🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

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Pengning Xu

Pengning Xu

ORCID: 0000-0003-2575-7029

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 8 papers. Top paper: “Dynamics of strand slippage in DNA hairpins formed by CAG repeats: roles of sequence parity and trinucleotide interrupts”.

Dynamics of strand slippage in DNA hairpins formed by CAG repeats: roles of sequence parity and trinucleotide interrupts

Nucleic Acids Research(2020)10.1093/nar/gkaa036

N/A

0DataRank · unranked

62 citations

Feng Pan, Christopher Roland, Celeste Sagui, Keith Weninger, Pengning Xu

Molecular conformations and dynamics of nucleotide repeats associated with neurodegenerative diseases: double helices and CAG hairpin loops

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.04.037

N/A

0DataRank · unranked

19 citations

Yuan Zhang, Pengning Xu, Viet Hoang Man, Christopher Roland, Keith Weninger +2 more

Structure, dynamics, and regulation of TRF1-TIN2-mediated trans- and cis-interactions on telomeric DNA

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.101080

N/A

0DataRank · unranked

9 citations

Parminder Kaur, Ryan Barnes, Ariana C. Detwiler, Samantha L. Sanford, Ming Liu +15 more

Inferring kinetic rate constants from single-molecule FRET trajectories – a blind benchmark of kinetic analysis tools

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.23.469671

N/A

0DataRank · unranked

4 citations

Anders Barth, Søren S.-R. Bohr, Richard Börner, Jixin Chen, Thorben Cordes +24 more

Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C)

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01105-5

N/A

0DataRank · unranked

18 citations

Kaeli A. Welsh, Derek L. Bolhuis, Ethan Paulаkonis, Raquel C. Martinez‐Chacin, Bei Liu +16 more

Frustration Between Preferred States of Complementary Trinucleotide Repeat DNA Hairpins Anticorrelates with Expansion Disease Propensity

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168086

N/A

0DataRank · unranked

12 citations

Jiahui Zhang, Feng Pan, Chelsea Mahn, Christopher Roland, Celeste Sagui +2 more

Reply to: On the statistical foundation of a recent single molecule FRET benchmark

Nature Communications(2024)10.1038/s41467-024-47734-2

N/A

0DataRank · unranked

4 citations

Anders Barth, Søren S.-R. Bohr, Richard Börner, Jixin Chen, Thorben Cordes +24 more

Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C)

UNC Libraries(2024)10.17615/xm7a-6j77

N/A

0DataRank · unranked

0 citations

Thomas Bonacci, Liying Cui, Sascha Josef Amann, William Zhang, Kaeli A. Welsh +16 more