🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Alexandra Tsitsiklis

University of California, San Francisco

ORCID: 0000-0003-3467-1171
MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Physical Activity Moderates Inflammatory Gene Expression in Rheumatoid Arthritis

medRxiv(2021)10.1101/2021.08.27.21262729
Top 100%
0DataRank
Top 100%0 citations

Shenghuan Sun, Dmitry Rychkov, Patricia Katz, Alexandra Tsitsiklis, Mary C. Nakamura +4 more

Papers

Driven by 13 papers — median percentile 0. Top paper: “Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology”.

Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology

Science Translational Medicine(2024)10.1126/scitranslmed.adj5154
N/A
0.708DataRank · unranked
25 citations

Alexandra Tsitsiklis, Cole Maguire, Elias K. Haddad, Patrice M. Becker, Seunghee Kim‐Schulze +95 more

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

Nature Communications(2021)10.1038/s41467-021-25040-5
N/A
0.661DataRank · unranked
81 citations

Stephanie A. Christenson, Ashley Byrne, Eran Mick, Angela Oliveira Pisco, Catherine DeVoe +89 more

Distinct pulmonary and systemic effects of dexamethasone in severe COVID-19

Nature Communications(2024)10.1038/s41467-024-49756-2
N/A
0.647DataRank · unranked
19 citations

Ravi K. Patel, Aartik Sarma, K. Mark Ansel, Stephanie A. Christenson, Michael Adkisson +75 more

Microbial dynamics and pulmonary immune responses in COVID-19 secondary bacterial pneumonia

Nature Communications(2024)10.1038/s41467-024-53566-x
N/A
0.549DataRank · unranked
16 citations

Alexandra Tsitsiklis, Victoria Chu, Hoang Van Phan, Catherine DeVoe, Christina Love +87 more

A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling

iScience(2023)10.1016/j.isci.2023.107813
N/A
0.385DataRank · unranked
12 citations

Haridha Shivram, Jason A. Vander Heiden, Christopher C. Overall, Luz D. Orozco, Xia Gao +95 more

Host-microbe multiomic profiling identifies distinct COVID-19 immune dysregulation in solid organ transplant recipients

Nature Communications(2025)10.1038/s41467-025-55823-z
N/A
0.292DataRank · unranked
6 citations

Joanna Schaenman, Hoang Van Phan, Cole Maguire, Alexandra Tsitsiklis, Nadine Rouphael +93 more

Host-Microbe Multi-omic Profiling Identifies a Unique Program of COVID-19 Inflammatory Dysregulation in Solid Organ Transplant Recipients

Research Square(2023)10.21203/rs.3.rs-3621844/v1
N/A
0.176DataRank · unranked
2 citations

Harry Pickering, Joanna Schaenman, Hoang Phan, Cole Maguire, Alexandra Tsitsiklis +26 more

Peptide Centric Vβ Specific Germline Contacts Shape a Specialist T Cell Response

Frontiers in Immunology(2022)10.3389/fimmu.2022.847092
N/A
0DataRank · unranked
2 citations

Alexandra Tsitsiklis, Stephanie Devoe, Wei Gao, Hunghao Chu, Yan Zhang +9 more

An unusual MHC molecule generates protective CD8+ T cell responses to chronic infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.03.932848
N/A
0DataRank · unranked
2 citations

D.J. Bangs, Lydia K. Lutes, S.F. Chan, Kathrin Geiger, A Modzelewski +6 more

Physical Activity Moderates Inflammatory Gene Expression in Rheumatoid Arthritis

medRxiv(2021)10.1101/2021.08.27.21262729
Top 100%
0DataRank
Top 100%0 citations

Shenghuan Sun, Dmitry Rychkov, Patricia Katz, Alexandra Tsitsiklis, Mary C. Nakamura +4 more

Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics

The Lancet Microbe(2022)10.1016/s2666-5247(21)00304-9
N/A
0DataRank · unranked
62 citations

Christina M. Osborne, Jack Kamm, Kayla Williamson, Katrina Kalantar, Gytis Dudas +28 more

CXCR3 regulates stem and proliferative CD8+ T cells during chronic infection by promoting interactions with DCs in splenic bridging channels

Cell Reports(2022)10.1016/j.celrep.2021.110266
N/A
0DataRank · unranked
41 citations

Alexandra Tsitsiklis, Zoë Steier, Shiao Wei Chan, James J. Kaminski, Aaron Streets +3 more

An Unusual MHC Molecule Generates Protective CD8+ T Cell Responses to Chronic Infection

Frontiers in Immunology(2020)10.3389/fimmu.2020.01464
N/A
0DataRank · unranked
7 citations

Derek J. Bangs, Lydia K. Lutes, Shiao Wei Chan, Kristina Geiger, A Modzelewski +6 more