Lori A. Coburn

Also affiliated with VA Tennessee Valley Healthcare System, Vanderbilt University Medical Center

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Roadmap for the Human Gut Cell Atlas

Nature Reviews Gastroenterology & Hepatology(2023)10.1038/s41575-023-00784-1

Top 17%

1.2DataRank

Top 17%51 citations

Kylie R. James, Mandeep Kaur, Sebastian Pott, Zhixin Li, Albert Burger +37 more

Papers

Driven by 31 papers — median percentile 83. Top paper: “Protective Role of Spermidine in Colitis and Colon Carcinogenesis”.

Protective Role of Spermidine in Colitis and Colon Carcinogenesis

Gastroenterology(2021)10.1053/j.gastro.2021.11.005

N/A

3.5DataRank · unranked

161 citations

Yvonne L. Latour, Mohammad Asim, Daniel P. Barry, Margaret M. Allaman, Jordan L. Finley +13 more

A Roadmap for the Human Gut Cell Atlas

Nature Reviews Gastroenterology & Hepatology(2023)10.1038/s41575-023-00784-1

Top 17%

1.2DataRank

Top 17%51 citations

Kylie R. James, Mandeep Kaur, Sebastian Pott, Zhixin Li, Albert Burger +37 more

Identification and multimodal characterization of a specialized epithelial cell type associated with Crohn’s disease

Nature Communications(2024)10.1038/s41467-024-51580-7

N/A

1.1DataRank · unranked

49 citations

Alan J. Simmons, Caroline V. Hawkins, Sophie Chiron, Marisol Ramirez‐Solano, Naila Tasneem +34 more

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging

Electronic Imaging(2025)10.2352/ei.2025.37.14.coimg-132

N/A

0.581DataRank · unranked

47 citations

Can Cui, Quan Liu, Tianyuan Yao, Lucas W. Remedios, Shunxing Bao +11 more

Predicting Crohn’s disease severity in the colon using mixed cell nucleus density from pseudo labels

PubMed(2023)10.1117/12.2653918

N/A

0.241DataRank · unranked

4 citations

Shunxing Bao, Cailey I. Kerley, Leon Y. Cai, François Rheault, Ruining Deng +10 more

The reverse transsulfuration pathway affects the colonic microbiota and contributes to colitis in mice

Amino Acids(2024)10.1007/s00726-024-03423-4

N/A

0.165DataRank · unranked

2 citations

Yvonne L. Latour, Kara M. McNamara, Caroline V. Hawkins, Kamery J. Williams, Mohammad Asim +10 more

Eosinophils exert direct and indirect anti-tumorigenic effects in the development of esophageal squamous cell carcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.01.543287

N/A

0.165DataRank · unranked

2 citations

Zaryab Aziz, Lili Sun, Jasmine Chaparro, Jennifer M. Pilat, Aaron Kwag +17 more

A Specialized Epithelial Cell Type Regulating Mucosal Immunity and Driving Human Crohn’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.30.560293

N/A

0DataRank · unranked

10 citations

Alan J. Simmons, Sophie Chiron, Marisol Ramirez‐Solano, Naila Tasneem, Harsimran Kaur +24 more

The dicarbonyl electrophile scavenger 2-hydroxybenzylamine (2-HOBA) prevents colorectal carcinogenesis and reduces tumor growth

(2023)10.22541/au.167515663.34499902/v1

N/A

0DataRank · unranked

1 citations

Mohammad Asim, Thaddeus M. Smith, Kamery J. Williams, Daniel P. Barry, Margaret M. Allaman +10 more

Topological-preserving membrane skeleton segmentation in multiplex immunofluorescence imaging

PubMed(2023)10.1117/12.2654087

N/A

0DataRank · unranked

0 citations

Can Cui, Jia Li, Yucheng Tang, Ho Hin Lee, Ruining Deng +13 more

Exploring shared memory architectures for end-to-end gigapixel deep learning

arXiv (Cornell University)(2023)10.48550/arxiv.2304.12149

N/A

0DataRank · unranked

0 citations

Leon Y. Cai, Samuel W. Remedios, Karthik Ramadass, Aravind Krishnan, Ruining Deng +6 more

Cell Spatial Analysis in Crohn's Disease: Unveiling Local Cell Arrangement Pattern with Graph-based Signatures

arXiv (Cornell University)(2023)10.48550/arxiv.2308.10166

N/A

0DataRank · unranked

0 citations

Si-Chen Zhu, Vasantha L. Kolachala, Lucas W. Remedios, Yeonjoo Hwang, Yutong Sun +14 more

Cross-scale multi-instance learning for pathological image diagnosis

Medical Image Analysis(2024)10.1016/j.media.2024.103124

N/A

0DataRank · unranked

84 citations

Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron +10 more

Spermine oxidase promotes Helicobacter pylori-mediated gastric carcinogenesis through acrolein production

Oncogene(2024)10.1038/s41388-024-03218-7

N/A

0DataRank · unranked

13 citations

Johanna C. Sierra, Yvonne L. Latour, Caroline V. Hawkins, Mohammad Asim, Kamery J. Williams +14 more

Analysis of the effect of hypusination in myeloid cells on colitis and colitis-associated cancer

Heliyon(2024)10.1016/j.heliyon.2024.e33838

N/A

0DataRank · unranked

4 citations

Jordan L. Finley, Mohammad Asim, Daniel P. Barry, Margaret M. Allaman, Caroline V. Hawkins +9 more

Nucleus subtype classification using inter-modality learning

PubMed(2024)10.1117/12.3006237

N/A

0DataRank · unranked

2 citations

Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Li +12 more

Cell spatial analysis in Crohn's disease: unveiling local cell arrangement pattern with graph-based signatures

PubMed(2024)10.1117/12.3006675

N/A

0DataRank · unranked

2 citations

Si-Chen Zhu, Vasantha L. Kolachala, Lucas W. Remedios, Yeonjoo Hwang, Yutong Sun +15 more

Data-driven Nucleus Subclassification on Colon H&E using Style-transferred Digital Pathology

arXiv (Cornell University)(2024)10.48550/arxiv.2407.06116

N/A

0DataRank · unranked

1 citations

Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Li +14 more

Nucleus subtype classification using inter-modality learning

arXiv (Cornell University)(2024)10.48550/arxiv.2401.05602

N/A

0DataRank · unranked

0 citations

Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Li +12 more

Mitigating Over-Saturated Fluorescence Images Through a Semi-Supervised Generative Adversarial Network

PubMed(2024)10.1109/isbi56570.2024.10635687

N/A

0DataRank · unranked

0 citations

Junlin Guo, Ho Hin Lee, Ruining Deng, Can Cui, Lucas W. Remedios +14 more

Protective role of epithelial deoxyhypusine synthase in colorectal carcinogenesis caused by deletion of the adenomatous polyposis coli gene

Cancer Letters(2025)10.1016/j.canlet.2025.218002

N/A

0DataRank · unranked

3 citations

Caroline V. Hawkins, Lydia A. Snyder, Kamery J. Williams, Daniel P. Barry, Margaret M. Allaman +15 more

Aconitate Decarboxylase 1 Downregulates Colitis and Maintains Homeostasis of the Gut Metabolome and Microbiome

Gastro Hep Advances(2025)10.1016/j.gastha.2025.100748

N/A

0DataRank · unranked

1 citations

Yvonne L. Latour, Caroline V. Hawkins, Kamery J. Williams, Daniel P. Barry, Margaret M. Allaman +10 more

Pathobiont-triggered induction of epithelial IDO1 drives regional susceptibility to Inflammatory Bowel Disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.04.630951

N/A

0DataRank · unranked

0 citations

Jiawei Wang, Erin P. Smith, Luisella Spiga, Alan J. Simmons, Tae Woo Kim +27 more

Identifying cellular neighborhood phenotypes differentiating normal and quiescent Crohn’s disease via MxIF

PubMed(2025)10.1117/12.3047121

N/A

0DataRank · unranked

0 citations

Shunxing Bao, Aravind R. Krishnan, Lucas W. Remedios, Michael E. Kim, Adam M. Saunders +9 more

Quantitative benchmarking of anomaly detection methods in digital pathology images

Machine Learning Health(2025)10.1088/3049-477x/ae0f9f

N/A

0DataRank · unranked

0 citations

Xindong Zheng, Ruining Deng, Quan Liu, Tianyuan Yao, Keith T. Wilson +6 more

An interspecies translation model implicates integrin signaling in infliximab-resistant inflammatory bowel disease

Science Signaling(2020)10.1126/scisignal.aay3258

N/A

0DataRank · unranked

47 citations

Manu P. Kumar, Evan L. Chiswick, Cecil Gregg, Alina Starchenko, Paige N. Vega +8 more

Dicarbonyl Electrophiles Mediate Inflammation-Induced Gastrointestinal Carcinogenesis

Gastroenterology(2020)10.1053/j.gastro.2020.11.006

N/A

0DataRank · unranked

34 citations

Olivier Boutaud, Mohammad Asim, Irène Zagol-Ikapitte, Alberto G. Delgado, Yvonne L. Latour +16 more

Hypusination Maintains Intestinal Homeostasis and Prevents Colitis and Carcinogenesis by Enhancing Aldehyde Detoxification

Gastroenterology(2023)10.1053/j.gastro.2023.05.041

N/A

0DataRank · unranked

29 citations

Thaddeus M. Smith, Yvonne L. Latour, Mohammad Asim, Daniel P. Barry, Margaret M. Allaman +16 more

Eosinophils Exert Antitumorigenic Effects in the Development of Esophageal Squamous Cell Carcinoma

Cellular and Molecular Gastroenterology and Hepatology(2023)10.1016/j.jcmgh.2023.08.005

N/A

0DataRank · unranked

14 citations

Zaryab Aziz, Lili Sun, Jasmine Chaparro, Jennifer M. Pilat, Aaron Kwag +17 more

Electrophilic reactive aldehydes as a therapeutic target in colorectal cancer prevention and treatment

Oncogene(2023)10.1038/s41388-023-02691-w

N/A

0DataRank · unranked

9 citations

Mohammad Asim, Thaddeus M. Smith, Kamery J. Williams, Daniel P. Barry, Margaret M. Allaman +10 more

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging

arXiv (Cornell University)(2023)10.48550/arxiv.2304.04155

N/A

0DataRank · unranked

97 citations

Can Cui, Quan Liu, Tianyuan Yao, Lucas W. Remedios, Shunxing Bao +11 more

Lori A. Coburn

Indexed papers

Top data-sharing exemplar

Papers