, HIV infected goldminers in South Africa

PLoS ONE(2025)10.1371/journal.pone.0318819

N/A

0.104DataRank · unranked

1 citations

Kavindhran Velen, Sibuse Ginindza, Lindiwe Nhlangulela, Salome Charalambous, Thomas R. Hawn +5 more

kimma: flexible linear mixed effects modeling with kinship covariance for RNA-seq data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.10.508946

N/A

0DataRank · unranked

4 citations

Kiana Mitchell, Sashank Batchu, R. Max Segnitz, Basilin Benson, Tomasz Janczyk +8 more

MR1-restricted T cell clonotypes are associated with ‘resistance’ to M.tuberculosis infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.12.511825

N/A

0DataRank · unranked

3 citations

Erik D. Layton, Krystle K. Q. Yu, Malisa T. Smith, Melissa S. Aguilar, Shamin Li +8 more

Peripheral blood T-cell deficiency and hyperinflammatory monocyte responses associate with MAC lung disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.25.485768

N/A

0DataRank · unranked

0 citations

Basilin Benson, Rebecca Kuan, Kimberley A. Dill-McFarland, Glenna J. Peterson, Sinu Paul +12 more

Kimma: flexible linear mixed effects modeling with kinship covariance for RNA-seq data

Bioinformatics(2023)10.1093/bioinformatics/btad279

N/A

0DataRank · unranked

32 citations

Kiana Mitchell, Sashank Batchu, R. Max Segnitz, Basilin Benson, Tomasz Janczyk +8 more

IFN-γ independent markers of Mycobacterium tuberculosis exposure among male South African gold miners

EBioMedicine(2023)10.1016/j.ebiom.2023.104678

N/A

0DataRank · unranked

28 citations

Malisa T. Smith, Deniz Cizmeci, Stephanie Fischinger, Jessica Shih-Lu Lee, Lenette L. Lu +12 more

Resistance to TST/IGRA conversion in Uganda: Heritability and Genome-Wide Association Study

EBioMedicine(2021)10.1016/j.ebiom.2021.103727

N/A

0DataRank · unranked

21 citations

Penelope Benchek, LaShaunda L. Malone, Mary Nsereko, Harriet Mayanja‐Kizza, W. Henry Boom +4 more

Mycobacterium tuberculosis-induced monocyte transcriptional responses associated with resistance to tuberculin skin test/interferon-γ release assay conversion in people with HIV

AIDS(2023)10.1097/qad.0000000000003716

N/A

0DataRank · unranked

9 citations

Kimberly A. Dill‐McFarland, Basilin Benson, Jason D. Simmons, Glenna J. Peterson, Penelope Benchek +5 more

Differentially expressed transcript isoforms associate with resistance to tuberculin skin test and interferon gamma release assay conversion

PLoS ONE(2023)10.1371/journal.pone.0284498

N/A

0DataRank · unranked

3 citations

R. Max Segnitz, Kimberly A. Dill‐McFarland, Catherine M. Stein, Glenna J. Peterson, Harriet Mayanja‐Kizza +3 more

Mycobacterium tuberculosis -dependent Monocyte Expression Quantitative Trait Loci and Tuberculosis Pathogenesis

medRxiv(2023)10.1101/2023.08.28.23294698

N/A

0DataRank · unranked

0 citations

Kimberly A. Dill‐McFarland, Jason D. Simmons, Glenna J. Peterson, Penelope Benchek, Harriet Mayanja‐Kizza +4 more

MR1-restricted T cell clonotypes are associated with “resistance” to Mycobacterium tuberculosis infection

JCI Insight(2024)10.1172/jci.insight.166505

N/A

0DataRank · unranked

20 citations

Erik D. Layton, Krystle K. Q. Yu, Malisa T. Smith, Melissa S. Aguilar, Shamin Li +10 more

Human Alveolar and Monocyte-Derived Human Macrophage Responses to Mycobacterium tuberculosis

The Journal of Immunology(2024)10.4049/jimmunol.2300885

N/A

0DataRank · unranked

17 citations

Kimberly A. Dill‐McFarland, Glenna J. Peterson, Basilin Benson, Shawn Skerrett, Thomas R. Hawn +1 more

Monocyte metabolic transcriptional programs associate with resistance to tuberculin skin test/interferon-γ release assay conversion

Journal of Clinical Investigation(2021)10.1172/jci140073

N/A

0DataRank · unranked

32 citations

Phu T. Van, Catherine M. Stein, Violet Chihota, Thobani Ntshiqa, Pholo Maenetje +16 more

Mycobacterium tuberculosis-dependent monocyte expression quantitative trait loci, cytokine production, and TB pathogenesis

Frontiers in Immunology(2024)10.3389/fimmu.2024.1359178

N/A

0DataRank · unranked

6 citations

Kimberly A. Dill‐McFarland, Jason D. Simmons, Glenna J. Peterson, Penelope Benchek, Harriet Mayanja‐Kizza +4 more

Attenuated tuberculin skin test responses associated with Mycobacterium intracellulare sputum colonization in an adolescent TB prevalence survey in Western Kenya

Tuberculosis(2024)10.1016/j.tube.2024.102514

N/A

0DataRank · unranked

0 citations

Grace Kaguthi, Jared Mecha, Thomas R. Hawn, Videlis Nduba, Lilian N. Njagi

Mobility patterns, activity locations, and tuberculosis in Nairobi, Kenya

medRxiv(2024)10.1101/2024.09.12.24313589

N/A

0DataRank · unranked

0 citations

Jane Rahedi Ong’ang’o, Richard Kiplimo, Thomas R. Hawn, Videlis Nduba, David Horné +2 more

Household contact antigen-specific TNF and IL-2 T-cell responses and impact of index case Mycobacterium tuberculosis aerosolization and HIV Co-infection

Research Square(2024)10.21203/rs.3.rs-4815117/v1

N/A

0DataRank · unranked

0 citations

Videlis Nduba, Wilfred Murithi, Zipporah Mwongera, Kennadi Cook, Jerphason Mecha +5 more

Pulmonary Tuberculosis Infectiousness of Persons Identified Through Active and Passive Case-finding in a High-burden Setting

Open Forum Infectious Diseases(2025)10.1093/ofid/ofaf077

N/A

0DataRank · unranked

6 citations

Khai Hoan Tram, Jerry S. Zifodya, Sharmila Paul, Jennifer M. Ross, Wilfred Murithi +8 more

Asymptomatic Tuberculosis in Children With Household Exposure to Mycobacterium tuberculosis

Clinical Infectious Diseases(2025)10.1093/cid/ciaf562

N/A

0DataRank · unranked

1 citations

Justin Shenje, Simon C. Mendelsohn, Angelique K. Luabeya, Michèle Tameris, Enid N Tredoux +12 more

Association of Mycobacterium tuberculosis aerosolization and HIV coinfection in the index case with T cell responses in household contacts

Scientific Reports(2025)10.1038/s41598-024-83965-5

N/A

0DataRank · unranked

1 citations

Videlis Nduba, Wilfred Murithi, Zipporah Mwongera, Kennadi Cook, Jerphason Mecha +5 more

Mycobacterium tuberculosis infection, immune activation, and risk of HIV acquisition

medRxiv(2021)10.1101/2021.12.08.21267470

N/A

0DataRank · unranked

1 citations

Jessica E. Long, Aparajita Saha, Felicia K. Nguyen, Lara L. Joudeh, Ethan Valinetz +10 more

Alveolar macrophage transcriptional signatures associated with resistance to TST/IGRA conversion following Mycobacterium tuberculosis exposure

BMC Genomics(2025)10.1186/s12864-025-12165-w

N/A

0DataRank · unranked

0 citations

Cristian Ovadiuc, Glenna J. Peterson, William Worodria, Sophie Nalukwago, Timothy Muwanguzi +8 more

Monocyte Transcriptional Responses to Mycobacterium tuberculosis Associate with Resistance to Tuberculin Skin Test and Interferon Gamma Release Assay Conversion

mSphere(2022)10.1128/msphere.00159-22

N/A

0DataRank · unranked

31 citations

Kimberly A. Dill‐McFarland, Catherine M. Stein, Phu T. Van, Violet Chihota, Thobani Ntshiqa +14 more

Tracking SARS-CoV-2 Spike Protein Mutations in the United States (2020/01 – 2021/03) Using a Statistical Learning Strategy

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.15.448495

N/A

0DataRank · unranked

8 citations

Terry P. Lybrand, Peter B. Gilbert, Thomas R. Hawn, Joshua T. Schiffer, Leonidas Stamatatos +5 more

REL and BHLHE40 Variants Are Associated with IL-12 and IL-10 Responses and Tuberculosis Risk

The Journal of Immunology(2022)10.4049/jimmunol.2100671

N/A

0DataRank · unranked

9 citations

Alex J. Warr, Andrew D. Graustein, Aparajita Saha, Sarah J. Dunstan, Nguyễn Thụy Thương Thương +21 more

Mycobacterium tuberculosis infection, immune activation, and risk of HIV acquisition

PLoS ONE(2022)10.1371/journal.pone.0267729

N/A

0DataRank · unranked

4 citations

Jessica E. Long, Aparajita Saha, Felicia K. Nguyen, Lara L. Joudeh, Ethan Valinetz +10 more

Isoniazid preventive therapy and tuberculosis transcriptional signatures in people with HIV

AIDS(2022)10.1097/qad.0000000000003262

N/A

0DataRank · unranked

1 citations

Daniel Matemo, Jill K. Gersh, Lara L. Joudeh, Simon C. Mendelsohn, Thomas J. Scriba +8 more