Yun Deng

Also affiliated with University of California System, Huzhou Vocational and Technical College, West China Hospital of Sichuan University, Sichuan Cancer Hospital, Lanzhou University Second Hospital, State Key Laboratory of Biotherapy, Chengdu University of Traditional Chinese Medicine, Lanzhou University, University of California, Berkeley, Stanford University

Biochemistry, Genetics and Molecular BiologyEngineeringEarth and Planetary Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “The distribution of waiting distances in ancestral recombination graphs and its applications”.

The distribution of waiting distances in ancestral recombination graphs and its applications

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.24.424361

N/A

0DataRank · unranked

2 citations

Yun S. Song, Rasmus Nielsen, Yun Deng

The distribution of waiting distances in ancestral recombination graphs

Theoretical Population Biology(2021)10.1016/j.tpb.2021.06.003

N/A

0DataRank · unranked

45 citations

Yun S. Song, Rasmus Nielsen, Yun Deng

Evaluation of methods for estimating coalescence times using ancestral recombination graphs

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.15.468686

N/A

0DataRank · unranked

3 citations

Xinzhu Wei, Yun Deng, Andrew H. Vaughn, Rasmus Nielsen, Débora Y. C. Brandt

Evaluation of methods for estimating coalescence times using ancestral recombination graphs

Genetics(2022)10.1093/genetics/iyac044

N/A

0DataRank · unranked

75 citations

Xinzhu Wei, Yun Deng, Andrew H. Vaughn, Rasmus Nielsen, Débora Y. C. Brandt

CherryML: Scalable Maximum Likelihood Estimation of Phylogenetic Models

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.21.521328

N/A

0DataRank · unranked

1 citations

Yun Deng, Pierre Boyeau, Xingyu Li, Po‐Yen Chen, Yun S. Song +1 more

CherryML: scalable maximum likelihood estimation of phylogenetic models

Nature Methods(2023)10.1038/s41592-023-01917-9

N/A

0DataRank · unranked

15 citations

Yun Deng, Pierre Boyeau, Xingyu Li, Po‐Yen Chen, Yun S. Song +1 more

Inference and applications of ancestral recombination graphs

Nature Reviews Genetics(2024)10.1038/s41576-024-00772-4

N/A

0DataRank · unranked

65 citations

Andrew H. Vaughn, Yun Deng, Rasmus Nielsen

A previously reported bottleneck in human ancestry 900 kya is likely a statistical artifact

Genetics(2024)10.1093/genetics/iyae192

N/A

0DataRank · unranked

9 citations

Rasmus Nielsen, Yun S. Song, Yun Deng

Robust and Accurate Bayesian Inference of Genome-Wide Genealogies for Large Samples

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.16.585351

N/A

0DataRank · unranked

44 citations

Rasmus Nielsen, Yun S. Song, Yun Deng

A previously reported bottleneck in human ancestry 900 kya is likely a statistical artifact

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.01.615851

N/A

0DataRank · unranked

4 citations

Rasmus Nielsen, Yun S. Song, Yun Deng

Robust and accurate Bayesian inference of genome-wide genealogies for hundreds of genomes

Nature Genetics(2025)10.1038/s41588-025-02317-9

N/A

0DataRank · unranked

17 citations

Rasmus Nielsen, Yun S. Song, Yun Deng

A general framework for branch length estimation in Ancestral Recombination Graphs

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2504461122

N/A

0DataRank · unranked

1 citations

William S. DeWitt, Yun S. Song, Rasmus Nielsen, Yun Deng