Lisa N. Kinch

Also affiliated with Southwestern Medical Center, Southwestern Medical Center, The University of Texas Southwestern Medical Center

Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011586

Top 26%

0.763DataRank

Top 26%24 citations

Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

Papers

Driven by 35 papers — median percentile 66. Top paper: “Accurate prediction of protein structures and interactions using a three-track neural network”.

Accurate prediction of protein structures and interactions using a three-track neural network

Science(2021)10.1126/science.abj8754

N/A

1.3DataRank · unranked

5820 citations

Frank DiMaio, Ivan Anishchenko, Justas Dauparas, Sergey Ovchinnikov, Gyu Rie Lee +27 more

Marker for type VI secretion system effectors

Proceedings of the National Academy of Sciences(2014)10.1073/pnas.1406110111

N/A

0.803DataRank · unranked

211 citations

Lisa N. Kinch, David C. Trudgian, Xiaofeng Guo, John A. Klimko, Nick V. Grishin +3 more

ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011586

Top 26%

0.763DataRank

Top 26%24 citations

Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.166788

N/A

0.681DataRank · unranked

93 citations

Lisa N. Kinch, R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

PNPLA3(148M) is a gain-of-function mutation that promotes hepatic steatosis by inhibiting ATGL-mediated triglyceride hydrolysis

Journal of Hepatology(2024)10.1016/j.jhep.2024.10.048

N/A

0.621DataRank · unranked

62 citations

Sen Hong, Hannah Hudson, Nora Kory, Lisa N. Kinch, Julia Kozlitina +3 more

Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands

Scientific Reports(2024)10.1038/s41598-024-60991-x

Top 42%

0.455DataRank

Top 42%12 citations

Jing Zhang, R. Dustin Schaeffer, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

The ubiquitin E3 ligase BFAR promotes degradation of PNPLA3

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2312291121

N/A

0.425DataRank · unranked

16 citations

Haili Cheng, Yang Wang, Lisa N. Kinch, Guosheng Liang, Sen Hong +3 more

Insights into virulence: structure classification of the Vibrio parahaemolyticus RIMD mobilome

mSystems(2023)10.1128/msystems.00796-23

N/A

0.312DataRank · unranked

7 citations

R. Dustin Schaeffer, Jing Zhang, Qian Cong, Kim Orth, Nick V. Grishin +1 more

Role of two metacaspases in development and pathogenicity of the Rice Blast fungus, Magnaporthe oryzae

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.10.420794

N/A

0DataRank · unranked

0 citations

Víctor López, Lisa N. Kinch, Mariel A. Pfeifer, Hillery F. Gray, Nalleli Garcia +4 more

Genomics Reveals the Origins of Historical Specimens

Molecular Biology and Evolution(2021)10.1093/molbev/msab013

N/A

0DataRank · unranked

36 citations

Jinhui Shen, Jing Zhang, Wenlin Li, Lisa N. Kinch, John V. Calhoun +3 more

Role of Two Metacaspases in Development and Pathogenicity of the Rice Blast Fungus Magnaporthe oryzae

mBio(2021)10.1128/mbio.03471-20

N/A

0DataRank · unranked

29 citations

Víctor López, Lisa N. Kinch, Mariel A. Pfeifer, Hillery F. Gray, Nalleli Garcia +4 more

A combined RAD-Seq and WGS approach reveals the genomic basis of yellow color variation in bumble bee Bombus terrestris

Scientific Reports(2021)10.1038/s41598-021-87194-y

N/A

0DataRank · unranked

12 citations

Jonathan Cnaani, Lisa N. Kinch, Nick V. Grishin, Heather M. Hines, Sarthok Rasique Rahman

Assessment of domain interactions in the fourteenth round of the Critical Assessment of Structure Prediction (CASP14)

Proteins Structure Function and Bioinformatics(2021)10.1002/prot.26225

N/A

0DataRank · unranked

13 citations

Lisa N. Kinch, Andriy Kryshtafovych, Nick V. Grishin, R. Dustin Schaeffer

Manipulation of IRE1-Dependent MAPK Signaling by a Vibrio Agonist-Antagonist Effector Pair

mSystems(2021)10.1128/msystems.00872-20

N/A

0DataRank · unranked

8 citations

Amanda K. Casey, Mohammed Kanchwala, Alexander E. Lafrance, Fatma S. Coskun, Lisa N. Kinch +4 more

Pseudomonas syringae effector AvrE associates with plant membrane nanodomains and binds phosphatidylinositides i n vitro

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451616

N/A

0DataRank · unranked

2 citations

Lisa N. Kinch, Boying Cai, Bradley C. Paasch, Brian H. Kvitko, Nick V. Grishin +2 more

Structure, lipid scrambling activity and role in autophagosome formation of ATG9A

Nature Structural & Molecular Biology(2020)10.1038/s41594-020-00520-2

N/A

0DataRank · unranked

316 citations

Hayashi Yamamoto, Lisa N. Kinch, Christina Garza, Satoru Takahashi, Chinatsu Otomo +5 more

Co-Component Signal Transduction Systems: fast-evolving virulence regulation cassettes discovered in enteric bacteria

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.08.487670

N/A

0DataRank · unranked

0 citations

Qian Cong, Jananee Jaishankar, Kim Orth, Lisa N. Kinch

Enzymatic Specificity of Conserved Rho GTPase Deamidases Promotes Invasion of Vibrio parahaemolyticus at the Expense of Infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.13.496033

N/A

0DataRank · unranked

0 citations

Suneeta Chimalapati, Nalleli Garcia, Lisa N. Kinch, Karan Gautam Kaval, Kim Orth +1 more

Classification of domains in predicted structures of the human proteome

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2214069120

N/A

0DataRank · unranked

44 citations

Jing Zhang, Lisa N. Kinch, Jimin Pei, Qian Cong, Nick V. Grishin +1 more

Molecular determinants for differential activation of the bile acid receptor from the pathogen Vibrio parahaemolyticus

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104591

N/A

0DataRank · unranked

18 citations

Lisa N. Kinch, Suneeta Chimalapati, Nalleli Garcia, Diana R. Tomchick, Kim Orth +1 more

ZNF692 organizes a hub specialized in 40S ribosomal subunit maturation enhancing translation in rapidly proliferating cells

Cell Reports(2023)10.1016/j.celrep.2023.113280

N/A

0DataRank · unranked

12 citations

Yi‐Heng Hao, Chunhui Jiang, Seoyeon Jang, Tsung-Cheng Chang, Isabella N. Brown +16 more

Genetic and Microbial Analysis of Invasiveness for Escherichia coli Strains Associated With Inflammatory Bowel Disease

Cellular and Molecular Gastroenterology and Hepatology(2024)10.1016/j.jcmgh.2024.101451

N/A

0DataRank · unranked

4 citations

Jing Zhang, Lisa N. Kinch, Jinhui Shen, Sydney Field, Shahanshah Khan +7 more

FicD sensitizes cellular response to glucose fluctuations in mouse embryonic fibroblasts

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2400781121

N/A

0DataRank · unranked

2 citations

Aubrie Blevins, Lisa N. Kinch, Kelly A. Servage, Nathan Stewart, Hillery F. Gray +3 more

Assessing predictions on fitness effects of missense variants in HMBS in CAGI6

Human Genetics(2024)10.1007/s00439-024-02680-3

N/A

0DataRank · unranked

2 citations

Lisa N. Kinch, Panagiotis Katsonis, Olivier Lichtarge, Milind Jagota, Yun S. Song +26 more

Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.30.577995

N/A

0DataRank · unranked

0 citations

Jing Zhang, R. Dustin Schaeffer, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

Genetic and microbial analysis of invasiveness for Escherichia coli strains associated with inflammatory bowel disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.23.613251

N/A

0DataRank · unranked

0 citations

Jing Zhang, Lisa N. Kinch, Jinhui Shen, Sydney Field, Jan‐Michael A. Klapproth +6 more

A critical role for Vibrio parahaemolyticus LPS to mediate evasion of host immune response during infection

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2426547122

N/A

0DataRank · unranked

3 citations

Hyojik Yang, Ian P. O’Keefe, Brandon M Tenaglia, Lisa N. Kinch, Robert K. Ernst +2 more

Enzymatic Specificity of Conserved Rho GTPase Deamidases Promotes Invasion of Vibrio parahaemolyticus at the Expense of Infection

mBio(2022)10.1128/mbio.01629-22

N/A

0DataRank · unranked

1 citations

Suneeta Chimalapati, Nalleli Garcia, Lisa N. Kinch, Karan Gautam Kaval, Kim Orth +1 more

β‐Strand ‐mediated interactions of protein domains

Proteins Structure Function and Bioinformatics(2020)10.1002/prot.25970

N/A

0DataRank · unranked

5 citations

Lisa N. Kinch, Nick V. Grishin, Archana Bhat

Mutation severity spectrum of rare alleles in the human genome is predictive of disease type

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007775

N/A

0DataRank · unranked

22 citations

Lisa N. Kinch, Zbyszek Otwinowski, Nick V. Grishin, Jimin Pei

Schnyder corneal dystrophy-associated UBIAD1 is defective in MK-4 synthesis and resists autophagy-mediated degradation

Journal of Lipid Research(2020)10.1194/jlr.ra119000551

N/A

0DataRank · unranked

21 citations

Marc Schumacher, Seonghwan Hwang, Lisa N. Kinch, Nick V. Grishin, Russell A. DeBose‐Boyd +1 more

Recent advances suggest increased influence of selective pressure in allostery

Current Opinion in Structural Biology(2020)10.1016/j.sbi.2020.02.004

N/A

0DataRank · unranked

18 citations

R. Dustin Schaeffer, Lisa N. Kinch, Kirill E. Medvedev, Nick V. Grishin, Archana Bhat

Manipulation of IRE1-dependent MAPK signaling by a Vibrio agonist-antagonist effector pair

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.278937

N/A

0DataRank · unranked

3 citations

Amanda K. Casey, Mohammed Kanchwala, Alexander E. Lafrance, Fatma S. Coskun, Lisa N. Kinch +4 more

Structures of an intact yeast V-ATPase alone and in complex with bacterial effector VopQ

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.16.207225

N/A

0DataRank · unranked

0 citations

Jessie Fernandez, Amanda K. Casey, Lisa N. Kinch, Diana R. Tomchick, Kim Orth +1 more

A combined RAD-Seq and WGS approach reveals the genomic basis of yellow color variation in bumble bee Bombus terrestris

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.248740

N/A

0DataRank · unranked

0 citations

Jonathan Cnaani, Lisa N. Kinch, Nick V. Grishin, Heather M. Hines, Sarthok Rasique Rahman

Lisa N. Kinch

Indexed papers

Top data-sharing exemplar

Papers