Ryan Dale

Also affiliated with Eunice Kennedy Shriver National Institute of Child Health and Human Development

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

1.9Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An epigenome atlas of neural progenitors within the embryonic mouse forebrain

Nature Communications(2022)10.1038/s41467-022-31793-4

Top 20%

1.0DataRank

Top 20%39 citations

Joyce J. Thompson, Apratim Mitra, Dhanya Asokumar, Dongjin R. Lee, Daniel J. Lee +6 more

Papers

Driven by 38 papers — median percentile 78. Top paper: “An epigenome atlas of neural progenitors within the embryonic mouse forebrain”.

An epigenome atlas of neural progenitors within the embryonic mouse forebrain

Nature Communications(2022)10.1038/s41467-022-31793-4

Top 20%

1.0DataRank

Top 20%39 citations

Joyce J. Thompson, Apratim Mitra, Dhanya Asokumar, Dongjin R. Lee, Daniel J. Lee +6 more

Identification of cerebral spinal fluid protein biomarkers in Niemann-Pick disease, type C1

Biomarker Research(2023)10.1186/s40364-023-00448-x

N/A

0.958DataRank · unranked

28 citations

Niamh X. Cawley, Rachel Luke, Katelin E. J. Scott, Nicholas L. Johnson, Nicole Y. Farhat +9 more

Resource: A multi‐species multi‐timepoint transcriptome database and webpage for the pineal gland and retina

Journal of Pineal Research(2020)10.1111/jpi.12673

Top 23%

0.868DataRank

Top 23%22 citations

Cong Fu, Steven L. Coon, Shahar Alon, Marjan Bozinoski, Matthew Breymaier +14 more

Germline loss-of-function PAM variants are enriched in subjects with pituitary hypersecretion

Frontiers in Endocrinology(2023)10.3389/fendo.2023.1166076

N/A

0.477DataRank · unranked

23 citations

Adrian Daly, Laura C. Hernández‐Ramírez, Elisa Araldi, Christina Tatsi, Ryan Dale +25 more

Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development

Developmental Cell(2025)10.1016/j.devcel.2025.02.002

N/A

0.434DataRank · unranked

17 citations

Nina Wenzlitschke, Matthew J. Anderson, Ariel Eraso, Manon Baudic, Joyce J. Thompson +9 more

RNA–RNA interactome approaches provide in vivo evidence for a critical role of the Hfq rim face in sRNA–mRNA pairing

Nucleic Acids Research(2025)10.1093/nar/gkaf1313

N/A

0.208DataRank · unranked

3 citations

Aixia Zhang, Caroline Esnault, François De Mets, Philip P. Adams, Ryan Dale +3 more

Regulation of human development by ubiquitin chain editing of chromatin remodelers

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.23.917450

N/A

0.208DataRank · unranked

3 citations

Mohammed A. Basar, Anthony J. Asmar, Joyce J. Thompson, Hirotsugu Oda, Daniela Tiaki Uehara +24 more

In vivo profiling of the endothelium using ‘AngioTag’ zebrafish

Angiogenesis(2025)10.1007/s10456-025-09990-8

N/A

0.165DataRank · unranked

2 citations

Leah J. Greenspan, Derek Gildea, Kathryn Monzo, Gennady Margolin, Keith Ameyaw +8 more

Detection of precisely edited CRISPR/Cas9 alleles through co-introduced restriction-fragment length polymorphisms

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.20.440537

N/A

0DataRank · unranked

0 citations

Sydney Hertafeld, Yvonne Rosario, James Iben, Eric H. Chang, Ling Yi +5 more

Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages

Nature Communications(2022)10.1038/s41467-022-31938-5

N/A

0DataRank · unranked

55 citations

Daniel J. Lee, Apratim Mitra, Sarah Frail, Ryan Dale, Pedro P. Rocha +1 more

Correlation of age of onset and clinical severity in Niemann–Pick disease type C1 with lysosomal abnormalities and gene expression

Scientific Reports(2022)10.1038/s41598-022-06112-y

N/A

0DataRank · unranked

14 citations

Dawn E. Watkins‐Chow, Nicholas L. Johnson, Nicole Y. Farhat, Frances M. Platt, Ryan Dale +4 more

Enhancer–promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness

Nature Genetics(2023)10.1038/s41588-022-01295-6

N/A

0DataRank · unranked

114 citations

Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari +8 more

Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis

Nature Communications(2023)10.1038/s41467-023-41349-9

N/A

0DataRank · unranked

39 citations

Resmi Raju, Daniela M Roth, Emma Wentworth Winchester, Parna Chattaraj, Fahad Kidwai +10 more

Extensive diversity in RNA termination and regulation revealed by transcriptome mapping for the Lyme pathogen Borrelia burgdorferi

Nature Communications(2023)10.1038/s41467-023-39576-1

N/A

0DataRank · unranked

22 citations

Caroline Esnault, Daniel D. Tetreault, Ryan Dale, Gisela Storz, Philip P. Adams +1 more

Absence of TRIC-B from type XIV Osteogenesis Imperfecta osteoblasts alters cell adhesion and mitochondrial function – A multi-omics study

Matrix Biology(2023)10.1016/j.matbio.2023.06.004

N/A

0DataRank · unranked

16 citations

Apratim Mitra, Roberta Besio, Barbara Maria Contento, Ka Wai Wong, Alberta Derkyi +5 more

Characterization of serotonin‐5‐HTR1E signaling pathways and its role in cell survival

The FASEB Journal(2023)10.1096/fj.202300128r

N/A

0DataRank · unranked

5 citations

Kiersten Campbell, Xuyu Yang, Ryan Dale, Y. Peng Loh, Vinay Sharma

miRNA Expression Profiles of Mouse Round Spermatids in GRTH/DDX25-Mediated Spermiogenesis: mRNA–miRNA Network Analysis

Cells(2023)10.3390/cells12050756

N/A

0DataRank · unranked

5 citations

Raghuveer Kavarthapu, Ryan Dale, Kiersten Campbell, Fábio R. Faucz, Maria Dufau +1 more

Cerebrospinal Fluid Protein Biomarker Discovery in CLN3

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00199

N/A

0DataRank · unranked

3 citations

David E. Sleat, Kiersten Campbell, Nicholas L. Johnson, Haiyan Zheng, Christopher A. Wassif +3 more

Integrated spatiotemporal transcriptomic resolution of embryonic palate osteogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.30.534875

N/A

0DataRank · unranked

1 citations

Resmi Raju, Daniela M Roth, Parna Chattaraj, Fahad Kidwai, Fábio R. Faucz +8 more

Extensive diversity in RNA termination and regulation revealed by transcriptome mapping for the Lyme pathogen B. burgdorferi

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.04.522626

N/A

0DataRank · unranked

0 citations

Caroline Esnault, Daniel D. Tetreault, Ryan Dale, Gisela Storz, Philip P. Adams +1 more

Germline loss-of-function PAM variants are enriched in subjects with pituitary hypersecretion

medRxiv(2023)10.1101/2023.01.20.23284646

N/A

0DataRank · unranked

0 citations

Adrian Daly, Laura C. Hernández‐Ramírez, Elisa Araldi, Christina Tatsi, Ryan Dale +25 more

Characterization of serotonin-5-HTR1E signaling pathways and its role in cell survival

Research Square(2023)10.21203/rs.3.rs-2518076/v1

N/A

0DataRank · unranked

0 citations

Kiersten Campbell, Xuyu Yang, Ryan Dale, Y. Peng Loh, Vinay Sharma

Messenger RNA transport on lysosomal vesicles maintains axonal mitochondrial homeostasis and prevents axonal degeneration

Nature Neuroscience(2024)10.1038/s41593-024-01619-1

N/A

0DataRank · unranked

77 citations

Saikat Ghosh, Veronica H. Ryan, Mira Sohn, Michal Jarník, Paniz Rezvan Sangsari +5 more

Profiles of Wnt pathway gene expression during tooth morphogenesis

Frontiers in Physiology(2024)10.3389/fphys.2023.1316635

N/A

0DataRank · unranked

11 citations

Jeremie D. Oliver, Daniela M Roth, Parna Chattaraj, Fahad Kidwai, Fábio R. Faucz +5 more

Modulation of protein activity by small RNA base pairing internal to coding sequences

Molecular Cell(2025)10.1016/j.molcel.2025.03.014

N/A

0DataRank · unranked

6 citations

Miranda M Alaniz, Ekaterina Samatova, Aoshu Zhong, Caroline Esnault, Hongen Zhang +4 more

Young KRAB-zinc finger gene clusters are highly dynamic incubators of ERV-driven genetic heterogeneity in mice

Nature Communications(2025)10.1038/s41467-025-64609-2

N/A

0DataRank · unranked

3 citations

Sharaf M. Farhana, Apratim Mitra, Kevin R Costello, Dawn E. Watkins‐Chow, Glennis A. Logsdon +8 more

The hereditary spastic paraplegia type 21 (SPG21) protein is a RAB7A effector that promotes noncanonical mTORC1-catalyzed TFEB phosphorylation and cytoplasmic retention

Molecular Biology of the Cell(2025)10.1091/mbc.e25-07-0346

N/A

0DataRank · unranked

1 citations

Chad D. Williamson, Adriana E. Golding, Rui Jia, Mira Sohn, Ryan Dale +2 more

CRTAP-Null Osteoblasts Have Increased Proliferation, Protein Secretion, and Skeletal Morphogenesis Gene Expression with Downregulation of Cellular Adhesion

Cells(2025)10.3390/cells14070518

N/A

0DataRank · unranked

0 citations

Apratim Mitra, Marianne Knue, Alberta Derkyi, An Dang, Ryan Dale +2 more

RNA-RNA Interactome Approaches Provide in vivo Evidence for a Critical Role of the Hfq Rim Face in sRNA-mRNA Pairing

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.26.660752

N/A

0DataRank · unranked

0 citations

Aixia Zhang, Caroline Esnault, François De Mets, Philip P. Adams, Ryan Dale +3 more

Somatic SMAD3-activating mutations cause melorheostosis by up-regulating the TGF-β/SMAD pathway

The Journal of Experimental Medicine(2020)10.1084/jem.20191499

N/A

0DataRank · unranked

49 citations

Smita Jha, Aleksandra Ivovic, Nadja Fratzl‐Zelman, Zuoming Deng, Apratim Mitra +12 more

Early epigenetic priming of regeneration studied with a novel transgenic epigenetic reporter

10.1101/2025.04.21.649771

N/A

0DataRank · unranked

0 citations

Isabella Cisneros, Miranda Marvel, Aniket V. Gore, Kiyohito Taimatsu, Gennady Margolin +5 more

Embryonic erythropoiesis and hemoglobin switching require transcriptional repressor ETO2 to modulate chromatin organization

Nucleic Acids Research(2020)10.1093/nar/gkaa736

N/A

0DataRank · unranked

29 citations

Jennifer L. Plank-Bazinet, Ivan Krivega, Ryan Dale, Ann Dean, Xiang Guo

Regulatory roles of 5′ UTR and ORF-internal RNAs detected by 3′ end mapping

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.18.207399

N/A

0DataRank · unranked

1 citations

Gabriele Baniulyte, Caroline Esnault, Kavya Chegireddy, Navjot Singh, Molly Monge +4 more

Regulatory roles of Escherichia coli 5' UTR and ORF-internal RNAs detected by 3' end mapping

eLife(2021)10.7554/elife.62438

N/A

0DataRank · unranked

139 citations

Gabriele Baniulyte, Caroline Esnault, Kavya Chegireddy, Navjot Singh, Molly Monge +4 more

Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation

Science Advances(2021)10.1126/sciadv.abe2116

N/A

0DataRank · unranked

50 citations

Mohammed A. Basar, Anthony J. Asmar, Joyce J. Thompson, Hirotsugu Oda, Daniela Tiaki Uehara +28 more

Transcriptome of HPβCD-treated Niemann-Pick disease type C1 cells highlights GPNMB as a biomarker for therapeutics

Human Molecular Genetics(2021)10.1093/hmg/ddab194

N/A

0DataRank · unranked

24 citations

Laura L. Baxter, Dawn E. Watkins‐Chow, Nicholas L. Johnson, Cristin Davidson, S R Carlson +9 more

The role of Niemann-Pick type C2 in zebrafish embryonic development

Development(2021)10.1242/dev.194258

N/A

0DataRank · unranked

13 citations

Ana J. Johnson Escauriza, Chon‐Hwa Tsai‐Morris, Benjamin Feldman, Ryan Dale, Christopher A. Wassif +2 more

Rapid redistribution and extensive binding of NANOG and GATA6 at shared regulatory elements underlie specification of divergent cell fates

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.28.454132

N/A

0DataRank · unranked

5 citations

Daniel J. Lee, Apratim Mitra, Sarah Frail, Ryan Dale, Pedro P. Rocha +1 more

Ryan Dale

Indexed papers

Top data-sharing exemplar

Papers