Christiane Fuchs

Also affiliated with Hochschule Bielefeld, Helmholtz Zentrum München

MedicineMathematicsBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Additional file 2 of Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems

Figshare(2017)10.6084/m9.figshare.c.3810316_d2

Top 100%

0DataRank

Top 100%0 citations

Sabine Hug, Kathrin Hatz, Linus GĂśrlitz, Christiane Fuchs, Fabian Joachim Theis +1 more

Papers

Driven by 56 papers — median percentile 0. Top paper: “Atrx promotes heterochromatin formation at retrotransposons”.

Atrx promotes heterochromatin formation at retrotransposons

EMBO reports(2015)10.15252/embr.201439937

N/A

4.8DataRank · unranked

183 citations

Katharina Schmidt, Sophia Groh, Ivan Kondofersky, Joachim Ellwart, Christiane Fuchs +4 more

Network plasticity of pluripotency transcription factors in embryonic stem cells

Nature Cell Biology(2015)10.1038/ncb3237

N/A

4.5DataRank · unranked

141 citations

Carsten Marr, Simon Hastreiter, Justin Feigelman, Michael Schwarzfischer, Philipp S. Hoppe +10 more

Method of conditional moments (MCM) for the Chemical Master Equation

Journal of Mathematical Biology(2013)10.1007/s00285-013-0711-5

N/A

4.2DataRank · unranked

113 citations

V. Wolf, Christiane Fuchs, Verena Wolf, Atefeh Kazeroonian, Fabian Joachim Theis

Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks

PLOS Computational Biology(2017)10.1371/journal.pcbi.1005331

N/A

4.2DataRank · unranked

162 citations

Barbara Kaltenbacher, Fabian Joachim Theis, Christiane Fuchs, Fabian Fröhlich

Metabolite profiling reveals new insights into the regulation of serum urate in humans

Metabolomics(2013)10.1007/s11306-013-0565-2

N/A

3.4DataRank · unranked

71 citations

Melanie Waldenberger, Jan Krumsiek, Anne M. Evans, Ulli Jeratsch, Michaela Breier +19 more

Efficient Parameter Estimation Enables the Prediction of Drug Response Using a Mechanistic Pan-Cancer Pathway Model

Cell Systems(2018)10.1016/j.cels.2018.10.013

N/A

3.4DataRank · unranked

156 citations

Daniel Weindl, Alexey Shadrin, Leonard Schmiester, Hendrik Hache, Artur Muradyan +11 more

Inferring population dynamics from single-cell RNA-sequencing time series data

Nature Biotechnology(2019)10.1038/s41587-019-0088-0

N/A

3.2DataRank · unranked

124 citations

Anna K. Fiedler, Eric M. Kernfeld, Ryan M. J. Genga, Aimée Bastidas-Ponce, Mostafa Bakhti +6 more

Protocol of a population-based prospective COVID-19 cohort study Munich, Germany (KoCo19)

BMC Public Health(2020)10.1186/s12889-020-09164-9

N/A

2.6DataRank · unranked

65 citations

Elmar Saathoff, Michael Pritsch, Jessica Michelle Guggenbühl Noller, Inge Kroidl, Laura Olbrich +31 more

Uncertainty Analysis for Non-identifiable Dynamical Systems: Profile Likelihoods, Bootstrapping and More

Lecture Notes in Computer Science(2014)10.1007/978-3-319-12982-2_5

N/A

2.2DataRank · unranked

61 citations

Fabian Joachim Theis, Christiane Fuchs, Fabian Fröhlich

Wound-healing growth factor, basic FGF, induces Erk1/2-dependent mechanical hyperalgesia

Pain(2013)10.1016/j.pain.2013.07.005

N/A

2.1DataRank · unranked

48 citations

Christiane Fuchs, Hye-Sook Ahn, Elizabeth K. Joseph, Jörg Isensee, Fabian Joachim Theis +9 more

Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems

BMC Systems Biology(2017)10.1186/s12918-017-0433-1

N/A

2.0DataRank · unranked

56 citations

Sabine Hug, Kathrin Hatz, Linus Görlitz, Christiane Fuchs, Fabian Joachim Theis +1 more

High-dimensional Bayesian parameter estimation: Case study for a model of JAK2/STAT5 signaling

Mathematical Biosciences(2013)10.1016/j.mbs.2013.04.002

N/A

1.8DataRank · unranked

71 citations

J. Bachmann, Sabine Hug, Andreas Raue, Christiane Fuchs, Jasmin Bachmann +3 more

CERENA: ChEmical REaction Network Analyzer—A Toolbox for the Simulation and Analysis of Stochastic Chemical Kinetics

PLOS ONE(2016)10.1371/journal.pone.0146732

N/A

1.8DataRank · unranked

44 citations

Fabian Fröhlich, Andreas Raue, Fabian Joachim Theis, Christiane Fuchs, Atefeh Kazeroonian

ODE Constrained Mixture Modelling: A Method for Unraveling Subpopulation Structures and Dynamics

PLoS Computational Biology(2014)10.1371/journal.pcbi.1003686

N/A

1.7DataRank · unranked

58 citations

Christine Hasenauer, Tim Hucho, Fabian Joachim Theis, Christiane Fuchs

Systemic alterations in neutrophils and their precursors in early-stage chronic obstructive pulmonary disease

Cell Reports(2023)10.1016/j.celrep.2023.112525

N/A

1.7DataRank · unranked

74 citations

Kevin Baßler, Wataru Fujii, Christina Nalkurthi, Anna Christina Schaar, Lorenzo Bonaguro +50 more

Increasing Neural Stem Cell Division Asymmetry and Quiescence Are Predicted to Contribute to the Age-Related Decline in Neurogenesis

Cell Reports(2018)10.1016/j.celrep.2018.11.088

N/A

1.6DataRank · unranked

50 citations

Filippo Calzolari, Christiane Fuchs, Fabian Joachim Theis, Jovica Ninkovic, Carsten Marr +2 more

Parameter estimation for dynamical systems with discrete events and logical operations

Bioinformatics(2016)10.1093/bioinformatics/btw764

N/A

1.4DataRank · unranked

42 citations

Fabian Joachim Theis, J. O. Rädler, Christiane Fuchs, Fabian Fröhlich

Sharpening of expression domains induced by transcription and microRNA regulationwithin a spatio-temporal model of mid-hindbrain boundary formation

BMC Systems Biology(2013)10.1186/1752-0509-7-48

N/A

1.2DataRank · unranked

22 citations

Yen-Kar Ng, Christiane Fuchs, Dominik Lutter, Dietrich Trümbach, Wolfgang Wurst +4 more

Multi-experiment nonlinear mixed effect modeling of single-cell translation kinetics after transfection

npj Systems Biology and Applications(2018)10.1038/s41540-018-0079-7

N/A

1.2DataRank · unranked

33 citations

Anita Reiser, Laura Fink, Daniel Woschée, Thomas Ligon, Fabian Joachim Theis +3 more

Alveolar macrophages in early stage COPD show functional deviations with properties of impaired immune activation

Frontiers in Immunology(2022)10.3389/fimmu.2022.917232

N/A

1.1DataRank · unranked

50 citations

Wataru Fujii, Theodore S. Kapellos, Erika Dudkin, Nico Reusch, Ari Horne +44 more

Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles

Proceedings of the National Academy of Sciences(2014)10.1073/pnas.1311647111

N/A

1.1DataRank · unranked

57 citations

Christiane Fuchs, Andreas Roller, Fabian Joachim Theis, Kevin A. Janes, Sameer S. Bajikar

Tailored parameter optimization methods for ordinary differential equation models with steady-state constraints

BMC Systems Biology(2016)10.1186/s12918-016-0319-7

N/A

0.954DataRank · unranked

31 citations

Sebastian Raeth, Fabian Joachim Theis, Angelika Hausser, Christiane Fuchs, Angelika Haußer +1 more

Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems

Bioinformatics(2015)10.1093/bioinformatics/btv405

N/A

0.836DataRank · unranked

263 citations

B. Steiert, T. Maiwald, H. Hass, C. Tönsing, L. Adlung +26 more

Modeling of stochastic biological processes with non-polynomial propensities using non-central conditional moment equation

IFAC Proceedings Volumes(2014)10.3182/20140824-6-za-1003.02298

N/A

0.791DataRank · unranked

13 citations

Fabian Joachim Theis, Christiane Fuchs, Atefeh Kazeroonian

Modeling of 2D diffusion processes based on microscopy data: parameter estimation and practical identifiability analysis

BMC Bioinformatics(2013)10.1186/1471-2105-14-s10-s7

N/A

0.747DataRank · unranked

15 citations

Christiane Fuchs, Fabian Joachim Theis, Sabrina Hock

netReg: network-regularized linear models for biological association studies

Bioinformatics(2017)10.1093/bioinformatics/btx677

N/A

0.724DataRank · unranked

26 citations

Christiane Fuchs, Nikola S. Mueller, Fabian Joachim Theis, Simon Dirmeier

Data-Driven Modelling of Biological Multi-Scale Processes

Journal of Coupled Systems and Multiscale Dynamics(2015)10.1166/jcsmd.2015.1069

N/A

0.680DataRank · unranked

40 citations

Nick Jagiella, Sabrina Hross, Fabian Joachim Theis, Christiane Fuchs

Parallelization and High-Performance Computing Enables Automated Statistical Inference of Multi-scale Models

Cell Systems(2017)10.1016/j.cels.2016.12.002

N/A

0.624DataRank · unranked

63 citations

Dennis Rickert, Fabian Joachim Theis, Christiane Fuchs, Nick Jagiella

Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines

PLOS Computational Biology(2020)10.1371/journal.pcbi.1007147

N/A

0.599DataRank · unranked

12 citations

Simone Keller, Gwen Zwingenberger, Karolin Ebert, Sabine Hug, Fabian Joachim Theis +4 more

Approximate Bayesian Computation for Stochastic Single-Cell Time-Lapse Data Using Multivariate Test Statistics

Lecture Notes in Computer Science(2015)10.1007/978-3-319-23401-4_6

N/A

0.599DataRank · unranked

10 citations

Carsten Marr, Fabian Joachim Theis, Christiane Fuchs, Carolin Loos

Model selection using limiting distributions of second-order blind source separation algorithms

Signal Processing(2015)10.1016/j.sigpro.2015.01.017

N/A

0.515DataRank · unranked

30 citations

Jari Miettinen, Christiane Fuchs, Sara Taskinen, Klaus Nordhausen, Hannu Oja +3 more

BioSimulators: a central registry of simulation engines and services for recommending specific tools

Nucleic Acids Research(2022)10.1093/nar/gkac331

N/A

0.489DataRank · unranked

25 citations

Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon +71 more

MEMO: multi-experiment mixture model analysis of censored data

Bioinformatics(2016)10.1093/bioinformatics/btw190

N/A

0.456DataRank · unranked

7 citations

Christiane Fuchs, Stephanie Heinrich, Silke Hauf, Fabian Joachim Theis, Eva‐Maria Geissen +2 more

Asthma in farm children is more determined by genetic polymorphisms and in non‐farm children by environmental factors

Pediatric Allergy and Immunology(2020)10.1111/pai.13385

N/A

0.442DataRank · unranked

18 citations

Michael Kabesch, Elisabeth Horak, Charlotte Braun‐Fahrländer, Jon Genuneit, Andrzej Boznanski +7 more

Bayesian Blind Source Separation for Data with Network Structure

Journal of Computational Biology(2014)10.1089/cmb.2014.0117

N/A

0.419DataRank · unranked

5 citations

Christiane Fuchs, Fabian Joachim Theis, Katrin Illner

Alterations of multiple alveolar macrophage states in chronic obstructive pulmonary disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.28.121541

N/A

0.385DataRank · unranked

12 citations

Wataru Fujii, Theodore S. Kapellos, Arik Horne, Benedikt Reiz, Erika Dudkin +41 more

Radial Basis Function Approximations of Bayesian Parameter Posterior Densities for Uncertainty Analysis

Lecture Notes in Computer Science(2014)10.1007/978-3-319-12982-2_6

N/A

0.375DataRank · unranked

6 citations

Sabrina Hross, Fabian Joachim Theis, Christiane Fuchs, Fabian Fröhlich

Multi-Experiment Nonlinear Mixed Effect Modeling of Single-Cell Translation Kinetics after Transfection

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/285478

N/A

0.373DataRank · unranked

11 citations

L. Fink, Thomas Ligon, Fabian Joachim Theis, J. O. Rädler, Christiane Fuchs +3 more

Efficient parameterization of large-scale mechanistic models enables drug response prediction for cancer cell lines

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/174094

N/A

0.373DataRank · unranked

11 citations

Thomas Kessler, Daniel Weindl, Alexey Shadrin, Leonard Schmiester, Hendrik Hache +11 more

Publisher Correction: Multi-experiment nonlinear mixed effect modeling of single-cell translation kinetics after transfection

npj Systems Biology and Applications(2019)10.1038/s41540-019-0083-6

N/A

0.363DataRank · unranked

4 citations

Anita Reiser, Laura Fink, Daniel Woschée, Thomas Ligon, Fabian Joachim Theis +3 more

iVUN: interactive Visualization of Uncertain biochemical reaction Networks

BMC Bioinformatics(2013)10.1186/1471-2105-14-s19-s2

N/A

0.360DataRank · unranked

10 citations

Christiane Fuchs, Andrei Kramer, Andreas Raue, Sabine Hug, Jens Timmer +4 more

Identifiability analysis for models of the translation kinetics after mRNA transfection

Journal of Mathematical Biology(2022)10.1007/s00285-022-01739-x

N/A

0.326DataRank · unranked

5 citations

Jan Hasenauer, Christiane Fuchs, Susanne Pieschner

Large-scale modeling of cancer signaling: Mechanistic modeling meets Big Data

European Journal of Cancer(2016)10.1016/s0959-8049(16)32716-2

N/A

0.316DataRank · unranked

2 citations

T. Kessler, Anja Thormann, Fabian Fröhlich, Alexey Shadrin, Torsten Keßler +6 more

Socioeconomic and risk-related drivers of compliance with measures to prevent SARS-CoV-2 infection: evidence from the Munich-based KoCo19 study

BMC Public Health(2023)10.1186/s12889-023-15759-9

N/A

0.315DataRank · unranked

6 citations

Michael Laxy, Katja Radon, Ronan Le Gleut, Noemi Castelletti, Jessica Michelle Guggenbüehl Noller +33 more

Quantitative comparison of competing PDE models for Pomlp dynamics in fission yeast * *The authors acknowledge financial support from the Postdoctoral Fellowship Program (PFP) of the Helmholtz Zentrum Munchen.

IFAC-PapersOnLine(2016)10.1016/j.ifacol.2016.12.136

N/A

0.165DataRank · unranked

2 citations

Anna K. Fiedler, Fabian Joachim Theis, Christiane Fuchs, Sabrina Hross

LNA++: Linear Noise Approximation with First and Second Order Sensitivities

Lecture Notes in Computer Science(2018)10.1007/978-3-319-99429-1_19

N/A

0.126DataRank · unranked

1 citations

Daniel Weindl, Fabian Joachim Theis, Carsten Marr, Christiane Fuchs, Justin Feigelman

Identifiability analysis for models of the translation kinetics after mRNA transfection

bioRxiv (Cold Spring Harbor Laboratory)10.1101/2021.05.18.444633

N/A

0.104DataRank · unranked

1 citations

Jan Hasenauer, Christiane Fuchs, Susanne Pieschner

Inferring catalysis in biological systems

IET Systems Biology(2016)10.1049/iet-syb.2015.0087

N/A

0.104DataRank · unranked

1 citations

Fabian Joachim Theis, Christiane Fuchs, Ivan Kondofersky

Impact of Brain Fatty Acid Signaling on Peripheral Insulin Action in Mice

Experimental and Clinical Endocrinology & Diabetes(2018)10.1055/a-0735-9533

N/A

0.104DataRank · unranked

1 citations

Moya Wu, Christiane Fuchs, Ivan Kondofersky, Fabian Joachim Theis, Martin Hrabé de Angelis +4 more

Scalable parameter estimation for genome-scale biochemical reaction networks

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/089086

N/A

0.104DataRank · unranked

1 citations

Barbara Kaltenbacher, Fabian Joachim Theis, Christiane Fuchs, Fabian Fröhlich

Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/656967

N/A

0DataRank · unranked

0 citations

Simone Keller, Gwen Zwingenberger, Karolin Ebert, Sabine Hug, Fabian Joachim Theis +4 more

Additional file 2 of Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems

Figshare(2017)10.6084/m9.figshare.c.3810316_d2

Top 100%

0DataRank

Top 100%0 citations

Sabine Hug, Kathrin Hatz, Linus GĂśrlitz, Christiane Fuchs, Fabian Joachim Theis +1 more

Supplementary material from "Mechanistic description of spatial processes using integrative modelling of noise-corrupted imaging data"

Figshare(2018)10.6084/m9.figshare.c.4324007.v1

N/A

0DataRank · unranked

0 citations

Fabian Joachim Theis, Michael Sixt, Christiane Fuchs, Sabrina Hross

Mechanistic description of spatial processes using integrative modelling of noise-corrupted imaging data

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/284547

N/A

0DataRank · unranked

0 citations

Fabian Joachim Theis, Michael Sixt, Christiane Fuchs, Sabrina Hross

Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines

Zenodo (CERN European Organization for Nuclear Research)(2019)10.5281/zenodo.2908234

Top 100%

0DataRank

Top 100%0 citations

Simone Keller, Gwen Zwingenberger, Karolin Ebert, Sabine Hug, Fabian Joachim Theis +4 more

pheno-seq – linking morphological features to gene expression in 3D cell culture systems

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/311472

N/A

0DataRank · unranked

0 citations

Jeongbin Park, Friedrich Preußer, Lisa Amrhein, Zuguang Gu, Simon Steiger +14 more

Christiane Fuchs

Indexed papers

Top data-sharing exemplar

Papers