Jeremy Smedley

Also affiliated with Oregon Health & Science University, Vaccine and Gene Therapy Institute

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 51 papers. Top paper: “CCR5 Receptor Occupancy Analysis Reveals Increased Peripheral Blood CCR5+CD4+ T Cells Following Treatment With the Anti-CCR5 Antibody Leronlimab”.

CCR5 Receptor Occupancy Analysis Reveals Increased Peripheral Blood CCR5+CD4+ T Cells Following Treatment With the Anti-CCR5 Antibody Leronlimab

Frontiers in Immunology(2021)10.3389/fimmu.2021.794638

N/A

1.1DataRank · unranked

26 citations

Helen L. Wu, Gabriela M. Webb, Meenakshi Tiwary, Colette M. Hughes, Jason S. Reed +16 more

Suppression of human and simian immunodeficiency virus replication with the CCR5-specific antibody Leronlimab in two species

PLoS Pathogens(2022)10.1371/journal.ppat.1010396

N/A

0.655DataRank · unranked

16 citations

Jason S. Reed, Gabriela M. Webb, Helen L. Wu, Jimmy T. Lê, Katherine B. Bateman +29 more

The human IL-15 superagonist N-803 promotes migration of virus-specific CD8+ T and NK cells to B cell follicles but does not reverse latency in ART-suppressed, SHIV-infected macaques

PLoS Pathogens(2020)10.1371/journal.ppat.1008339

N/A

0.626DataRank · unranked

64 citations

Jhomary Molden, Kathleen Busman‐Sahay, Shaheed Abdulhaqq, Helen L. Wu, Whitney C. Weber +17 more

CD8+ T cells fail to limit SIV reactivation following ART withdrawal until after viral amplification

Journal of Clinical Investigation(2021)10.1172/jci141677

N/A

0.553DataRank · unranked

39 citations

Derick D. Duell, Yoshinori Fukazawa, Benjamin Varco-Merth, Alejandra Marenco, Hannah Michaela Behrens +19 more

In vitro and in vivo characterization of a recombinant rhesus cytomegalovirus containing a complete genome

PLoS Pathogens(2020)10.1371/journal.ppat.1008666

N/A

0.546DataRank · unranked

37 citations

Eisa Mahyari, Craig N. Kreklywich, Luke S. Uebelhoer, Matthew R. McArdle, Matilda J. Moström +30 more

Cytomegalovirus-vaccine-induced unconventional T cell priming and control of SIV replication is conserved between primate species

Cell Host & Microbe(2022)10.1016/j.chom.2022.07.013

N/A

0.489DataRank · unranked

25 citations

Roxanne M. Gilbride, Helen L. Wu, Joseph M. Hwang, Nicholas Maier, Colette M. Hughes +28 more

Allogeneic immunity clears latent virus following allogeneic stem cell transplantation in SIV-infected ART-suppressed macaques

Immunity(2023)10.1016/j.immuni.2023.04.019

N/A

0.483DataRank · unranked

24 citations

Kathleen Busman‐Sahay, Whitney C. Weber, Courtney Waytashek, Carla Boyle, Katherine B. Bateman +38 more

Long-term hepatitis B virus infection of rhesus macaques requires suppression of host immunity

Nature Communications(2022)10.1038/s41467-022-30593-0

N/A

0.457DataRank · unranked

20 citations

Lauren N. Rust, Jochen M. Wettengel, Sofiya Yusova, Miranda Fischer, Julien N. Carson +15 more

Viral opportunistic infections in Mauritian cynomolgus macaques undergoing allogeneic stem cell transplantation mirror human transplant infectious disease complications

Xenotransplantation(2020)10.1111/xen.12578

N/A

0.396DataRank · unranked

13 citations

Whitney C. Weber, Christine Shriver‐Munsch, Tonya Swanson, Mina Northrup, Heidi Price +24 more

Mucosal T Helper 17 and T Regulatory Cell Homeostasis Correlate with Acute Simian Immunodeficiency Virus Viremia and Responsiveness to Antiretroviral Therapy in Macaques

AIDS Research and Human Retroviruses(2019)10.1089/aid.2018.0184

N/A

0.385DataRank · unranked

12 citations

Paul V. Munson, Hillary C. Tunggal, Nika Hajari, Thomas B. Lewis, Debra Bratt +6 more

Enhanced interpretation of immune cell phenotype and function through a rhesus macaque single-cell atlas

Cell Genomics(2025)10.1016/j.xgen.2025.100849

N/A

0.292DataRank · unranked

6 citations

Gregory Boggy, GW McElfresh, Maanasa Kaza, Sebastian Benjamin, Benjamin Varco-Merth +17 more

Glycoprotein L–deleted single-cycle rhesus cytomegalovirus vectors elicit MHC-E–restricted CD8+ T cells that protect against SIV

The Journal of Immunology(2025)10.1093/jimmun/vkaf104

N/A

0.269DataRank · unranked

5 citations

John B. Schell, Emily E. Marshall, Sohita Ojha, Shana Feltham, David Morrow +19 more

Terumo spectra optia leukapheresis of cynomolgus macaques for hematopoietic stem cell and T cell collection

Journal of Clinical Apheresis(2020)10.1002/jca.21842

N/A

0.241DataRank · unranked

4 citations

Justin Greene, Tonya Swanson, Christine Shriver‐Munsch, Kimberly Armantrout, Whitney C. Weber +13 more

Immune perturbation following SHIV infection is greater in newborn macaques than in infants

JCI Insight(2024)10.1172/jci.insight.144448

N/A

0.213DataRank · unranked

3 citations

Tracy Ordonez, Shilpi Pandey, Eisa Mahyari, Kosiso Onwuzu, Jason S. Reed +10 more

A model of lymphocryptovirus-associated post-transplant lymphoproliferative disorder in immunosuppressed Mauritian cynomolgus macaques

PLoS Pathogens(2024)10.1371/journal.ppat.1012644

N/A

0.165DataRank · unranked

2 citations

Whitney C. Weber, Courtney Waytashek, Carla Boyle, Jason S. Reed, Katherine B. Bateman +24 more

Antimicrobial prophylaxis does not improve post-surgical outcomes in SIV/SHIV-uninfected or SIV/SHIV-infected macaques (Macaca mulatta and Macaca fascicularis) based on a retrospective analysis

PLoS ONE(2022)10.1371/journal.pone.0266616

N/A

0DataRank · unranked

10 citations

Kimberly Cook, Kimberly Armantrout, Hugh Crank, Samantha Uttke, Kelly Maher +5 more

Liver Bacterial Dysbiosis With Non-Tuberculosis Mycobacteria Occurs in SIV-Infected Macaques and Persists During Antiretroviral Therapy

Frontiers in Immunology(2022)10.3389/fimmu.2021.793842

N/A

0DataRank · unranked

6 citations

Katherine A. Fancher, Andrew T. Gustin, Cole Fisher, Matthew P. Wood, Michael Gale +6 more

Effects of Early Antiretroviral Therapy on the Composition and Diversity of the Fecal Microbiome of SIV-infected Rhesus Macaques (Macaca mulatta)

Comparative Medicine(2022)10.30802/aalas-cm-22-000020

N/A

0DataRank · unranked

2 citations

Devin N. Fachko, Jeffrey M. Stanton, Benjamin Varco-Merth, Jeremy Smedley, Afam A. Okoye +2 more

Optimization and use of near infrared imaging to guide lymph node collection in rhesus macaques (Macaca mulatta)

Journal of Medical Primatology(2022)10.1111/jmp.12605

N/A

0DataRank · unranked

3 citations

Rachele M. Bochart, Miranda Fischer, Heidi Funderburgh, Vanessa J. Kelly, Hugh Crank +25 more

Therapeutic neutralizing monoclonal antibody administration protects against lethal Yellow Fever infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.16.491863

N/A

0DataRank · unranked

0 citations

Lauren N. Rust, Núria Pedreño-López, Sofiya Yusova, Sreya Biswas, Gabriela M. Webb +27 more

Mayaro virus pathogenesis and immunity in rhesus macaques

PLoS neglected tropical diseases(2023)10.1371/journal.pntd.0011742

N/A

0DataRank · unranked

16 citations

Caralyn S. Labriola, Craig N. Kreklywich, Karina Ray, Nicole N. Haese, Takeshi F. Andoh +18 more

Therapeutic neutralizing monoclonal antibody administration protects against lethal yellow fever virus infection

Science Translational Medicine(2023)10.1126/scitranslmed.ade5795

N/A

0DataRank · unranked

10 citations

Lauren N. Rust, Núria Pedreño-López, Sofiya Yusova, Sreya Biswas, Gabriela M. Webb +28 more

Identification of Vancomycin Resistance in Methicillin-resistant Staphylococcus aureus in two macaque species and decolonization and long-term prevention of recolonization in Cynomolgus Macaques (Macaca fascicularis)

Frontiers in Immunology(2023)10.3389/fimmu.2023.1244637

N/A

0DataRank · unranked

2 citations

Kimberly Armantrout, Hugh Crank, Rachael Tonelli, Christine Shriver‐Munsch, Tonya Swanson +6 more

Correction: Mitigation of endemic GI-tract pathogen-mediated inflammation through development of multimodal treatment regimen and its impact on SIV acquisition in rhesus macaques

PLoS Pathogens(2023)10.1371/journal.ppat.1011343

N/A

0DataRank · unranked

0 citations

Kathleen Busman‐Sahay, Stephen Bondoc, David Morrow, Alexandra M. Ortiz, Christine M. Fennessey +18 more

Editorial: Preclinical macaque models of viral diseases

Frontiers in Immunology(2023)10.3389/fimmu.2023.1331774

N/A

0DataRank · unranked

0 citations

Jeremy Smedley

Anti–PD-1 chimeric antigen receptor T cells efficiently target SIV-infected CD4+ T cells in germinal centers

Journal of Clinical Investigation(2024)10.1172/jci169309

N/A

0DataRank · unranked

21 citations

Yoshinori Fukazawa, Christopher W. Peterson, Françoise Haeseleer, Manuel Medina, Shelby Hoffmeister +17 more

Early antiretroviral therapy in SIV-infected rhesus macaques reveals a multiphasic, saturable dynamic accumulation of the rebound competent viral reservoir

PLoS Pathogens(2024)10.1371/journal.ppat.1012135

N/A

0DataRank · unranked

20 citations

Afam A. Okoye, Christine M. Fennessey, Benjamin Varco-Merth, Taina T. Immonen, Emek Köse +23 more

Immune restoration by TIGIT blockade is insufficient to control chronic SIV infection

Journal of Virology(2024)10.1128/jvi.00273-24

N/A

0DataRank · unranked

10 citations

Cleiton Pessoa, Allyson J. McCullen, Joseph M. Hwang, Matthew Humkey, Raymond Thormin-Odum +9 more

SIV Infection Is Associated with Transient Acute-Phase Steatosis in Hepatocytes In Vivo

Viruses(2024)10.3390/v16020296

N/A

0DataRank · unranked

3 citations

Sreya Biswas, Sofiya Yusova, Cristina Luevano-Santos, Maria Cristina Pacheco, Kimberly A. Meyer +11 more

Impact of alemtuzumab-mediated lymphocyte depletion on SIV reservoir establishment and persistence

PLoS Pathogens(2024)10.1371/journal.ppat.1012496

N/A

0DataRank · unranked

3 citations

Morgan Chaunzwa, Derick M. Duell, Alejandra Marenco, William Goodwin, Rachel Dannay +24 more

Liver-specific transgenic expression of human NTCP in rhesus macaques confers HBV susceptibility on primary hepatocytes

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2413771122

N/A

0DataRank · unranked

3 citations

Jochen M. Wettengel, Sreya Biswas, Junghyun Ryu, Nadine Piekarski, Sofiya Yusova +13 more

Prophylactic and therapeutic neutralizing monoclonal antibody treatment prevents lethal yellow fever infection

JCI Insight(2025)10.1172/jci.insight.191665

N/A

0DataRank · unranked

1 citations

Michael J. Ricciardi, S Lutz, Sofiya Yusova, Johan J. Louw, Aaron Yrizarry-Medina +27 more

Identification of initial sites of SIV rebound after treatment cessation

Research Square(2025)10.21203/rs.3.rs-6814218/v1

N/A

0DataRank · unranked

2 citations

Brandon F. Keele, Afam A. Okoye, Taina T. Immonen, Benjamin Varco-Merth, Derick M. Duell +23 more

An immune-focused supplemental alignment pipeline captures information missed from dominant single-cell RNA-seq analyses, including allele-specific MHC-I regulation

Frontiers in Immunology(2025)10.3389/fimmu.2025.1596760

N/A

0DataRank · unranked

0 citations

GW McElfresh, Maanasa Kaza, Gregory Boggy, Benjamin Varco-Merth, Sohita Ojha +22 more

Elevated peripheral and nervous system inflammation is associated with decreased short-chain fatty acid levels in Zika virus-infected macaques

Journal of Virology(2025)10.1128/jvi.01003-25

N/A

0DataRank · unranked

0 citations

Jennifer A. Manuzak, Charlene Miller, Andrew T. Gustin, Christopher M. Basting, Ryan K. Cheu +16 more

Liver biopsies obtained throughout SIV infection reveal evolving interferon stimulated protein expression within distinct monocyte/macrophage subsets

PLoS Pathogens(2025)10.1371/journal.ppat.1013175

N/A

0DataRank · unranked

0 citations

Brooke I. Johnson, Sreya Biswas, Miranda Fischer, Katherine A. Fancher, Cristina Luevano-Santos +10 more

Mass spectrometry analysis of gut tissue in acute SIV-infection in rhesus macaques identifies early proteome alterations preceding the interferon inflammatory response

Scientific Reports(2023)10.1038/s41598-022-27112-y

N/A

0DataRank · unranked

6 citations

Tiffany Hensley‐McBain, Laura Noël‐Romas, Kenzie Birse, Max Abou, Garrett Westmacott +5 more

Non-bronchoscopic Bronchoalveolar Lavage as a Refinement for Safely Obtaining High-quality Samples from Macaques

Comparative Medicine(2020)10.30802/aalas-cm-99-990066

N/A

0DataRank · unranked

11 citations

Kurt T. Randall, Tonya M Swanson, Hugh Crank, Kimberly Armantrout, Aaron Barber-Axthelm +7 more

Oral Immunization with HIV-1 Envelope SOSIP trimers elicits systemic immune responses and cross-reactive anti-V1V2 antibodies in non-human primates

PLoS ONE(2020)10.1371/journal.pone.0233577

N/A

0DataRank · unranked

11 citations

Nicholas Dambrauskas, Olesya Trakhimets, Daniela V. Andrade, Jeremy Smedley, Donald L. Sodora +2 more

Correction: Antibiotic-induced microbiome perturbations are associated with significant alterations to colonic mucosal immunity in rhesus macaques

Mucosal Immunology(2020)10.1038/s41385-020-0274-x

N/A

0DataRank · unranked

2 citations

Alexander S. Zevin, Ryan K. Cheu, Brian Richardson, Jacob Modesitt, Tiffany Hensley‐McBain +17 more

In vitro and in vivo characterization of a recombinant rhesus cytomegalovirus containing a complete genome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.02.129486

N/A

0DataRank · unranked

2 citations

Eisa Mahyari, Craig N. Kreklywich, Luke S. Uebelhoer, Matthew R. McArdle, Matilda J. Moström +27 more

Liver bacterial dysbiosis occurs in SIV-infected macaques and persists during antiretroviral therapy

Research Square(2020)10.21203/rs.3.rs-108396/v1

N/A

0DataRank · unranked

0 citations

Katherine A. Fancher, Andrew T. Gustin, Cole Fisher, Matthew P. Wood, Nina Derby +6 more

Antibody-based CCR5 blockade protects Macaques from mucosal SHIV transmission

Nature Communications(2021)10.1038/s41467-021-23697-6

N/A

0DataRank · unranked

20 citations

Gabriela M. Webb, Helen L. Wu, Justin Greene, Shaheed Abdulhaqq, Katherine B. Bateman +28 more

Mitigation of endemic GI-tract pathogen-mediated inflammation through development of multimodal treatment regimen and its impact on SIV acquisition in rhesus macaques

PLoS Pathogens(2021)10.1371/journal.ppat.1009565

N/A

0DataRank · unranked

15 citations

Kathleen Busman‐Sahay, Stephen Bondoc, David Morrow, Alexandra M. Ortiz, Christine M. Fennessey +18 more

Protection of Newborn Macaques by Plant-Derived HIV Broadly Neutralizing Antibodies: a Model for Passive Immunotherapy during Breastfeeding

Journal of Virology(2021)10.1128/jvi.00268-21

N/A

0DataRank · unranked

12 citations

Xiaoming Jiang, Tracy Cheever, Felicity J. Coulter, Shilpi Pandey, M. Sack +9 more

Effects of persistent modulation of intestinal microbiota on SIV/HIV vaccination in rhesus macaques

npj Vaccines(2021)10.1038/s41541-021-00298-4

N/A

0DataRank · unranked

12 citations

Courtney A. Broedlow, Jessica M. Osborn, Andrew T. Gustin, Sandra Dross, Megan A. O’Connor +17 more

Immune inactivation of anti-simian immunodeficiency virus chimeric antigen receptor T cells in rhesus macaques

Molecular Therapy — Methods & Clinical Development(2021)10.1016/j.omtm.2021.06.008

N/A

0DataRank · unranked

8 citations

Yoshinori Fukazawa, Haesun Park, Benjamin Varco-Merth, Blake J. Rust, Jeremy Smedley +9 more

A Gut Reaction to SIV and SHIV Infection: Lower Dysregulation of Mucosal T Cells during Acute Infection Is Associated with Greater Viral Suppression during cART

Viruses(2021)10.3390/v13081609

N/A

0DataRank · unranked

3 citations

Paul V. Munson, Sandra Dross, Hillary C. Tunggal, Thomas B. Lewis, Jessica M. Osborn +10 more

Myeloid cell tropism enables MHC-E–restricted CD8 + T cell priming and vaccine efficacy by the RhCMV/SIV vaccine

Science Immunology(2022)10.1126/sciimmunol.abn9301

N/A

0DataRank · unranked

40 citations

Meaghan H. Hancock, Daniel Malouli, Emily E. Marshall, Colette M. Hughes, Kurt T. Randall +24 more

The ingenol-based protein kinase C agonist GSK445A is a potent inducer of HIV and SIV RNA transcription

PLoS Pathogens(2022)10.1371/journal.ppat.1010245

N/A

0DataRank · unranked

22 citations

Rémi Fromentin, Hiroshi Takata, Jessica H. Brehm, Yoshinori Fukazawa, Bryan E. Randall +11 more

Rapamycin limits CD4+ T cell proliferation in simian immunodeficiency virus–infected rhesus macaques on antiretroviral therapy

Journal of Clinical Investigation(2022)10.1172/jci156063

N/A

0DataRank · unranked

19 citations

William Brantley, Alejandra Marenco, Derick D. Duell, Devin N. Fachko, Brian Richardson +17 more