🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Apratim Mitra

Haldia Institute of Technology

ORCID: 0000-0003-3279-0054

Also affiliated with Eunice Kennedy Shriver National Institute of Child Health and Human Development

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An epigenome atlas of neural progenitors within the embryonic mouse forebrain

Nature Communications(2022)10.1038/s41467-022-31793-4
Top 20%
1.0DataRank
Top 20%39 citations

Joyce J. Thompson, Apratim Mitra, Dhanya Asokumar, Dongjin R. Lee, Daniel J. Lee +6 more

Papers

Driven by 20 papers — median percentile 80. Top paper: “KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage”.

KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage

eLife(2020)10.7554/elife.56337
N/A
2.7DataRank · unranked
136 citations

Alberto De Iaco, Ming‐an Sun, Melania Bruno, Matthew Tinkham, Don Hoang +5 more

An epigenome atlas of neural progenitors within the embryonic mouse forebrain

Nature Communications(2022)10.1038/s41467-022-31793-4
Top 20%
1.0DataRank
Top 20%39 citations

Joyce J. Thompson, Apratim Mitra, Dhanya Asokumar, Dongjin R. Lee, Daniel J. Lee +6 more

Cardiac pathologies in mouse loss of imprinting models are due to misexpression of H19 long noncoding RNA

eLife(2021)10.7554/elife.67250
N/A
0.585DataRank · unranked
14 citations

Beenish Rahat, Hyung Chul Lee, Zu‐Xi Yu, Jacob Noeker, Apratim Mitra +7 more

Regulation of human development by ubiquitin chain editing of chromatin remodelers

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.23.917450
N/A
0.208DataRank · unranked
3 citations

Mohammed A. Basar, Anthony J. Asmar, Joyce J. Thompson, Hirotsugu Oda, Daniela Tiaki Uehara +24 more

Non-essential function of KRAB zinc finger gene clusters in retrotransposon suppression

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.17.910679
N/A
0.165DataRank · unranked
2 citations

Alberto De Iaco, Ming‐an Sun, Melania Bruno, Matthew Tinkham, Don Hoang +5 more

Rapid redistribution and extensive binding of NANOG and GATA6 at shared regulatory elements underlie specification of divergent cell fates

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.28.454132
N/A
0DataRank · unranked
5 citations

Daniel J. Lee, Apratim Mitra, Sarah Frail, Ryan Dale, Pedro P. Rocha +1 more

Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages

Nature Communications(2022)10.1038/s41467-022-31938-5
N/A
0DataRank · unranked
55 citations

Daniel J. Lee, Apratim Mitra, Sarah Frail, Ryan Dale, Pedro P. Rocha +1 more

Somatic SMAD3-activating mutations cause melorheostosis by up-regulating the TGF-β/SMAD pathway

The Journal of Experimental Medicine(2020)10.1084/jem.20191499
N/A
0DataRank · unranked
49 citations

Smita Jha, Aleksandra Ivovic, Nadja Fratzl‐Zelman, Zuoming Deng, Apratim Mitra +12 more

Decreasing Wapl dosage partially corrects embryonic growth and brain transcriptome phenotypes in Nipbl +/− embryos

Science Advances(2022)10.1126/sciadv.add4136
N/A
0DataRank · unranked
15 citations

Christopher J. Tracy, Apratim Mitra, Beenish Rahat, Matthew T. Van Winkle, Claudia Gebert +6 more

Decreasing Wapl dosage partially corrects transcriptome phenotypes in Nipbl -/+ embryonic mouse brain

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.31.493745
N/A
0DataRank · unranked
1 citations

Christopher J. Tracy, Apratim Mitra, Matthew T. Van Winkle, Claudia Gebert, Jacob Noeker +5 more

Enhancer–promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness

Nature Genetics(2023)10.1038/s41588-022-01295-6
N/A
0DataRank · unranked
114 citations

Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari +8 more

Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis

Nature Communications(2023)10.1038/s41467-023-41349-9
N/A
0DataRank · unranked
39 citations

Resmi Raju, Daniela M Roth, Emma Wentworth Winchester, Parna Chattaraj, Fahad Kidwai +10 more

Absence of TRIC-B from type XIV Osteogenesis Imperfecta osteoblasts alters cell adhesion and mitochondrial function – A multi-omics study

Matrix Biology(2023)10.1016/j.matbio.2023.06.004
N/A
0DataRank · unranked
16 citations

Apratim Mitra, Roberta Besio, Barbara Maria Contento, Ka Wai Wong, Alberta Derkyi +5 more

Integrated spatiotemporal transcriptomic resolution of embryonic palate osteogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.30.534875
N/A
0DataRank · unranked
1 citations

Resmi Raju, Daniela M Roth, Parna Chattaraj, Fahad Kidwai, Fábio R. Faucz +8 more

Young KRAB-zinc finger gene clusters are highly dynamic incubators of ERV-driven genetic heterogeneity in mice

Nature Communications(2025)10.1038/s41467-025-64609-2
N/A
0DataRank · unranked
3 citations

Sharaf M. Farhana, Apratim Mitra, Kevin R Costello, Dawn E. Watkins‐Chow, Glennis A. Logsdon +8 more

CRTAP-Null Osteoblasts Have Increased Proliferation, Protein Secretion, and Skeletal Morphogenesis Gene Expression with Downregulation of Cellular Adhesion

Cells(2025)10.3390/cells14070518
N/A
0DataRank · unranked
0 citations

Apratim Mitra, Marianne Knue, Alberta Derkyi, An Dang, Ryan Dale +2 more

Ldb1 is required for Lmo2 oncogene–induced thymocyte self-renewal and T-cell acute lymphoblastic leukemia

Blood(2020)10.1182/blood.2019000794
N/A
0DataRank · unranked
15 citations

Apratim Mitra, Kairong Cui, Bin Zhao, Seeyoung Choi, Jan Y. Lee +10 more

Transglutaminase 2-expressing macrophages modulate adipose tissue inflammation

Communications Biology(2025)10.1038/s42003-025-08199-1
N/A
0DataRank · unranked
0 citations

Tushar Patel, Benjamin T. Cole, Eliza A Jansujwicz, Jocelyn Chen, MELANIE HOLLIS +3 more

Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation

Science Advances(2021)10.1126/sciadv.abe2116
N/A
0DataRank · unranked
50 citations

Mohammed A. Basar, Anthony J. Asmar, Joyce J. Thompson, Hirotsugu Oda, Daniela Tiaki Uehara +28 more

The histone demethylase Lsd1 regulates multiple repressive gene programs during T cell development

The Journal of Experimental Medicine(2021)10.1084/jem.20202012
N/A
0DataRank · unranked
13 citations

Lauren Clubb, Apratim Mitra, Laura B. Chopp, Jia Nie, Yi Ding +9 more