Paul L. Bollyky

Also affiliated with Stanford University

Environmental ScienceBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 62 papers. Top paper: “A blueprint for broadly effective bacteriophage-antibiotic cocktails against bacterial infections”.

A blueprint for broadly effective bacteriophage-antibiotic cocktails against bacterial infections

Nature Communications(2024)10.1038/s41467-024-53994-9

N/A

1.8DataRank · unranked

109 citations

Qingquan Chen, Arne Echterhof, Nina Pennetzdorfer, Robert C. McBride, Niaz Banaei +4 more

Oral hymecromone decreases hyaluronan in human study participants

Journal of Clinical Investigation(2022)10.1172/jci157983

N/A

1.1DataRank · unranked

34 citations

Nadine Nagy, Riya Goel, Gernot Kaber, Sally Demirdjian, Jamie Saxena +12 more

Phage Therapy for Limb-threatening Prosthetic KneeKlebsiella pneumoniaeInfection: Case Report and In Vitro Characterization of Anti-biofilm Activity

Clinical Infectious Diseases(2020)10.1093/cid/ciaa705

N/A

0.828DataRank · unranked

249 citations

Katherine M. Caflisch, Paul L. Bollyky, Jonas D. Van Belleghem, Robin Patel, Joseph Fackler +8 more

Pf Bacteriophage and Their Impact on Pseudomonas Virulence, Mammalian Immunity, and Chronic Infections

Frontiers in Immunology(2020)10.3389/fimmu.2020.00244

N/A

0.737DataRank · unranked

135 citations

Elizabeth B. Burgener, Margie Kinnersley, Laura K. Jennings, Valery Cristina Román-Cruz, Medeea C. Popescu +11 more

Bacteriophage therapy for multidrug-resistant infections: current technologies and therapeutic approaches

Journal of Clinical Investigation(2025)10.1172/jci187996

N/A

0.668DataRank · unranked

85 citations

Gina A. Suh, Grace Cullen, Saumel Pérez-Rodríguez, Tejas Dharmaraj, Tony H. Chang +8 more

Phage diversity in cell-free DNA identifies bacterial pathogens in human sepsis cases

Nature Microbiology(2023)10.1038/s41564-023-01406-x

N/A

0.542DataRank · unranked

36 citations

Layla J. Barkal, Nikhil Ram-Mohan, Gernot Kaber, Charles Y. Chiu, Ami S. Bhatt +3 more

A review of recent advances in the use of complex metal nanostructures for biomedical applications from diagnosis to treatment

Wiley Interdisciplinary Reviews Nanomedicine and Nanobiotechnology(2024)10.1002/wnan.1959

N/A

0.494DataRank · unranked

26 citations

Katherine J. Mossburg, Allan Radaic, Katherine E. Woo, Pallavi Jonnalagadda, Yvonne L. Kapila +3 more

Targeted deletion of Pf prophages from diverse Pseudomonas aeruginosa isolates has differential impacts on quorum sensing and virulence traits

Journal of Bacteriology(2024)10.1128/jb.00402-23

N/A

0.442DataRank · unranked

18 citations

Caleb M. Schwartzkopf, Julie D. Pourtois, Elizabeth B. Burgener, Dominick R. Faith, Alex Joyce +5 more

Weekly injection of IL-2 using an injectable hydrogel reduces autoimmune diabetes incidence in NOD mice

Diabetologia(2020)10.1007/s00125-020-05314-1

N/A

0.406DataRank · unranked

14 citations

Gernot Kaber, Michael J. Kratochvil, Hedwich F. Kuipers, Shannon M. Ruppert, Koshika Yadava +6 more

Prophages are infrequently associated with antibiotic resistance in Pseudomonas aeruginosa clinical isolates

mSphere(2025)10.1128/msphere.00904-24

N/A

0.330DataRank · unranked

8 citations

Julie D. Pourtois, Naomi L. Haddock, Daisuke Furukawa, Karen Kelly, Derek F. Amanatullah +5 more

Autoimmune origin for immune checkpoint inhibitor-diabetes revealed by deep immune phenotyping of the pancreas

Journal for ImmunoTherapy of Cancer(2025)10.1136/jitc-2025-011818

N/A

0.208DataRank · unranked

3 citations

Arabella Young, Graham L. Barlow, Jennifer Smith, Irina Kusmartseva, Shen Dong +15 more

New Pseudomonas infections drive Pf phage transmission in CF airways

JCI Insight(2025)10.1172/jci.insight.188146

N/A

0.165DataRank · unranked

2 citations

Naomi L. Haddock, Aditi Gupta, Arya Khosravi, Hunter A. Martinez, Amelia K. Schmidt +10 more

Hyaluronan Accumulates in Inflamed Lymph Nodes and Promotes B‐Cell Activation

Proteoglycan Research(2025)10.1002/pgr2.70031

N/A

0.104DataRank · unranked

1 citations

Nadine Nagy, Gernot Kaber, Payton L. Marshall, Naomi L. Haddock, Everett Meyer +6 more

Filamentous bacteriophage delays healing of Pseudomonas-infected wounds

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100656

N/A

0DataRank · unranked

45 citations

Christiaan R. de Vries, Arya Khosravi, Johanna M. Sweere, Medeea C. Popescu, Qingquan Chen +24 more

Pf Bacteriophage Inhibits Neutrophil Migration in the Lung

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.12.511980

N/A

0DataRank · unranked

4 citations

Nina Pennetzdorfer, Aviv Hargil, Gernot Kaber, Paul L. Bollyky, Medeea C. Popescu

The pharmacokinetics and pharmacodynamics of 4-methylumbelliferone and its glucuronide metabolite in mice

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.18.504417

N/A

0DataRank · unranked

2 citations

Gernot Kaber, Naomi L. Haddock, Aviv Hargil, Jayakumar Rajadas, Sanjay V. Malhotra +4 more

Biochemical, Biophysical, and Immunological Characterization of Respiratory Secretions in Severe SARS-CoV-2 (COVID-19) Infections

medRxiv(2022)10.1101/2022.03.28.22272848

N/A

0DataRank · unranked

1 citations

Gernot Kaber, Sally Demirdjian, Pamela C. Cai, Elizabeth B. Burgener, Nadine Nagy +22 more

The circulating phageome reflects bacterial infections

Research Square(2022)10.21203/rs.3.rs-1931460/v1

N/A

0DataRank · unranked

1 citations

Layla J. Barkal, Nikhil Ram-Mohan, Gernot Kaber, Charles Y. Chiu, Ami S. Bhatt +3 more

Theranostic gold-in-gold cage nanoparticles enable photothermal ablation and photoacoustic imaging in biofilm-associated infection models

Journal of Clinical Investigation(2023)10.1172/jci168485

N/A

0DataRank · unranked

33 citations

Christiaan R. de Vries, Jessica C. Hsu, Ahmad Amirshaghaghi, Yuxi C. Dong, Zhi Ren +11 more

Hyaluronan in the pathogenesis of acute and post-acute COVID-19 infection

Matrix Biology(2023)10.1016/j.matbio.2023.02.001

N/A

0DataRank · unranked

25 citations

Sally Demirdjian, Naomi L. Haddock, Gernot Kaber, Hunter A. Martinez, Nadine Nagy +3 more

Rapid assessment of changes in phage bioactivity using dynamic light scattering

PNAS Nexus(2023)10.1093/pnasnexus/pgad406

N/A

0DataRank · unranked

21 citations

Michael J. Kratochvil, Julie D. Pourtois, Qingquan Chen, Maryam Hajfathalian, Aviv Hargil +15 more

Bacterial outer membrane vesicles bound to bacteriophages modulate neutrophil responses to bacterial infection

Frontiers in Cellular and Infection Microbiology(2023)10.3389/fcimb.2023.1250339

N/A

0DataRank · unranked

18 citations

Medeea C. Popescu, Naomi L. Haddock, Fannie Dupuy, Gernot Kaber, Aviv Hargil +4 more

Inhibition of hyaluronan synthesis prevents β-cell loss in obesity-associated type 2 diabetes

Matrix Biology(2023)10.1016/j.matbio.2023.09.003

N/A

0DataRank · unranked

10 citations

Gernot Kaber, Vivekananda Gupta Sunkari, Payton L. Marshall, Aviv Hargil, Hedwich F. Kuipers +9 more

Bacteriophage populations mirror those of bacterial pathogens at sites of infection

mSystems(2023)10.1128/msystems.00497-23

N/A

0DataRank · unranked

6 citations

Layla J. Barkal, Paul L. Bollyky, Naomi L. Haddock

The Extra-Islet Pancreas Supports Autoimmunity in Human Type 1 Diabetes

medRxiv(2023)10.1101/2023.03.15.23287145

N/A

0DataRank · unranked

5 citations

Christian M. Schürch, Salil S. Bhate, Darci J. Phillips, Arabella Young, S DONG +10 more

Theranostic gold in a gold cage nanoparticle for photothermal ablation and photoacoustic imaging of skin and oral infections

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.05.539604

N/A

0DataRank · unranked

3 citations

Christiaan R. de Vries, Jessica C. Hsu, Ahmad Amirshaghaghi, Yuxi C. Dong, Zhi Ren +11 more

Rapid assessment of changes in phage bioactivity using dynamic light scattering

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.02.547396

N/A

0DataRank · unranked

3 citations

Michael J. Kratochvil, Julie D. Pourtois, Qingquan Chen, Maryam Hajfathalian, Aviv Hargil +15 more

FOXP3 + regulatory T cells use heparanase to access IL-2 bound to ECM in inflamed tissues

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.26.529772

N/A

0DataRank · unranked

2 citations

Ievgen Koliesnik, Gernot Kaber, Jacqueline Kelsey Reid, Nadine Nagy, Graham L. Barlow +18 more

Targeted deletion of Pf prophages from diverse Pseudomonas aeruginosa isolates impacts quorum sensing and virulence traits

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.19.567716

N/A

0DataRank · unranked

2 citations

Caleb M. Schwartzkopf, Julie D. Pourtois, Elizabeth B. Burgener, Dominick R. Faith, Alex Joyce +5 more

Inhibition of hyaluronan synthesis prevents β-cell loss in obesity-associated type 2 diabetes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.28.530522

N/A

0DataRank · unranked

0 citations

Gernot Kaber, Vivekananda Gupta Sunkari, Payton L. Marshall, Aviv Hargil, Hedwich F. Kuipers +9 more

Engineered matrices reveal stiffness-mediated chemoresistance in patient-derived pancreatic cancer organoids

Nature Materials(2024)10.1038/s41563-024-01908-x

N/A

0DataRank · unranked

91 citations

D.H. Zhang, Carla Huerta-López, Aidan E. Gilchrist, Brad A. Krajina, Kasper Karlsson +12 more

Phage Therapy for Respiratory Infections: Opportunities and Challenges

Lung(2024)10.1007/s00408-024-00700-7

N/A

0DataRank · unranked

29 citations

Qingquan Chen, Arne Echterhof, Jonathan L. Koff, Paul L. Bollyky, Arya Khosravi

Optimized preparation pipeline for emergency phage therapy against Pseudomonas aeruginosa at Yale University

Scientific Reports(2024)10.1038/s41598-024-52192-3

N/A

0DataRank · unranked

23 citations

Alina Lee, Kaitlyn E. Kortright, Franziska Winzig, William An, Gail Stanley +11 more

The contribution of neutrophils to bacteriophage clearance and pharmacokinetics in vivo

JCI Insight(2024)10.1172/jci.insight.181309

N/A

0DataRank · unranked

16 citations

Tejas Dharmaraj, Arya Khosravi, Robert McBride, Lynn Miesel, Ju‐Hsin Chia +12 more

Regulatory T cells use heparanase to access IL-2 bound to extracellular matrix in inflamed tissue

Nature Communications(2024)10.1038/s41467-024-45012-9

N/A

0DataRank · unranked

12 citations

Ievgen Koliesnik, Gernot Kaber, Jacqueline Kelsey Reid, Nadine Nagy, Graham L. Barlow +19 more

The lysogenic filamentous Pseudomonas bacteriophage phage Pf slows mucociliary transport

PNAS Nexus(2024)10.1093/pnasnexus/pgae390

N/A

0DataRank · unranked

8 citations

Pamela C. Cai, Michael J. Kratochvil, Laura S. Rojas‐Hernandez, Nam Soo Joo, Aditi Gupta +7 more

Hymecromone Promotes Longevity and Insulin Sensitivity in Mice

Cells(2024)10.3390/cells13201727

N/A

0DataRank · unranked

5 citations

Kathryn S. Czepiel, Gernot Kaber, Darko Stefanovski, Aviv Hargil, Nina Pennetzdorfer +14 more

Pf bacteriophage is associated with decline in lung function in a longitudinal cohort of patients with cystic fibrosis and Pseudomonas airway infection

Journal of Cystic Fibrosis(2024)10.1016/j.jcf.2024.09.018

N/A

0DataRank · unranked

5 citations

Aditi Gupta, Kayo Nakano, Sophia L Gibbs, Maya E. Sommers, Arya Khosravi +8 more

The Inovirus Pf4 Triggers Antiviral Responses and Disrupts the Proliferation of Airway Basal Epithelial Cells

Viruses(2024)10.3390/v16010165

N/A

0DataRank · unranked

7 citations

Naomi L. Haddock, Elizabeth B. Burgener, Laura S. Rojas‐Hernandez, Gernot Kaber, Aviv Hargil +3 more

Dosing and Delivery of Bacteriophage Therapy In a Murine Wound Infection Model

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.07.593005

N/A

0DataRank · unranked

12 citations

Tejas Dharmaraj, Qingquan Chen, Arne Echterhof, Robert Manasherob, Lucy J. Zhang +14 more

The extra-islet pancreas supports autoimmunity in human type 1 diabetes

eLife(2024)10.7554/elife.100535

N/A

0DataRank · unranked

6 citations

Christian M. Schürch, Salil S. Bhate, Darci J. Phillips, Arabella Young, Shen Dong +10 more

A Blueprint for Broadly Effective Bacteriophage Therapy Against Bacterial Infections

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.20.590411

N/A

0DataRank · unranked

3 citations

Qingquan Chen, Arne Echterhof, Robert C. McBride, Nina Pennetzdorfer, Niaz Banaei +4 more

The contribution of neutrophils to bacteriophage clearance and pharmacokinetics in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.25.577154

N/A

0DataRank · unranked

2 citations

Tejas Dharmaraj, Robert McBride, Joel Berry, Max Hopkins, Hemaa Selvakumar +12 more

Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.10.584330

N/A

0DataRank · unranked

0 citations

Pam Cai, Tony H. Chang, Elizabeth B. Burgener, Michael J. Kratochvil, Aditi Gupta +9 more

Monocytes use protrusive forces to generate migration paths in viscoelastic collagen-based extracellular matrices

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2309772122

N/A

0DataRank · unranked

12 citations

Cole Allan, Byung Hang Ha, Aashrith Saraswathibhatla, Junqin Zhu, Dhiraj Indana +10 more

The extra-islet pancreas supports autoimmunity in human type 1 diabetes

eLife(2025)10.7554/elife.100535.3

N/A

0DataRank · unranked

8 citations

Christian M. Schürch, Salil S. Bhate, Darci J. Phillips, Arabella Young, Shen Dong +10 more

T Cell Autocrine Hyaluronan Forms Complex Structures in CD4 T Cell Cytoplasm and Plays a Critical Role in Formation of the Immune Synapse

Journal of Histochemistry & Cytochemistry(2025)10.1369/00221554251381874

N/A

0DataRank · unranked

1 citations

Michel D. Gooden, John A. Gebe, Inkyung Kang, Caroline Stefani, Gail Workman +4 more

Identification of bacteriophage DNA in human umbilical cord blood

JCI Insight(2025)10.1172/jci.insight.183123

N/A

0DataRank · unranked

1 citations

Naomi L. Haddock, Paw Mar Gay, Layla J. Barkal, Purnima Narasimhan, Nadine Martinez +3 more

Single-step monolithic chromatography efficiently purifies diverse Pseudomonas aeruginosa phages with therapeutic-grade endotoxin reduction

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636326

N/A

0DataRank · unranked

3 citations

Tejas Dharmaraj, Patrick Blankenberg, Maryam Hajfathalian, Francis G. Blankenberg, Jessica Sacher +2 more

Circulating Bacteriophage DNA Distinguishes Staphylococcal Infection From Commensal Colonization

The Journal of Arthroplasty(2025)10.1016/j.arth.2025.09.051

N/A

0DataRank · unranked

0 citations

Daisuke Furukawa, Naomi L. Haddock, Tony H. Chang, Aviv Hargil, Prerna Arora +5 more

The Role of an IL-10/Hyaluronan Axis in Dermal Wound Healing

Frontiers in Cell and Developmental Biology(2020)10.3389/fcell.2020.00636

N/A

0DataRank · unranked

100 citations

Swathi Balaji, Xinyi Wang, Umang M. Parikh, Aditya Kaul, Jamie Gilley +4 more

Hyaluronan synthesis inhibition impairs antigen presentation and delays transplantation rejection

Matrix Biology(2020)10.1016/j.matbio.2020.12.001

N/A

0DataRank · unranked

16 citations

Nadine Nagy, Gernot Kaber, Graham L. Barlow, Amrit Ramesh, Bryan J. Xie +23 more

Modulation of hyaluronan synthases and involvement of T cell-derived hyaluronan in autoimmune responses to transplanted islets

Matrix Biology Plus(2020)10.1016/j.mbplus.2020.100052

N/A

0DataRank · unranked

10 citations

Michel D. Gooden, Gail Workman, Nadine Nagy, Paul L. Bollyky, Thomas N. Wight +2 more

Phages in vaccine design and immunity; mechanisms and mysteries

Current Opinion in Biotechnology(2020)10.1016/j.copbio.2020.11.002

N/A

0DataRank · unranked

29 citations

Qingquan Chen, Sally Demirdjian, Gernot Kaber, Arya Khosravi, Dan Liu +3 more

High–molecular weight hyaluronan attenuates tubulointerstitial scarring in kidney injury

JCI Insight(2020)10.1172/jci.insight.136345

N/A

0DataRank · unranked

25 citations

Swathi Balaji, Emily Steen, Alexander Blum, Hui Li, Christina K. Chan +9 more

Biochemical and Biophysical Characterization of Respiratory Secretions in Severe SARS-CoV-2 (COVID-19) Infections

medRxiv(2020)10.1101/2020.09.11.20191692

N/A

0DataRank · unranked

18 citations

Gernot Kaber, Pamela C. Cai, Elizabeth B. Burgener, Graham L. Barlow, Mark R. Nicolls +12 more

Sustained Release of IL-2 Using an Injectable Hydrogel Prevents Autoimmune Diabetes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.15.993063

N/A

0DataRank · unranked

4 citations

Gernot Kaber, Michael J. Kratochvil, Hedwich F. Kuipers, Shannon M. Ruppert, Koshika Yadava +6 more

Hyaluronan Synthesis Inhibition Impairs Antigen Presentation and Delays Transplantation Rejection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.28.272443

N/A

0DataRank · unranked

1 citations

Nadine Nagy, Gernot Kaber, Graham L. Barlow, Amrit Ramesh, Bryan J. Xie +23 more

Congenital Heart Disease: An Immunological Perspective

Frontiers in Cardiovascular Medicine(2021)10.3389/fcvm.2021.701375

N/A

0DataRank · unranked

49 citations

Elysa Jui, Kevin Shani, Yao Ning, Jennifer P. Connell, Ravi K. Birla +5 more

Treatment with a neutrophil elastase inhibitor and ofloxacin reduces P. aeruginosa burden in a mouse model of chronic suppurative otitis media

npj Biofilms and Microbiomes(2021)10.1038/s41522-021-00200-z

N/A

0DataRank · unranked

20 citations

Lein Joseph, Bohdan B. Khomtchouk, Ali Kouhi, Solange Massa, Anping Xia +5 more

Filamentous Bacteriophages and the Competitive Interaction between Pseudomonas aeruginosa Strains under Antibiotic Treatment: a Modeling Study

mSystems(2021)10.1128/msystems.00193-21

N/A

0DataRank · unranked

14 citations

Michael J. Kratochvil, Qingquan Chen, Naomi L. Haddock, Elizabeth B. Burgener, Giulio A. De Leo +2 more

The Immune and Inflammatory Basis of Acquired Pediatric Cardiac Disease

Frontiers in Cardiovascular Medicine(2021)10.3389/fcvm.2021.701224

N/A

0DataRank · unranked

12 citations

Kavya L. Singampalli, Kevin Shani, Yao Ning, Jennifer P. Connell, Ravi K. Birla +5 more