João B. Xavier

Biochemistry, Genetics and Molecular BiologyMedicineNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients

Scientific Data(2021)10.1038/s41597-021-00860-8

Top 22%

0.925DataRank

Top 22%54 citations

Bradford P. Taylor, Camilla Ceccarani, Emily Fontana, Luigi A. Amoretti, Roberta J. Wright +10 more

Papers

Driven by 32 papers — median percentile 59. Top paper: “Regenerative lineages and immune-mediated pruning in lung cancer metastasis”.

Regenerative lineages and immune-mediated pruning in lung cancer metastasis

Nature Medicine(2020)10.1038/s41591-019-0750-6

N/A

9.1DataRank · unranked

504 citations

Jing Hu, Nathaniel R. Campbell, Samuel F. Bakhoum, Manu Setty, Vincent‐Philippe Lavallée +14 more

The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View

Trends in cancer(2020)10.1016/j.trecan.2020.01.004

N/A

6.0DataRank · unranked

268 citations

Vincent B. Young, Joseph D. Skufca, Fiona Ginty, Traci L. Testerman, Alexander T. Pearson +25 more

Evolution and regulation of microbial secondary metabolism

eLife(2022)10.7554/elife.76119

N/A

1.2DataRank · unranked

61 citations

Chen Liao, Chloe Lindberg, Yanyan Chen, Zhe Wang, Kyu Y. Rhee +4 more

Microbiota as Predictor of Mortality in Allogeneic Hematopoietic-Cell Transplantation

New England Journal of Medicine(2020)10.1056/nejmoa1900623

N/A

0.995DataRank · unranked

757 citations

Antonio L. C. Gomes, Sean M. Devlin, Eric R. Littmann, Ying Taur, Anthony D. Sung +47 more

Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients

Scientific Data(2021)10.1038/s41597-021-00860-8

Top 22%

0.925DataRank

Top 22%54 citations

Bradford P. Taylor, Camilla Ceccarani, Emily Fontana, Luigi A. Amoretti, Roberta J. Wright +10 more

Compositional Lotka-Volterra describes microbial dynamics in the simplex

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007917

N/A

0.648DataRank · unranked

74 citations

Liat Shenhav, João B. Xavier, Eran Halperin, Itsik Pe’er, Tyler Joseph

High-resolution analyses of associations between medications, microbiome, and mortality in cancer patients

Cell(2023)10.1016/j.cell.2023.05.007

N/A

0.609DataRank · unranked

57 citations

Kate A. Markey, Oriana Miltiadous, Anqi Dai, Nicholas R. Waters, Keimya Sadeghi +27 more

Fatty acid oxidation fuels natural killer cell responses against infection and cancer

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2319254121

N/A

0.596DataRank · unranked

52 citations

Katja Srpan, Wendy Lin, Mariah Lee, Rebecca B. Delconte, Mark Owyong +6 more

A High Fraction of Oral Bacteria in the Feces Indicates Gut Microbiota Depletion with Implications for Human Health

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.24.513595

N/A

0.312DataRank · unranked

7 citations

Thierry Rolling, Ana Djuković, Teng Fei, Vishwas Mishra, Hongbin Liu +8 more

A compilation of fecal microbiome shotgun metagenomics from hospitalized patients undergoing hematopoietic cell transplantation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.23.457365

Top 59%

0.255DataRank

Top 59%4 citations

Chen Liao, Bradford P. Taylor, Emily Fontana, Luigi A. Amoretti, Roberta J. Wright +12 more

Optimizing the future: how mathematical models inform treatment schedules for cancer

Trends in cancer(2022)10.1016/j.trecan.2022.02.005

N/A

0DataRank · unranked

49 citations

Ethan Barnett, Howard I. Scher, João B. Xavier, Deepti Mathur

Mathematical models to study the biology of pathogens and the infectious diseases they cause

iScience(2022)10.1016/j.isci.2022.104079

N/A

0DataRank · unranked

22 citations

Jonathan M. Monk, Saugat Poudel, Charles J. Norsigian, Anand V. Sastry, Chen Liao +15 more

Echinocandin heteroresistance causes prophylaxis failure and facilitates breakthrough Candida parapsilosis infection

medRxiv(2022)10.1101/2022.05.29.22275734

N/A

0DataRank · unranked

6 citations

Chen Liao, Siddharth Jaggavarapu, Yuanyuan Tang, Thierry Rolling, Yating Ning +13 more

Relative enrichment of oral bacteria in feces indicates loss of intestinal commensals with implications for host health

Research Square(2022)10.21203/rs.3.rs-2199823/v1

N/A

0DataRank · unranked

3 citations

Thierry Rolling, Ana Djuković, Hongbin Liu, Lei Dai, Bing Zhai +5 more

The TaxUMAP atlas: efficient display of large clinical microbiome data reveals ecological competition involved in protection against bacteremia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.27.509746

N/A

0DataRank · unranked

1 citations

Ana Djuković, Bradford P. Taylor, Jinyuan Yan, Caichen Duan, Grant Hussey +15 more

The Ratio of Key Metabolic Transcripts Is a Predictive Biomarker of Breast Cancer Metastasis to the Lung

Cancer Research(2023)10.1158/0008-5472.can-23-0153

N/A

0DataRank · unranked

20 citations

Chen Liao, Wendy Lin, Alessandro La Ferlita, Salvatore Alaimo, Samuel Taylor +5 more

The TaxUMAP atlas: Efficient display of large clinical microbiome data reveals ecological competition in protection against bacteremia

Cell Host & Microbe(2023)10.1016/j.chom.2023.05.027

N/A

0DataRank · unranked

23 citations

Ana Djuković, Bradford P. Taylor, Jinyuan Yan, Caichen Duan, Grant Hussey +15 more

Machine learning of cellular metabolic rewiring

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.11.552957

N/A

0DataRank · unranked

0 citations

João B. Xavier

Oral bacteria relative abundance in faeces increases due to gut microbiota depletion and is linked with patient outcomes

Nature Microbiology(2024)10.1038/s41564-024-01680-3

N/A

0DataRank · unranked

85 citations

Thierry Rolling, Ana Djuković, Teng Fei, Vishwas Mishra, Hongbin Liu +8 more

Antifungal heteroresistance causes prophylaxis failure and facilitates breakthrough Candida parapsilosis infections

Nature Medicine(2024)10.1038/s41591-024-03183-4

N/A

0DataRank · unranked

55 citations

Chen Liao, Siddharth Jaggavarapu, Yuanyuan Tang, Thierry Rolling, Yating Ning +13 more

Machine learning of cellular metabolic rewiring

Biology Methods and Protocols(2024)10.1093/biomethods/bpae048

N/A

0DataRank · unranked

1 citations

João B. Xavier

Assessing Engraftment Following Fecal Microbiota Transplant

PubMed(2024)10.48550/arxiv.2404.07325

N/A

0DataRank · unranked

2 citations

Bridget M. Barker, Thais Fernanda Bartelli, Vidhi Chandra, Rosa Krajmalnik‐Brown, Mary Jewell +7 more

Reciprocal signaling between quorum sensing mutants: A model for division of labor.

PubMed(2024)10.17912/micropub.biology.001326

N/A

0DataRank · unranked

0 citations

João B. Xavier, Farah Abdul‐Rahman

Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence

PLoS Computational Biology(2020)10.1371/journal.pcbi.1008135

N/A

0DataRank · unranked

60 citations

Tong Wang, Sergei Maslov, João B. Xavier, Chen Liao

Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.19.956383

N/A

0DataRank · unranked

3 citations

Tong Wang, Sergei Maslov, João B. Xavier, Chen Liao

Evolution and regulation of microbial secondary metabolism

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.280495

N/A

0DataRank · unranked

3 citations

Chen Liao, Zhe Wang, Kyu Y. Rhee, Francisco Pinto, Jinyuan Yan +2 more

Divergent use of metabolic fluxes in breast cancer metastasis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.03.234468

N/A

0DataRank · unranked

0 citations

Chen Liao, Alessandro La Ferlita, Salvatore Alaimo, Alfredo Ferro, João B. Xavier +1 more

Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation

Developmental Cell(2021)10.1016/j.devcel.2021.08.018

N/A

0DataRank · unranked

100 citations

Anjali Rao, Miranda Hunter, Magdalena K. Sznurkowska, Luzia Briker, Maomao Zhang +24 more

Haematopoietic cell transplantation outcomes are linked to intestinal mycobiota dynamics and an expansion of Candida parapsilosis complex species

Nature Microbiology(2021)10.1038/s41564-021-00989-7

N/A

0DataRank · unranked

86 citations

Bing Zhai, Mergim Gjonbalaj, Nicholas L. Tosini, Keiko Yasuma-Mitobe, Emily Fontana +11 more

Listening in on the conversation between the human gut microbiome and its host

Current Opinion in Microbiology(2021)10.1016/j.mib.2021.07.009

N/A

0DataRank · unranked

8 citations

Ana Djuković, Deepti Mathur, João B. Xavier, Wendy Lin

Intestinal fungal dynamics and linkage to hematopoietic cell transplantation outcomes

medRxiv(2021)10.1101/2021.07.20.21260859

N/A

0DataRank · unranked

1 citations

Bing Zhai, Mergim Gjonbalaj, Nicholas L. Tosini, Keiko Yasuma-Mitobe, Emily Fontana +11 more

Lactobacillus supports Clostridiales to restrict gut colonization by multidrug-resistant Enterobacteriaceae

Nature Communications(2022)10.1038/s41467-022-33313-w

N/A

0DataRank · unranked

84 citations

María José Garzón, Cécile Canlet, Vitor Cabral, Rym Lalaoui, Marc Garcia‐Garcerà +17 more

João B. Xavier

Indexed papers

Top data-sharing exemplar

Papers