Feiqiao B. Yu

Chan Zuckerberg Initiative (United States)

Also affiliated with Palo Alto Institute, Arc Research Institute

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.701Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron

BMC Biology(2022)10.1186/s12915-022-01481-2

Top 29%

0.701DataRank

Top 29%29 citations

Jiawei Sun, Hualan Liu, Taylor H. Nguyen, Rebecca N. Culver, Arianna I. Celis +11 more

Papers

Driven by 25 papers — median percentile 71. Top paper: “Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes”.

Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes

Cell(2023)10.1016/j.cell.2023.05.046

N/A

4.7DataRank · unranked

224 citations

Matthew R. Olm, Bryan D. Merrill, Dylan Dahan, Surya Tripathi, Sean P. Spencer +7 more

Gut-microbiota-targeted diets modulate human immune status

Cell(2021)10.1016/j.cell.2021.06.019

N/A

4.5DataRank · unranked

1304 citations

Gabriela K. Fragiadakis, Dalia Perelman, Dylan Dahan, Bryan D. Merrill, Feiqiao B. Yu +10 more

Single-cell transcriptional diversity is a hallmark of developmental potential

Science(2020)10.1126/science.aax0249

N/A

1.1DataRank · unranked

1527 citations

Shaheen S. Sikandar, Daniel J. Wesche, Anoop Manjunath, Anjan Bharadwaj, Mark J. Berger +13 more

Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome

Cell Reports(2021)10.1016/j.celrep.2021.109930

N/A

0.761DataRank · unranked

159 citations

Peter Spanogiannopoulos, Paola Soto-Perez, Margaret Alexander, Matthew J. Nalley, Jordan E. Bisanz +5 more

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron

BMC Biology(2022)10.1186/s12915-022-01481-2

Top 29%

0.701DataRank

Top 29%29 citations

Jiawei Sun, Hualan Liu, Taylor H. Nguyen, Rebecca N. Culver, Arianna I. Celis +11 more

ENPP1 is an innate immune checkpoint of the anticancer cGAMP–STING pathway in breast cancer

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2313693120

N/A

0.646DataRank · unranked

73 citations

Volker Böhnert, Alby J. Joseph, Valentino Sudaryo, Gemini Skariah, Jason Swinderman +9 more

Impact of a 7-day homogeneous diet on interpersonal variation in human gut microbiomes and metabolomes

Cell Host & Microbe(2022)10.1016/j.chom.2022.05.003

N/A

0.617DataRank · unranked

60 citations

Sean P. Spencer, Dalia Perelman, Will Van Treuren, Shuo Han, Feiqiao B. Yu +5 more

Assembly of gut-derived bacterial communities follows “early-bird” resource utilization dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.13.523996

N/A

0.470DataRank · unranked

22 citations

Lisa Willis, Taylor H. Nguyen, Po-Yi Ho, Jean C. C. Vila, Tani Thomsen +8 more

The CIAMIB: a Large and Metabolically Diverse Collection of Inflammation-Associated Bacteria from the Murine Gut

mBio(2022)10.1128/mbio.02949-21

N/A

0.470DataRank · unranked

22 citations

Emma Brownlie, Katharine M. Ng, Sornnujah Kathirgamanathan, Feiqiao B. Yu, Bryan D. Merrill +5 more

Quantifying the interplay between rapid bacterial evolution within the mouse intestine and transmission between hosts

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.412072

N/A

0.269DataRank · unranked

5 citations

Lisa Willis, Nate Cira, Katharine M. Ng, Miguel F. Pedro, Andrés Aranda-Díaz +11 more

Reference-free Structural Variant Detection in Microbiomes via Long-read Coassembly Graphs

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.25.577285

N/A

0.241DataRank · unranked

4 citations

Feiqiao B. Yu, Summer E. Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi +3 more

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.27.474270

N/A

0.104DataRank · unranked

1 citations

Jiawei Sun, Hualan Liu, Taylor H. Nguyen, Rebecca N. Culver, Arianna I. Celis +11 more

In vivo augmentation of a complex gut bacterial community

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.15.448620

N/A

0DataRank · unranked

9 citations

Po-Yi Ho, Sunit Jain, Xiandong Meng, Min Wang, Feiqiao B. Yu +14 more

Design, construction, and in vivo augmentation of a complex gut microbiome

Cell(2022)10.1016/j.cell.2022.08.003

N/A

0DataRank · unranked

275 citations

Po-Yi Ho, Andrés Aranda-Díaz, Sunit Jain, Feiqiao B. Yu, Xiandong Meng +19 more

Impact of a 7-day homogeneous diet on interpersonal variation in human gut microbiomes and metabolomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.29.465965

N/A

0DataRank · unranked

10 citations

Sean P. Spencer, Dalia Perelman, Will Van Treuren, Shuo Han, Feiqiao B. Yu +5 more

Systematic dissection of a complex gut bacterial community

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.15.448618

N/A

0DataRank · unranked

11 citations

Andrés Aranda-Díaz, Sunit Jain, Feiqiao B. Yu, Mikhail Iakiviak, Xiandong Meng +8 more

Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics

Microbiome(2021)10.1186/s40168-021-01085-y

N/A

0DataRank · unranked

25 citations

Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Haley Gause, Yue Clare Lou +7 more

Quantifying rapid bacterial evolution and transmission within the mouse intestine

Cell Host & Microbe(2021)10.1016/j.chom.2021.08.003

N/A

0DataRank · unranked

56 citations

Lisa Willis, Nate Cira, Katharine M. Ng, Miguel F. Pedro, Andrés Aranda-Díaz +11 more

Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics and proteomics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.23.004093

N/A

0DataRank · unranked

0 citations

Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Yue Clare Lou, Brian Firek +6 more

Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.09.193847

N/A

0DataRank · unranked

18 citations

Peter Spanogiannopoulos, Paola Soto-Perez, Margaret Alexander, Matthew J. Nalley, Jordan E. Bisanz +5 more

Prolonged delays in human microbiota transmission after a controlled antibiotic perturbation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.26.559480

N/A

0DataRank · unranked

22 citations

Sophie Jean Walton, D.A. Goldman, Maike L. Morrison, Adrian J. Verster, Autumn B. Parrott +9 more

ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.01.543353

N/A

0DataRank · unranked

10 citations

Volker Böhnert, Alby J. Joseph, Valentino Sudaryo, Jason Swinderman, Feiqiao B. Yu +7 more

Reference-free structural variant detection in microbiomes via long-read co-assembly graphs

Bioinformatics(2024)10.1093/bioinformatics/btae224

N/A

0DataRank · unranked

6 citations

Feiqiao B. Yu, Summer E. Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi +3 more

Gut Microbiota-Targeted Diets Modulate Human Immune Status

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.30.321448

N/A

0DataRank · unranked

87 citations

Gabriela K. Fragiadakis, Dalia Perelman, Dylan Dahan, Bryan D. Merrill, Feiqiao B. Yu +8 more

Assembly of stool-derived bacterial communities follows “early-bird” resource utilization dynamics

Cell Systems(2025)10.1016/j.cels.2025.101240

N/A

0DataRank · unranked

14 citations

Lisa Willis, Taylor H. Nguyen, Po-Yi Ho, Jean C. C. Vila, Tani Thomsen +9 more

Feiqiao B. Yu

Indexed papers

Top data-sharing exemplar

Papers