Michael A. Fischbach

Chan Zuckerberg Initiative (United States)

Also affiliated with Stanford University

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 39 papers. Top paper: “Diet rapidly and reproducibly alters the human gut microbiome”.

Diet rapidly and reproducibly alters the human gut microbiome

Nature(2013)10.1038/nature12820

N/A

1.4DataRank · unranked

10056 citations

Corinne F. Maurice, Rachel N. Carmody, David B. Gootenberg, Julie E. Button, Benjamin E. Wolfe +8 more

Prognostic Value of Gut Microbe-Generated Metabolite Phenylacetylglutamine in Patients with Heart Failure

European Journal of Heart Failure(2023)10.1002/ejhf.3111

N/A

1.0DataRank · unranked

40 citations

Ina Nemet, Xinmin S. Li, Yuping Wu, Arash Haghikia, Marco Witkowski +10 more

Dysbiosis-Induced Secondary Bile Acid Deficiency Promotes Intestinal Inflammation

Cell Host & Microbe(2020)10.1016/j.chom.2020.01.021

N/A

1.0DataRank · unranked

816 citations

Yeneneh Haileselassie, Linh P. Nguyen, Carolina Tropini, Min Wang, Laren Becker +10 more

A Cardiovascular Disease-Linked Gut Microbial Metabolite Acts via Adrenergic Receptors

Cell(2020)10.1016/j.cell.2020.02.016

N/A

0.985DataRank · unranked

709 citations

Prasenjit Prasad Saha, Nilaksh Gupta, Weifei Zhu, Kymberleigh A. Romano, Sarah M. Skye +14 more

CRISPR-based functional genomics in human dendritic cells

eLife(2021)10.7554/elife.65856

N/A

0.917DataRank · unranked

27 citations

Amy N. Jacobson, Jeffrey A. Hussmann, Giana Cirolia, Michael A. Fischbach, Jonathan S. Weissman +1 more

Role of dietary fiber in the recovery of the human gut microbiome and its metabolome

Cell Host & Microbe(2021)10.1016/j.chom.2020.12.012

N/A

0.863DataRank · unranked

315 citations

Kyle Bittinger, Yuan Gao, Elliot S. Friedman, Lisa Nessel, Unmesha Roy Paladhi +11 more

gutSMASH predicts specialized primary metabolic pathways from the human gut microbiota

Nature Biotechnology(2023)10.1038/s41587-023-01675-1

N/A

0.727DataRank · unranked

126 citations

Hannah E. Augustijn, Lianmin Chen, Alexandra Zhernakova, Jingyuan Fu, Michael A. Fischbach +3 more

Impact of a 7-day homogeneous diet on interpersonal variation in human gut microbiomes and metabolomes

Cell Host & Microbe(2022)10.1016/j.chom.2022.05.003

N/A

0.617DataRank · unranked

60 citations

Sean P. Spencer, Dalia Perelman, Will Van Treuren, Shuo Han, Feiqiao B. Yu +5 more

Gut microbe-generated phenylacetylglutamine is an endogenous allosteric modulator of β2-adrenergic receptors

Nature Communications(2024)10.1038/s41467-024-50855-3

N/A

0.553DataRank · unranked

39 citations

Valentin Gogonea, Wendy E. Sweet, Maradumane L. Mohan, Khuraijam Dhanachandra Singh, James T. Anderson +13 more

Mapping the T cell repertoire to a complex gut bacterial community

10.1101/2022.05.04.490632

N/A

0.406DataRank · unranked

14 citations

Aishan Zhao, Katayoon Atabakhsh, Allison Weakley, Sunit Jain, Xiandong Meng +7 more

Systematic identification and characterization of regulators of aryl hydrocarbon receptor signaling

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.15.676391

N/A

0.104DataRank · unranked

1 citations

Kushaal Desai, Yufang Ding, Xingren Wang, Minwoo Bae, Seth Rakoff-Nahoum +4 more

Systematic dissection of a complex gut bacterial community

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.15.448618

N/A

0DataRank · unranked

11 citations

Andrés Aranda-Díaz, Sunit Jain, Feiqiao B. Yu, Mikhail Iakiviak, Xiandong Meng +8 more

Impact of a 7-day homogeneous diet on interpersonal variation in human gut microbiomes and metabolomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.29.465965

N/A

0DataRank · unranked

10 citations

Sean P. Spencer, Dalia Perelman, Will Van Treuren, Shuo Han, Feiqiao B. Yu +5 more

In vivo augmentation of a complex gut bacterial community

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.15.448620

N/A

0DataRank · unranked

9 citations

Po-Yi Ho, Sunit Jain, Xiandong Meng, Min Wang, Feiqiao B. Yu +14 more

Design, construction, and in vivo augmentation of a complex gut microbiome

Cell(2022)10.1016/j.cell.2022.08.003

N/A

0DataRank · unranked

275 citations

Po-Yi Ho, Andrés Aranda-Díaz, Sunit Jain, Feiqiao B. Yu, Xiandong Meng +19 more

Two distinct gut microbial pathways contribute to meta-organismal production of phenylacetylglutamine with links to cardiovascular disease

Cell Host & Microbe(2022)10.1016/j.chom.2022.11.015

N/A

0DataRank · unranked

149 citations

Mohammed Dwidar, Ina Nemet, Jennifer A. Buffa, Naseer Sangwan, Xinmin S. Li +14 more

The gutSMASH web server: automated identification of primary metabolic gene clusters from the gut microbiota

Nucleic Acids Research(2021)10.1093/nar/gkab353

N/A

0DataRank · unranked

64 citations

Jorge Roel‐Touris, Dylan Dodd, Michael A. Fischbach, Marnix H. Medema, Victòria Andreu

Gut commensal bacteria enhance pathogenesis of a tumorigenic murine retrovirus

Cell Reports(2022)10.1016/j.celrep.2022.111341

N/A

0DataRank · unranked

8 citations

Aly A. Khan, Sophie Lara, Kelly O’Grady, Jessica Wilks, Sandeep Gurbuxani +6 more

Gut commensal bacteria enhance pathogenesis of a tumorigenic murine retrovirus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.02.478820

N/A

0DataRank · unranked

3 citations

Sophie Lara, Aly A. Khan, Kelly O’Grady, Jessica Wilks, Sandeep Gurbuxani +6 more

Engineered skin bacteria induce antitumor T cell responses against melanoma

Science(2023)10.1126/science.abp9563

N/A

0DataRank · unranked

186 citations

Djenet Bousbaine, Alessandra Veinbachs, Katayoon Atabakhsh, Alex Dimas, Victor K. Yu +6 more

Endogenous retroviruses promote homeostatic and inflammatory responses to the microbiota

Cell(2021)10.1016/j.cell.2021.05.020

N/A

0DataRank · unranked

199 citations

Siddharth R. Krishnamurthy, Nicolas Bouladoux, Nicholas Collins, Seong‐Ji Han, Erin Chen +15 more

Atlas of gut microbe-derived products from aromatic amino acids and risk of cardiovascular morbidity and mortality

European Heart Journal(2023)10.1093/eurheartj/ehad333

N/A

0DataRank · unranked

122 citations

Xinmin S. Li, Arash Haghikia, Lin Li, Jennifer Wilcox, Kymberleigh A. Romano +11 more

Strain dropouts reveal interactions that govern the metabolic output of the gut microbiome

Cell(2023)10.1016/j.cell.2023.05.037

N/A

0DataRank · unranked

80 citations

Lucas J. Osborn, Sunit Jain, Xiandong Meng, Allison M. Weakley, Yan Jia +17 more

Mapping the T cell repertoire to a complex gut bacterial community

Nature(2023)10.1038/s41586-023-06431-8

N/A

0DataRank · unranked

79 citations

Aishan Zhao, Katayoon Atabakhsh, Minwoo Bae, Jamie Blum, Allison M. Weakley +12 more

A metabolomics pipeline for the mechanistic interrogation of the gut microbiome

Nature(2021)10.1038/s41586-021-03707-9

N/A

0DataRank · unranked

428 citations

Will Van Treuren, Curt R. Fischer, Bryan D. Merrill, Brian C. DeFelice, Juan M. Sánchez +7 more

Microbe-derived uremic solutes enhance thrombosis potential in the host

mBio(2023)10.1128/mbio.01331-23

N/A

0DataRank · unranked

20 citations

Masanori Funabashi, Xinmin S. Li, Mohammed Dwidar, Naseer Sangwan, Sarah M. Skye +11 more

Retroviral Infection and Commensal Bacteria Dependently Alter the Metabolomic Profile in a Sterile Organ

Viruses(2023)10.3390/v15020386

N/A

0DataRank · unranked

2 citations

Vera Beilinson, Brian C. DeFelice, Juan M. Sánchez, Michael A. Fischbach, Alexander V. Chervonsky +2 more

Identification of human skin microbiome odorants that manipulate mosquito landing behavior

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.19.553996

N/A

0DataRank · unranked

3 citations

Omid Jamshidi, Robyn Raban, Katayoon Atabakhsh, Joseph A. Merriman, Michael A. Fischbach +2 more

Retroviral infection and commensal bacteria dependently alter the metabolomic profile in a sterile organ

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.10.523497

N/A

0DataRank · unranked

0 citations

Vera Beilinson, Brian C. DeFelice, Juan M. Sánchez, Michael A. Fischbach, Alexander V. Chervonsky +2 more

Production of deoxycholic acid by low-abundant microbial species is associated with impaired glucose metabolism

Nature Communications(2024)10.1038/s41467-024-48543-3

N/A

0DataRank · unranked

58 citations

Ariel R. Brumbaugh, Wilhelm Sjöland, Lisa Olsson, Hao Wu, Marcus Henricsson +8 more

Discovery and engineering of the antibody response to a prominent skin commensal

Nature(2024)10.1038/s41586-024-08489-4

N/A

0DataRank · unranked

44 citations

Katherine D. Bauman, Y. Erin Chen, Pranav V. Lalgudi, Tam T. D. Nguyen, Joyce M. Swenson +24 more

Bacterially Derived Tryptamine Increases Mucus Release by Activating a Host Receptor in a Mouse Model of Inflammatory Bowel Disease

iScience(2020)10.1016/j.isci.2020.101798

N/A

0DataRank · unranked

73 citations

Si Jie, David R. Linden, Sayak Ghatak, Ruben A. Mars, Brianna B. Williams +7 more

Comprehensive Clinical and Genetic Analyses of Circulating Bile Acids and Their Associations With Diabetes and Its Indices

Diabetes(2024)10.2337/db23-0676

N/A

0DataRank · unranked

10 citations

Deepthi P. Mallela, James R. Hilser, Jaana Hartiala, Ina Nemet, Valentin Gogonea +7 more

Discovery and engineering of the antibody response against a prominent skin commensal

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.23.576900

N/A

0DataRank · unranked

3 citations

Katherine D. Bauman, Y. Erin Chen, Victor K. Yu, Pranav V. Lalgudi, Arash Naziripour +17 more

A PTER-dependent pathway of taurine metabolism linked to energy balance

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.21.586194

N/A

0DataRank · unranked

2 citations

Xuchao Lyu, Andrew L. Markhard, Sipei Fu, Rachel E. Mardjuki, P. Cavanagh +20 more

A gut pathobiont regulates circulating glycine and host metabolism in a twin study comparing vegan and omnivorous diets

medRxiv(2025)10.1101/2025.01.08.25320192

N/A

0DataRank · unranked

2 citations

Xianfeng Zeng, Catherine Ward, Matthew J. Landry, Dalia Perelman, Tayler Hennings +12 more

Gut microbial composition modulates food-specific CD4 + T cells in food allergy

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.27.684919

N/A

0DataRank · unranked

0 citations

Flannery Dahlberg, Caroline N. Broude, Xiandong Meng, Sunit Jain, Allison M. Weakley +5 more

Supervised topic modeling for predicting molecular substructure from mass spectrometry

F1000Research(2021)10.12688/f1000research.52549.1

N/A

0DataRank · unranked

5 citations

Adamo Young, Jaan Altosaar, Jakub Rajniak, Noémie Elhadad, Michael A. Fischbach +2 more

Bile acids profile, histopathological indices and genetic variants for non-alcoholic fatty liver disease progression

Metabolism(2020)10.1016/j.metabol.2020.154457

N/A

0DataRank · unranked

143 citations

Ibrahim Choucair, Zeneng Wang, Ina Nemet, Lin Li, Janet Gukasyan +11 more