Jing Yan

Also affiliated with Yale University, Quantitative BioSciences

Biochemistry, Genetics and Molecular BiologyPhysics and AstronomyMaterials ScienceEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Biofilms as self-shaping growing nematics”.

Biofilms as self-shaping growing nematics

Nature Physics(2023)10.1038/s41567-023-02221-1

N/A

1.3DataRank · unranked

40 citations

Changhao Li, Mrityunjay Kothari, Thomas Henzel, Qiuting Zhang, Jung‐Shen B. Tai +5 more

Nonuniform growth and surface friction determine bacterial biofilm morphology on soft substrates

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1919607117

N/A

0.760DataRank · unranked

158 citations

Sheng Mao, Jing Yan, Ricard Alert, Howard A. Stone, Bonnie L. Bassler +3 more

Tunable Mesoscopic Collagen Island Architectures Modulate Stem Cell Behavior

Advanced Materials(2023)10.1002/adma.202207882

N/A

0.542DataRank · unranked

36 citations

Aidan T. Cabral, Alejandro Rossello‐Martinez, Alessandro Zulli, Xiangyu Gong, Qiuting Zhang +3 more

Lipoarabinomannan mediates localized cell wall integrity during division in mycobacteria

Nature Communications(2024)10.1038/s41467-024-46565-5

N/A

0.483DataRank · unranked

24 citations

Takehiro Kado, Malavika Prithviraj, Japinder Nijjer, Jing Yan, Yasu S Morita +1 more

New Insights into Vibrio cholerae Biofilms from Molecular Biophysics to Microbial Ecology

Advances in experimental medicine and biology(2023)10.1007/978-3-031-22997-8_2

N/A

0.302DataRank · unranked

5 citations

Micah J. Ferrell, Jing Yan, Christopher M. Waters, Jung‐Shen B. Tai

Lipoarabinomannan regulates septation in Mycobacterium smegmatis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.26.534150

N/A

0.278DataRank · unranked

3 citations

Japinder Nijjer, Jing Yan, Yasu S Morita, Ian L. Sparks

Dissecting the physics of bacterial biofilms with agent-based simulations

Current Opinion in Solid State and Materials Science(2025)10.1016/j.cossms.2025.101228

N/A

0.165DataRank · unranked

2 citations

Changhao Li, Bastiaan Cockx, Danh T. Nguyen, Ying Li, Jan‐Ulrich Kreft +2 more

Mechanical forces drive a reorientation cascade leading to biofilm self-patterning

Nature Communications(2021)10.1038/s41467-021-26869-6

N/A

0DataRank · unranked

82 citations

Changhao Li, Qiuting Zhang, Haoran Lu, Sulin Zhang, Jing Yan +1 more

Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation

Physical Biology(2021)10.1088/1478-3975/abdc0e

N/A

0DataRank · unranked

98 citations

Jyot D. Antani, Pushkar P. Lele, Jing Chen, Beiyan Nan, Marco J. Kühn +37 more

Vibrio cholerae RbmB is an α-1,4-polysaccharide lyase with biofilm-disrupting activity against Vibrio polysaccharide (VPS)

PLoS Pathogens(2024)10.1371/journal.ppat.1012750

N/A

0DataRank · unranked

6 citations

Alexis Moreau, Xin Huang, Kee-Myoung Nam, Alex Hinbest, Yun Huynh +8 more

Agent-based modeling of stress anisotropy driven nematic ordering in growing biofilms

Soft Matter(2024)10.1039/d3sm01535a

N/A

0DataRank · unranked

6 citations

Japinder Nijjer, Luyi Feng, Qiuting Zhang, Jing Yan, Sulin Zhang +1 more

Comprehensive Genomic and Evolutionary Analysis of Biofilm Matrix Clusters and Proteins in the Vibrio Genus

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.19.608685

N/A

0DataRank · unranked

2 citations

Jing Yan, Rich Olson, Xiaofang Jiang, Yi‐Yan Yang

Non-disruptive matrix turnover is a conserved feature of biofilm aggregate growth in paradigm pathogenic species

mBio(2025)10.1128/mbio.03935-24

N/A

0DataRank · unranked

4 citations

Michael L. Matwichuk, Lincoln T. Lewerke, Holly M. Jacobs, Jing Yan, Matthew R. Parsek +1 more

Morphogenesis of confined biofilms: how mechanical interactions determine cellular patterning and global geometry

Soft Matter(2025)10.1039/d4sm01180e

N/A

0DataRank · unranked

3 citations

Jing Yan, Kee-Myoung Nam

Single-cell imaging reveals spontaneous phenotypic sorting and bet-hedging in developing biofilms

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.03.657734

N/A

0DataRank · unranked

1 citations

Kee-Myoung Nam, Changhao Li, Japinder Nijjer, Sulin Zhang, Christopher M. Waters +2 more

Conformations and sequence determinants in the lipid binding of an adhesive peptide derived from Vibrio cholerae biofilm

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.14.664771

N/A

0DataRank · unranked

1 citations

Ramesh Prasad, Sarvagya Saluja, Yi‐Yan Yang, Qi Yan, Sydney O. Shuster +7 more

Regulatory Plasticity and Metabolic Trade-offs Drive Adaptive Evolution of Alternative Flagellar Configurations in Pseudomonas aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.29.667523

N/A

0DataRank · unranked

0 citations

Merrill Asp, Sofia T. Rocha, Jiaqi Li, Georgia Fanouraki, Anrong Sun +7 more

Impact of a human gut microbe on Vibrio cholerae host colonization through biofilm enhancement

eLife(2022)10.7554/elife.73010

N/A

0DataRank · unranked

30 citations

Denise Chac, Meti D. Debela, Catherine Geigel, Anjali Steenhaut, Abigail Rivera Seda +9 more

Near-atomic in-situ architecture and membrane-coupled dynamics of the Vibrio cholerae sheathed flagellum

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.02.691832

N/A

0DataRank · unranked

0 citations

Jian Yue, Jin Hwan Park, Diana Valverde-Mendez, Jack M. Botting, Rajeev Kumar +6 more

Vibrio cholerae biofilms use modular adhesins with glycan-targeting and nonspecific surface binding domains for colonization

Nature Communications(2023)10.1038/s41467-023-37660-0

N/A

0DataRank · unranked

47 citations

Thomas Nero, Ranjuna Weerasekera, Katherine Matej, Alex Hinbest, Zhaowei Jiang +13 more

Searching for the Secret of Stickiness: How Biofilms Adhere to Surfaces

Frontiers in Microbiology(2021)10.3389/fmicb.2021.686793

N/A

0DataRank · unranked

72 citations

Thomas Nero, Sampriti Mukherjee, Rich Olson, Jing Yan, Zhaowei Jiang