🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Weida Tong

National Center for Toxicological Research

ORCID: 0000-0003-3488-6148
Computer ScienceBiochemistry, Genetics and Molecular BiologyPharmacology, Toxicology and Pharmaceutics

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
6.9Author DataRank

Indexed papers

7in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6
Top 8%
2.7DataRank
Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

Papers

Driven by 30 papers — median percentile 85. Top paper: “Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology”.

Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology

Nature Biotechnology(2021)10.1038/s41587-021-00857-z
N/A
7.3DataRank · unranked
274 citations

Binsheng Gong, Kevin Lai, Jennifer S. LoCoco, Todd Richmond, Jeoffrey Schageman +82 more

Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies

PLoS ONE(2012)10.1371/journal.pone.0044483
N/A
3.8DataRank · unranked
77 citations

Lei Xu, Jie Liu, Wendell D. Jones, Zhenqiang Su, Baitang Ning +18 more

Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00994-5
N/A
3.8DataRank · unranked
215 citations

Luyao Ren, Zhong Chen, Li Tai Fang, Yongmei Zhao, Justin Lack +85 more

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6
Top 8%
2.7DataRank
Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

A Strategy Capitalizing on Synergies: The Reporting Structure for Biological Investigation (RSBI) Working Group

OMICS: A Journal of Integrative Biology(2006)10.1089/omi.2006.10.164
N/A
2.3DataRank · unranked
46 citations

Philippe Rocca-Serra, Weida Tong, Jennifer Fostel, Norman Morrison, Andrew R. Jones +3 more

The SEQC2 epigenomics quality control (EpiQC) study

Genome biology(2021)10.1186/s13059-021-02529-2
N/A
2.3DataRank · unranked
60 citations

Jessica Nordlund, Claudia Lalancette, Ting Gong, Michelle Lacey, Samantha Lent +52 more

Is Toxicogenomics a More Reliable and Sensitive Biomarker than Conventional Indicators from Rats To Predict Drug-Induced Liver Injury in Humans?

Chemical Research in Toxicology(2012)10.1021/tx200320e
N/A
2.1DataRank · unranked
56 citations

Minjun Chen, Weida Tong, Min Zhang

Chemical Effects in Biological Systems—Data Dictionary (CEBS-DD): A Compendium of Terms for the Capture and Integration of Biological Study Design Description, Conventional Phenotypes, and ‘Omics Data

Toxicological Sciences(2005)10.1093/toxsci/kfi315
Top 11%
2.0DataRank
Top 11%40 citations

Danielle Choi, Craig Zwickl, Norman Morrison, Asif Rashid, Atif Hasan +33 more

Incorporating the human gene annotations in different databases significantly improved transcriptomic and genetic analyses

RNA(2013)10.1261/rna.037473.112
Top 15%
1.3DataRank
Top 15%29 citations

Charles Wang, Leming Shi, Xiongfei Qu, Jiwei Chen, Jianmin Yang +7 more

Transparency and reproducibility in artificial intelligence

Nature(2020)10.1038/s41586-020-2766-y
N/A
0.929DataRank · unranked
487 citations

George Alexandru Adam, Ahmed Hosny, Farnoosh Khodakarami, Massive Analysis Quality Control (MAQC) Society Board of Directors, Matthias Fischer +26 more

Toward interoperable bioscience data

Nature Genetics(2012)10.1038/ng.1054
N/A
0.921DataRank · unranked
464 citations

Philippe Rocca-Serra, Dawn Field, Eamonn Maguire, Chris Taylor, Jessica I. Hoell +48 more

Reporting guidelines for human microbiome research: the STORMS checklist

Nature Medicine(2021)10.1038/s41591-021-01552-x
N/A
0.918DataRank · unranked
454 citations

Audrey Renson, Genomic Standards Consortium, Cesare Furlanello, Shaimaa Elsafoury, Ludwig Geistlinger +98 more

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

Bioinformatics(2010)10.1093/bioinformatics/btq415
N/A
0.855DataRank · unranked
297 citations

Marco Brandizi, Eamonn Maguire, Nataliya Sklyar, Chris Taylor, Kimberly Begley +10 more

Quartet RNA reference materials improve the quality of transcriptomic data through ratio-based profiling

Nature Biotechnology(2023)10.1038/s41587-023-01867-9
Top 28%
0.709DataRank
Top 28%41 citations

Wanwan Hou, Yaqing Liu, Haiyan Wang, Lianhua Dong, Yuanbang Mai +44 more

The emerging genomics and systems biology research lead to systems genomics studies

BMC Genomics(2014)10.1186/1471-2164-15-s11-i1
N/A
0.646DataRank · unranked
73 citations

Kenji Yoshigoe, William Yang, Weida Tong, Xiang Qin, A Keith Dunker +6 more

Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

Genome biology(2022)10.1186/s13059-021-02569-8
N/A
0.606DataRank · unranked
56 citations

Luyao Ren, Vitor Onuchic, Meijian Guan, Rebecca Kusko, Steve Bruinsma +50 more

Impact of RNA-seq data analysis algorithms on gene expression estimation and downstream prediction

Scientific Reports(2020)10.1038/s41598-020-74567-y
N/A
0.578DataRank · unranked
46 citations

Po-Yen Wu, John H. Phan, Hamid R. Hassazadeh, Wendell Jones, Leming Shi +21 more

Time for CHANGE: system-level interventions for bringing forward the date of effective use of NAMs in regulatory toxicology

Archives of Toxicology(2024)10.1007/s00204-024-03802-6
N/A
0.416DataRank · unranked
15 citations

Angela Bearth, Lowenna B Jones, Sebastian Hoffmann, Gunn Elisabeth Vist, Heather Ames +29 more

Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing

Scientific Data(2024)10.1038/s41597-024-03741-y
N/A
0.345DataRank · unranked
9 citations

Dan Li, Paweł P. Łabaj, Bohu Pan, Natalia Novoradovskaya, Danielle Thierry‐Mieg +20 more

Extend the benchmarking indel set by manual review using the individual cell line sequencing data from the Sequencing Quality Control 2 (SEQC2) project

Scientific Reports(2024)10.1038/s41598-024-57439-7
Top 57%
0.279DataRank
Top 57%5 citations

Dan Li, Yifan Zhang, Rebecca Kusko, Samir Lababidi, Zehui Cao +55 more

Integrative approaches for studying the role of noncoding RNAs in influencing drug efficacy and toxicity

Expert Opinion on Drug Metabolism & Toxicology(2022)10.1080/17425255.2022.2054802
N/A
0.269DataRank · unranked
5 citations

Minjun Chen, Huixiao Hong, Weida Tong, Baitang Ning, Dongying Li

PERform: assessing model performance with predictivity and explainability readiness formula

Journal of Environmental Science and Health Part C(2024)10.1080/26896583.2024.2340391
N/A
0.165DataRank · unranked
2 citations

Joshua Xu, Weida Tong, Weida Tong

A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency

Genome biology(2021)10.1186/s13059-021-02316-z
N/A
0DataRank · unranked
61 citations

Binsheng Gong, Natalia Novoradovskaya, Dan Li, Rebecca Kusko, Todd Richmond +69 more

Identification of Translational microRNA Biomarker Candidates for Ketoconazole-Induced Liver Injury Using Next-Generation Sequencing

Toxicological Sciences(2020)10.1093/toxsci/kfaa162
N/A
0DataRank · unranked
15 citations

Bridgett Knox, Binsheng Gong, Si Chen, Lei Guo, Zhichao Liu +3 more

AI-based language models powering drug discovery and development

Drug Discovery Today(2021)10.1016/j.drudis.2021.06.009
N/A
0DataRank · unranked
158 citations

Ruth Roberts, Madhu Lal‐Nag, Xi Chen, Ruili Huang, Weida Tong +1 more

Towards accurate and reliable resolution of structural variants for clinical diagnosis

Genome biology(2022)10.1186/s13059-022-02636-8
N/A
0DataRank · unranked
89 citations

Ruth Roberts, Tim R. Mercer, Joshua Xu, Fritz J. Sedlazeck, Weida Tong +1 more

50 shades of AI in regulatory science

Drug Discovery Today(2024)10.1016/j.drudis.2024.104058
N/A
0DataRank · unranked
6 citations

Szczepan W. Baran, Weida Tong

Microphysiological systems as an emerging in vitro approach for the evaluation of drug absorption, distribution, metabolism, and excretion and toxicity

Drug Metabolism and Disposition(2025)10.1016/j.dmd.2025.100187
N/A
0DataRank · unranked
7 citations

Dongying Li, Bridgett Knox, Weida Tong, Baitang Ning, Shivangi Shrimali

Leveraging AI to improve disease screening among American Indians: insights from the Strong Heart Study

Experimental Biology and Medicine(2025)10.3389/ebm.2024.10341
N/A
0DataRank · unranked
2 citations

Thomas McCall, Ying Zhang, Jessica Reese, Dong Wang, Weida Tong +1 more

Long noncoding RNA LINC00844-mediated molecular network regulates expression of drug metabolizing enzymes and nuclear receptors in human liver cells

Archives of Toxicology(2020)10.1007/s00204-020-02706-5
N/A
0DataRank · unranked
23 citations

Weida Tong, Bridgett Knox, Si Chen, William H. Tolleson, Fang Liu +5 more