🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Alexey Markin

Agricultural Research Service

ORCID: 0000-0003-3280-9050

Also affiliated with United States Department of Agriculture, National Agricultural Library, National Animal Disease Center

Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 12 papers. Top paper: “PARNAS: Objectively Selecting the Most Representative Taxa on a Phylogeny”.

PARNAS: Objectively Selecting the Most Representative Taxa on a Phylogeny

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.12.507613
N/A
0.104DataRank · unranked
1 citations

Sanket Wagle, Siddhant Grover, Amy L. Vincent, Oliver Eulenstein, Tavis K. Anderson +1 more

Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.15.520479
N/A
0DataRank · unranked
5 citations

Giovana Ciacci Zanella, Zebulun Arendsee, Jianqiang Zhang, Karen Krueger, Phillip C. Gauger +3 more

Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential

PLoS Pathogens(2023)10.1371/journal.ppat.1011476
N/A
0DataRank · unranked
61 citations

Giovana Ciacci Zanella, Zebulun Arendsee, Jianqiang Zhang, Karen Krueger, Phillip C. Gauger +3 more

PARNAS: Objectively Selecting the Most Representative Taxa on a Phylogeny

Systematic Biology(2023)10.1093/sysbio/syad028
N/A
0DataRank · unranked
50 citations

Sanket Wagle, Siddhant Grover, Amy L. Vincent, Oliver Eulenstein, Tavis K. Anderson +1 more

Phylogenetic diversity statistics for all clades in a phylogeny

Bioinformatics(2023)10.1093/bioinformatics/btad263
N/A
0DataRank · unranked
3 citations

Alexey Markin, Tavis K. Anderson, Oliver Eulenstein, Siddhant Grover

Emergence and interstate spread of highly pathogenic avian influenza A(H5N1) in dairy cattle

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.01.591751
N/A
0DataRank · unranked
113 citations

Carl R. Hutter, Alexey Markin, Megan Thomas, Kristina Lantz, Mary Lea Killian +22 more

Active surveillance for influenza A virus in swine reveals within-farm reassortment and cocirculation of distinct subtypes and genetic clades

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.28.601245
N/A
0DataRank · unranked
2 citations

Garrett M. Janzen, Alexey Markin, Aditi Sharma, Kelly Hewitt, Ganwu Li +4 more

Phylo-rs: an extensible phylogenetic analysis library in rust

BMC Bioinformatics(2025)10.1186/s12859-025-06234-w
N/A
0DataRank · unranked
5 citations

Tavis K. Anderson, Alexey Markin, Oliver Eulenstein, Sriram Vijendran

Active surveillance for influenza A virus in swine reveals within-farm reassortment and cocirculation of distinct subtypes and genetic clades

Veterinary Microbiology(2025)10.1016/j.vetmic.2025.110681
N/A
0DataRank · unranked
4 citations

Garrett M. Janzen, Alexey Markin, Aditi Sharma, Kelly Hewitt, Ganwu Li +4 more

Transmission and Pathologic Findings of Divergent Human Seasonal H1N1pdm09 Influenza A Viruses Following Spillover Into Pigs in the United States

Influenza and Other Respiratory Viruses(2025)10.1111/irv.70128
N/A
0DataRank · unranked
3 citations

Alexey Markin, Megan N. Thomas, Celeste A. Snyder, Carine K. Souza, Bailey Arruda +3 more

RF-Net 2: fast inference of virus reassortment and hybridization networks

Bioinformatics(2022)10.1093/bioinformatics/btac075
N/A
0DataRank · unranked
12 citations

Sanket Wagle, Tavis K. Anderson, Oliver Eulenstein, Alexey Markin

Exact median-tree inference for unrooted reconciliation costs

BMC Evolutionary Biology(2020)10.1186/s12862-020-01700-w
N/A
0DataRank · unranked
0 citations

Alexey Markin, Oliver Eulenstein, Paweł Górecki