Nathalie Y.R. Agar

Also affiliated with Harvard University, Brain Mapping Foundation, Dana-Farber Cancer Institute, Dana-Farber/Harvard Cancer Center

MedicineBiochemistry, Genetics and Molecular BiologyChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 36 papers. Top paper: “A unique subset of glycolytic tumour-propagating cells drives squamous cell carcinoma”.

A unique subset of glycolytic tumour-propagating cells drives squamous cell carcinoma

Nature Metabolism(2021)10.1038/s42255-021-00350-6

N/A

1.7DataRank · unranked

48 citations

Carlos Sebastián, Christina M. Ferrer, Caroline A. Lewis, Moshe Sade-Feldman, Thomas J. LaSalle +19 more

BAF Complex Maintains Glioma Stem Cells in Pediatric H3K27M Glioma

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1491

N/A

1.6DataRank · unranked

63 citations

Joana G. Marques, Tingjian Wang, Maria Trissal, Ilon Liu, Li Jiang +50 more

PARP-inhibition reprograms macrophages toward an anti-tumor phenotype

Cell Reports(2022)10.1016/j.celrep.2022.111462

N/A

1.1DataRank · unranked

57 citations

Dan Wang, Olmo Sonzogni, Shizhong Ke, Qi Wang, Abhishek Thavamani +17 more

Clinical Efficacy of ONC201 in H3K27M-Mutant Diffuse Midline Gliomas Is Driven by Disruption of Integrated Metabolic and Epigenetic Pathways

Cancer Discovery(2023)10.1158/2159-8290.cd-23-0131

N/A

0.757DataRank · unranked

155 citations

Abed Rahman Kawakibi, Sunjong Ji, Sebastian M. Waszak, Stefan R. Sweha, Mateus Mota +79 more

Single cell spatial analysis reveals the topology of immunomodulatory purinergic signaling in glioblastoma

Nature Communications(2022)10.1038/s41467-022-32430-w

N/A

0.675DataRank · unranked

89 citations

Shu Wang, Sylwia A. Stopka, Jia‐Ren Lin, Clarence Yapp, Cecily C. Ritch +18 more

De Novo Pyrimidine Synthesis is a Targetable Vulnerability in IDH Mutant Glioma

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.30.470443

N/A

0.611DataRank · unranked

11 citations

Milan R. Savani, Michael M. Levitt, Adam C. Wang, Jennifer E. Endress, Cylaina Bird +38 more

A non-dividing cell population with high pyruvate dehydrogenase kinase activity regulates metabolic heterogeneity and tumorigenesis in the intestine

Nature Communications(2022)10.1038/s41467-022-29085-y

N/A

0.557DataRank · unranked

40 citations

Christina M. Ferrer, Maria Paola Serra, Jee-Eun Choi, Nadia Ducano, Alessia Mira +20 more

Multimodal platform for assessing drug distribution and response in clinical trials

Neuro-Oncology(2021)10.1093/neuonc/noab197

N/A

0.524DataRank · unranked

14 citations

Ishwar N. Kohale, Ziming Du, Ilya Korsunsky, Walid M. Abdelmoula, Yang Dai +23 more

DNA-PK Inhibition Shows Differential Radiosensitization in Orthotopic GBM PDX Models Based on DDR Pathway Deficits

Molecular Cancer Therapeutics(2024)10.1158/1535-7163.mct-24-0003

N/A

0.467DataRank · unranked

12 citations

Emily J. Smith, Michael S. Regan, Sylwia A. Stopka, Gerard Baquer, Zhiyi Xue +19 more

Investigative needle core biopsies support multimodal deep-data generation in glioblastoma

Nature Communications(2025)10.1038/s41467-025-58452-8

N/A

0.442DataRank · unranked

18 citations

Sreyashi Basu, Gerard Baquer, Ryuhjin Ahn, Jennifer Gantchev, Sonali Jindal +71 more

Deep Learning on Multimodal Chemical and Whole Slide Imaging Data for Predicting Prostate Cancer Directly from Tissue Images

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.2c00254

N/A

0.416DataRank · unranked

15 citations

Debangshu Mukherjee, Sylwia A. Stopka, Nathalie Y.R. Agar, Jacob Hinkle, Olga S. Ovchinnikova +1 more

Intratumoral drug distribution of adavosertib in patients with glioblastoma: Interim results of phase I study.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.2568

N/A

0.292DataRank · unranked

6 citations

Brian M. Alexander, Nathalie Y.R. Agar, Manmeet S. Ahluwalia, Arati Desai, Jörg Dietrich +14 more

Single Cell Spatial Analysis Reveals the Topology of Immunomodulatory Purinergic Signaling in Glioblastoma

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.12.475925

N/A

0.292DataRank · unranked

6 citations

Shu Wang, Sylwia A. Stopka, Jia‐Ren Lin, Rumana Rashid, Clarence Yapp +12 more

Dysregulation of ceramide metabolism causes phytoceramide-dependent induction of the unfolded protein response

Molecular Biology of the Cell(2024)10.1091/mbc.e24-03-0121

N/A

0.269DataRank · unranked

5 citations

Md Amin Hossain, Sylwia A. Stopka, Yagmur Micoogullari, Jessie Ang, Nathalie Y.R. Agar +2 more

WSD-0922, a novel brain-penetrant inhibitor of epidermal growth factor receptor, promotes survival in glioblastoma mouse models

Neuro-Oncology Advances(2023)10.1093/noajnl/vdad066

N/A

0.269DataRank · unranked

5 citations

Sylwia A. Stopka, Ju‐Hee Oh, Ann C. Mladek, Danielle M. Burgenske, Michael S. Regan +15 more

Treatment of Recurrent Glioblastoma by Chronic Convection-Enhanced Delivery of Topotecan

medRxiv(2021)10.1101/2021.12.04.21266935

N/A

0.227DataRank · unranked

3 citations

Michael Argenziano, Pavan S. Upadhyayula, Matei A. Banu, Justin A. Neira, Dominique Higgins +29 more

Spatial Distribution of Transcytosis Relevant Phospholipids in Response to Omega-3 Dietary Deprivation

ACS Chemical Biology(2020)10.1021/acschembio.0c00779

N/A

0.208DataRank · unranked

3 citations

Elizabeth C. Randall, Begoña Giménez, Michael S. Regan, Jeffrey N. Agar, Benjamin J. Andreone +3 more

Spatially resolved metabolomics and isotope tracing reveal dynamic metabolic responses of dentate granule neurons with acute stimulation

耳鼻と臨床(2023)10.21203/rs.3.rs-2276903/v1

N/A

0.104DataRank · unranked

1 citations

Elisa M. York, Sylwia A. Stopka, Juan Ramón Martínez‐François, Md Amin Hossain, Gerard Baquer +4 more

Preclinical Modeling of Navtemadlin Pharmacokinetics, Pharmacodynamics, and Efficacy in IDH–Wild-type Glioblastoma

Clinical Cancer Research(2025)10.1158/1078-0432.ccr-25-0244

N/A

0DataRank · unranked

2 citations

Wenjuan Zhang, Ju-Hee Oh, Ann C. Mladek, Tugce I. Pasa, Jennifer Gantchev +24 more

Peak learning of mass spectrometry imaging data using artificial neural networks

Nature Communications(2021)10.1038/s41467-021-25744-8

N/A

0DataRank · unranked

100 citations

Begona G. C. Lopez, Elizabeth C. Randall, Tina Kapur, Jann N. Sarkaria, Forest M. White +4 more

Interim clinical trial analysis of intraoperative mass spectrometry for breast cancer surgery

npj Breast Cancer(2021)10.1038/s41523-021-00318-5

N/A

0DataRank · unranked

24 citations

Sylwia A. Stopka, Walid M. Abdelmoula, Elizabeth C. Randall, Begoña Giménez, Michael S. Regan +9 more

A druggable addiction to de novo pyrimidine biosynthesis in diffuse midline glioma

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.30.470644

N/A

0DataRank · unranked

0 citations

Jakub Kaplan, Huy Nguyen, Sylwia A. Stopka, Milan R. Savani, Michael S. Regan +16 more

Characterization of metabolic compartmentalization in the liver using spatially resolved metabolomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.13.472421

N/A

0DataRank · unranked

0 citations

Sylwia A. Stopka, Walid M. Abdelmoula, Daniela Ruiz, Shakchhi Joshi, Alison E. Ringel +3 more

De novo pyrimidine synthesis is a targetable vulnerability in IDH mutant glioma

Cancer Cell(2022)10.1016/j.ccell.2022.07.011

N/A

0DataRank · unranked

131 citations

Milan R. Savani, Michael M. Levitt, Adam C. Wang, Jennifer E. Endress, Cylaina Bird +46 more

massNet: integrated processing and classification of spatially resolved mass spectrometry data using deep learning for rapid tumor delineation

Bioinformatics(2022)10.1093/bioinformatics/btac032

N/A

0DataRank · unranked

30 citations

Sylwia A. Stopka, Elizabeth C. Randall, Michael S. Regan, Jeffrey N. Agar, Jann N. Sarkaria +4 more

Multiplatform Metabolomics Studies of Human Cancers With NMR and Mass Spectrometry Imaging

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.785232

N/A

0DataRank · unranked

16 citations

Isabella H. Muti, Stephen J. Eyles, Richard W. Vachet, Kristen N. Sikora, Cedric E. Bobst +10 more

Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers

PLoS ONE(2022)10.1371/journal.pone.0261803

N/A

0DataRank · unranked

16 citations

Jiska van der Reest, Walid M. Abdelmoula, Daniela Ruiz, Shakchhi Joshi, Alison E. Ringel +3 more

Convection enhanced delivery of EGFR targeting antibody-drug conjugates Serclutamab talirine and Depatux-M in glioblastoma patient-derived xenografts

Neuro-Oncology Advances(2022)10.1093/noajnl/vdac130

N/A

0DataRank · unranked

13 citations

Michael S. Regan, Jessica I. Griffith, Sonia Jain, Sylwia A. Stopka, Danielle M. Burgenske +19 more

Deep Learning on Multimodal Chemical and Whole Slide Imaging Data for Predicting Prostate Cancer Directly from Tissue Images

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.11.491570

N/A

0DataRank · unranked

0 citations

Debangshu Mukherjee, Sylwia A. Stopka, Nathalie Y.R. Agar, Jacob Hinkle, Olga S. Ovchinnikova +1 more

Spatially resolved metabolomics and isotope tracing reveal dynamic metabolic responses of dentate granule neurons with acute stimulation

Nature Metabolism(2023)10.1038/s42255-023-00890-z

N/A

0DataRank · unranked

46 citations

Elisa M. York, Sylwia A. Stopka, Juan Ramón Martínez‐François, Md Amin Hossain, Gerard Baquer +4 more

Chemical QuantArray: A Quantitative Tool for Mass Spectrometry Imaging

Analytical Chemistry(2023)10.1021/acs.analchem.3c00803

N/A

0DataRank · unranked

19 citations

Daniela Ruiz, Gerard Baquer, Clément Bodineau, Md Amin Hossain, Valentina T. Pellens +9 more

The dentate gyrus differentially metabolizes glucose and alternative fuels during rest and stimulation

Journal of Neurochemistry(2023)10.1111/jnc.16004

N/A

0DataRank · unranked

18 citations

Anne Miller, Sylwia A. Stopka, Juan Ramón Martínez‐François, Md Amin Hossain, Gerard Baquer +4 more

Investigative needle core biopsies for multi-omics in Glioblastoma

medRxiv(2023)10.1101/2023.12.29.23300541

N/A

0DataRank · unranked

6 citations

Sreyashi Basu, Gerard Baquer, Ryuhjin Ahn, Jennifer Gantchev, Sonali Jindal +44 more

A Benzarone Derivative Inhibits EYA to Suppress Tumor Growth in SHH Medulloblastoma

Cancer Research(2024)10.1158/0008-5472.can-22-3784

N/A

0DataRank · unranked

11 citations

Maria F. Pazyra‐Murphy, Hyuk‐Soo Seo, Sirano Dhe‐Paganon, Sylwia A. Stopka, Marina DiPiazza +12 more

Pre-clinical modeling of navtemadlin pharmacokinetics (PK), pharmacodynamics (PD), and efficacy in glioblastoma, IDH-wildtype.

Journal of Clinical Oncology(2024)10.1200/jco.2024.42.16_suppl.2012

N/A

0DataRank · unranked

0 citations

Wenjuan Zhang, Ann C. Mladek, Tugce I. Pasa, Katie L. Waller, Sylwia A. Stopka +15 more

GUK1 activation is a metabolic liability in lung cancer

Cell(2025)10.1016/j.cell.2025.01.024

N/A

0DataRank · unranked

16 citations

Kiran Kurmi, Yutong Dai, Ishita Dhiman, Shakchhi Joshi, Brandon M. Gassaway +21 more