Pinaki Sarder

Also affiliated with University of Florida, Quantitative BioSciences, Florida College

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.3Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction

Nature Communications(2024)10.1038/s41467-024-49212-1

Top 20%

0.998DataRank

Top 20%50 citations

Kevin Nestler, Charlotte A. Nelson, Viola D’Ambrosio, Chutong Zhong, Zhongwang Li +95 more

Papers

Driven by 46 papers — median percentile 60. Top paper: “Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction”.

Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction

Nature Communications(2024)10.1038/s41467-024-49212-1

Top 20%

0.998DataRank

Top 20%50 citations

Kevin Nestler, Charlotte A. Nelson, Viola D’Ambrosio, Chutong Zhong, Zhongwang Li +95 more

Correlating Deep Learning-Based Automated Reference Kidney Histomorphometry with Patient Demographics and Creatinine

Kidney360(2023)10.34067/kid.0000000000000299

N/A

0.425DataRank · unranked

16 citations

Brandon Ginley, Jarcy Zee, Sayat Mimar, Anindya S. Paul, Sanjay Jain +9 more

PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy

eLife(2023)10.7554/elife.91260

N/A

0.259DataRank · unranked

4 citations

Khun Zaw Latt, Avi Z. Rosenberg, Briana A. Santo, Komuraiah Myakala, Yu Ishimoto +12 more

Ontology-based modeling, integration, and analysis of heterogeneous clinical, pathological, and molecular kidney data for precision medicine

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.01.587658

Top 59%

0.255DataRank

Top 59%4 citations

Laura Barisoni, Avi Z. Rosenberg, Peter N. Robinson, Alexander D. Diehl, Yichao Chen +19 more

FUSION: A web-based application for in-depth exploration of multi-omics data with brightfield histology

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.09.602778

N/A

0.208DataRank · unranked

3 citations

Ricardo Melo Ferreira, Nicholas Lucarelli, David Manthey, Suhas Kumar, Anindya S. Paul +14 more

NAD deficiency contributes to progressive kidney disease in HIV-nephropathy mice

American Journal of Physiology-Renal Physiology(2024)10.1152/ajprenal.00061.2024

N/A

0.208DataRank · unranked

3 citations

Komuraiah Myakala, Bryce A. Jones, Xiaoxin X. Wang, Shashi Shrivastav, Briana A. Santo +9 more

Computational Pathology Fusing Spatial Technologies

Clinical Journal of the American Society of Nephrology(2023)10.2215/cjn.0000000000000146

N/A

0.165DataRank · unranked

2 citations

Nicholas Lucarelli, Michael T. Eadon, Tarek M. El‐Achkar, Sanjay Jain, Pinaki Sarder +1 more

NAD metabolism modulates inflammation and mitochondria function in diabetic kidney disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.05.471273

N/A

0.107DataRank · unranked

1 citations

Xiaoxin X. Wang, Nataliia V. Shults, Bryce A. Jones, Xiaoping Yang, Avi Z. Rosenberg +19 more

PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.03.510678

N/A

0.104DataRank · unranked

1 citations

Khun Zaw Latt, Avi Z. Rosenberg, Briana A. Santo, Komuraiah Myakala, Yu Ishimoto +12 more

Correlating Deep Learning-Based Automated Reference Kidney Histomorphometry with Patient Demographics and Creatinine

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.18.541348

N/A

0.104DataRank · unranked

1 citations

Nicholas Lucarelli, Jarcy Zee, Sanjay Jain, Seung Sook Han, Luís Rodrigues +6 more

NAD metabolism modulates inflammation and mitochondria function in diabetic kidney disease

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104975

N/A

0DataRank · unranked

74 citations

Xiaoxin X. Wang, Nataliia V. Shults, Ewa Krawczyk, Bryce A. Jones, Xiaoping Yang +20 more

Joint Modeling of Clinical and Biomarker Data in Acute Kidney Injury Defines Unique Subphenotypes with Differing Outcomes

Clinical Journal of the American Society of Nephrology(2023)10.2215/cjn.0000000000000156

N/A

0DataRank · unranked

15 citations

Won-Suk Oh, Samuel Lee, Pavan K. Bhatraju, Sherry G. Mansour, Dennis G. Moledina +16 more

Discovery of Novel Digital Biomarkers for Type 2 Diabetic Nephropathy Classification via Integration of Urinary Proteomics and Pathology

medRxiv(2023)10.1101/2023.04.28.23289272

N/A

0DataRank · unranked

8 citations

Donghwan Yun, Dohyun Han, Brandon Ginley, Kyung Chul Moon, Avi Z. Rosenberg +6 more

APOL1 kidney risk variants in glomerular diseases modeled in transgenic mice

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.27.534273

N/A

0DataRank · unranked

4 citations

Khun Zaw Latt, Briana A. Santo, Shashi Shrivastav, Yongmei Zhao, Paride Fenaroli +8 more

Spatially Aware Transformer Networks for Contextual Prediction of Diabetic Nephropathy Progression from Whole Slide Images

medRxiv(2023)10.1101/2023.02.20.23286044

N/A

0DataRank · unranked

2 citations

Nicholas Lucarelli, Adish S. Rao, Donghwan Yun, Kyung Chul Moon, Seung Seok Han +2 more

Improving quantification of renal fibrosis using deep-DUET

PubMed(2023)10.1117/12.2654651

N/A

0DataRank · unranked

1 citations

Avi Z. Rosenberg, Jarcy Zee, Richard Levenson, Kuang‐Yu Jen, Pinaki Sarder +2 more

PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy

(2023)10.7554/elife.91260.1

N/A

0DataRank · unranked

1 citations

Khun Zaw Latt, Avi Z. Rosenberg, Briana A. Santo, Komuraiah Myakala, Yu Ishimoto +12 more

Reviewer #1 (Public Review): PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy

(2023)10.7554/elife.91260.1.sa1

N/A

0DataRank · unranked

0 citations

Khun Zaw Latt, Avi Z. Rosenberg, Briana A. Santo, Komuraiah Myakala, Yu Ishimoto +12 more

Investigating quantitative histological characteristics in renal pathology using HistoLens

Scientific Reports(2024)10.1038/s41598-024-68406-7

N/A

0DataRank · unranked

7 citations

John E. Tomaszewski, Teruhiko Yoshida, Jeffrey B. Kopp, Jeffrey B. Hodgin, William L. Clapp +4 more

Nascent shifts in renal cellular metabolism, structure, and function due to chronic empagliflozin in prediabetic mice

American Journal of Physiology-Cell Physiology(2024)10.1152/ajpcell.00446.2023

N/A

0DataRank · unranked

5 citations

Jennifer Chau, Ryan Kurtz, Avi Z. Rosenberg, Pinaki Sarder, Samuel P. Border +10 more

ComPRePS: an automated cloud-based image analysis tool to democratize AI in digital pathology

PubMed(2024)10.1117/12.3008469

N/A

0DataRank · unranked

6 citations

Anindya S. Paul, Nicholas Lucarelli, Samuel Border, Ahmed M. Naglah, Laura Barisoni +5 more

ComPRePS : Unlocking Scalable AI Analysis for Computational Renal Pathology

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.21.586102

N/A

0DataRank · unranked

3 citations

Luis A. Rodrigues, Suhas Katari Chaluva Kumar, David Manthey, Samuel Border, Clara Pardinhas +13 more

Reviewer #1 (Public Review): PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy

(2024)10.7554/elife.91260.2.sa1

N/A

0DataRank · unranked

0 citations

Khun Zaw Latt, Avi Z. Rosenberg, Briana A. Santo, Komuraiah Myakala, Yu Ishimoto +12 more

Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction

Figshare(2024)10.17615/x00g-jr51

N/A

0DataRank · unranked

0 citations

Keith Siew, Amanda Saravia-Butler, Fatemeh Afsari, Vaksha Patel, Zhongwang Li +95 more

Complement Proteins Identify Rapidly Progressive Diabetic Kidney Disease

Kidney International Reports(2025)10.1016/j.ekir.2025.04.061

N/A

0DataRank · unranked

6 citations

Sohyun Bae, Yuqian Gao, Lauren Lopez, Dohyun Han, Carrie Nicora +12 more

Integration of spatial protein imaging and transcriptomics in the human kidney tracks the regenerative potential of proximal tubules

Science Advances(2025)10.1126/sciadv.adv8918

N/A

0DataRank · unranked

6 citations

Angela R. Sabo, Daria Barwinska, Ricardo Melo Ferreira, Michael J. Ferkowicz, William S. Bowen +26 more

Summer Research Internship Curriculum to Promote Self-Efficacy, Researcher Identity, and Peer-to-Peer Learning: Retrospective Cohort Study

JMIR Formative Research(2025)10.2196/54167

N/A

0DataRank · unranked

5 citations

Rachel Liu‐Galvin, Samuel Border, Sara Midence, Mishal Khan, Maya VanZanten +4 more

Developing evaluation metrics to measure the US national institute of health plans to enhance diverse perspectives: a protocol for a consensus-based study

BMJ Open(2025)10.1136/bmjopen-2024-087739

N/A

0DataRank · unranked

1 citations

Sanjay Jain, Pinaki Sarder, Yulia A. Strekalova

FUSION: a web-based application for in-depth exploration of multi-omics data with brightfield histology

Nature Communications(2025)10.1038/s41467-025-63050-9

N/A

0DataRank · unranked

1 citations

Ricardo Melo Ferreira, Nicholas Lucarelli, Suhas Katari Chaluva Kumar, Anindya S. Paul, David Manthey +21 more

ComPRePS 2.0: enabling massive-scale distributed computing on high-performance computing cluster for histopathological data processing

PubMed(2025)10.1117/12.3048195

N/A

0DataRank · unranked

2 citations

Anindya S. Paul, Haitham M Abdelazim, Will Dunklin, David Manthey, Oleksandr Moskalenko +4 more

Enhancing predictive accuracy of allograft outcomes: beyond traditional clinical and biopsy scoring methods

PubMed(2025)10.1117/12.3048196

N/A

0DataRank · unranked

1 citations

Ahmed M. Naglah, Kuang‐Yu Jen, Avi Z. Rosenberg, Luís Rodrigues, William L. Clapp +5 more

CASC-AI: Consensus-aware Self-corrective Learning for Noise Cell Segmentation

arXiv (Cornell University)(2025)10.48550/arxiv.2502.07302

N/A

0DataRank · unranked

0 citations

Yihe Yang, David J. Pisapia, Benjamin Liechty, Junchao Zhu, Juming Xiong +13 more

Explainable feature embeddings from histopathology foundation models: a case study for end stage kidney disease risk analysis in diabetic nephropathy patients

PubMed(2025)10.1117/12.3047908

N/A

0DataRank · unranked

0 citations

Nicholas Lucarelli, Donghwan Yun, Kyung Chul Moon, Patricio S. La Rosa, John E. Tomaszewski +5 more

Renal cell type and state estimation in brightfield histology images: a pilot study on diabetic nephropathy

PubMed(2025)10.1117/12.3047996

N/A

0DataRank · unranked

0 citations

Samuel Border, Ahmed M. Naglah, Benjamin Shickel, Patricio S. La Rosa, John E. Tomaszewski +5 more

Shaping learning objectives for biomedical artificial intelligence: Student-centered insights into novel cell visualization technology

Journal of Clinical and Translational Science(2025)10.1017/cts.2025.10107

N/A

0DataRank · unranked

0 citations

Nicholas Sherwin, Selin Kavak, Victoria Liwang, Samuel Border, Mishal Khan +4 more

A User-Friendly Tool For Cloud-Based Whole Slide Image Segmentation, With Examples From Renal Histopathology

Research Square(2021)10.21203/rs.3.rs-712930/v1

N/A

0DataRank · unranked

8 citations

David Manthey, Jan U. Becker, Brandon Ginley, Katharina Moos, Jonathan E. Zuckerman +17 more

An Innovative Pilot Program Approach to Facilitating Interdisciplinary Collaboration Among STEM and Public Health Students in Biomedical AI and Clinical Translational Research

Biochemistry and Molecular Biology Education(2025)10.1002/bmb.70016

N/A

0DataRank · unranked

0 citations

Lakshmi Atchison, Jessica M. Ray, Samuel Border, Mishal Khan, Fatemeh Afsari +3 more

Generative modeling of histology tissue reduces human annotation effort for segmentation model development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.15.464564

N/A

0DataRank · unranked

0 citations

Pinaki Sarder, Brendon Lutnick

PodoCount: A robust, fully automated whole-slide podocyte quantification tool

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.27.441689

N/A

0DataRank · unranked

1 citations

Darshana Govind, Parnaz Daneshpajouhnejad, Xiaoping Yang, Xiaoxin X. Wang, Komuraiah Myakala +10 more

A user-friendly tool for cloud-based whole slide image segmentation, with examples from renal histopathology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.16.456524

N/A

0DataRank · unranked

1 citations

David Manthey, Jan U. Becker, Brandon Ginley, Katharina Moos, Jonathan E. Zuckerman +17 more

Structural Knowledge Transfer of Panoptic Kidney Segmentation to Other Stains, Organs, and Species

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.21.465370

N/A

0DataRank · unranked

0 citations

Kuang‐Yu Jen, Pinaki Sarder, Brandon Ginley

A user-friendly tool for cloud-based whole slide image segmentation with examples from renal histopathology

Communications Medicine(2022)10.1038/s43856-022-00138-z

N/A

0DataRank · unranked

49 citations

David Manthey, Jan U. Becker, Brandon Ginley, Katharina Moos, Jonathan E. Zuckerman +93 more

From What to Why, the Growing Need for a Focus Shift Toward Explainability of AI in Digital Pathology

Frontiers in Physiology(2022)10.3389/fphys.2021.821217

N/A

0DataRank · unranked

27 citations

Pinaki Sarder, Samuel Border

PodoCount: A Robust, Fully Automated, Whole-Slide Podocyte Quantification Tool

Kidney International Reports(2022)10.1016/j.ekir.2022.03.004

N/A

0DataRank · unranked

23 citations

Darshana Govind, Parnaz Daneshpajouhnejad, Xiaoping Yang, Xiaoxin X. Wang, Komuraiah Myakala +12 more

Variant APOL1 protein in plasma associates with larger particles in humans and mouse models of kidney injury

PLoS ONE(2022)10.1371/journal.pone.0276649

N/A

0DataRank · unranked

9 citations

Teruhiko Yoshida, Clark M. Henderson, Hannah Pflaum, Ayako McGregor, Joshua A. Lieberman +15 more

A cloud-based tool for federated segmentation of whole slide images

PubMed(2022)10.1117/12.2613502

N/A

0DataRank · unranked

0 citations

David Manthey, Jan U. Becker, Jonathan E. Zuckerman, Luís Rodrigues, Kuang‐Yu Jen +2 more

Pinaki Sarder

Indexed papers

Top data-sharing exemplar

Papers