🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Chengyu Deng

University of California, San Francisco

ORCID: 0000-0003-3595-9935
Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.7Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex

Science(2024)10.1126/science.adh1938
Top 18%
1.2DataRank
Top 18%69 citations

Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo +90 more

Papers

Driven by 17 papers — median percentile 74. Top paper: “Single-cell multi-cohort dissection of the schizophrenia transcriptome”.

Single-cell multi-cohort dissection of the schizophrenia transcriptome

Science(2024)10.1126/science.adg5136
N/A
1.3DataRank · unranked
125 citations

Shahin Mohammadi, José Dávila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan +196 more

A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex

Science(2024)10.1126/science.adh1938
Top 18%
1.2DataRank
Top 18%69 citations

Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo +90 more

Massively parallel characterization of regulatory elements in the developing human cortex

Science(2024)10.1126/science.adh0559
N/A
1.2DataRank · unranked
61 citations

Sean Whalen, Marilyn Steyert, Ryan Ziffra, Pawel F. Przytycki, Fumitaka Inoue +197 more

Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain

Science(2024)10.1126/science.adh0829
Top 26%
0.765DataRank
Top 26%50 citations

Michael Margolis, Rujia Dai, Pan Zhang, Pawel F. Przytycki, Daniel Vo +95 more

Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders

Science Translational Medicine(2024)10.1126/scitranslmed.adh9974
Top 27%
0.733DataRank
Top 27%22 citations

Cuihua Xia, Yi Jiang, Yu Chen, Jiaqi Zhou, Rujia Dai +95 more

Fusobacterium nucleatum infection modulates the transcriptome and epigenome of HCT116 colorectal cancer cells in an oxygen-dependent manner

Communications Biology(2024)10.1038/s42003-024-06201-w
N/A
0.606DataRank · unranked
56 citations

Zirui Zhou, Raffae N. Ahmad, Polina Sobol, Chengyu Deng, Tam T. D. Nguyen +7 more

Effects of Culture Condition on Epigenomic Profiles of Brain Tumor Cells

ACS Biomaterials Science & Engineering(2019)10.1021/acsbiomaterials.9b00161
N/A
0.553DataRank · unranked
17 citations

Chengyu Deng, Lynette B. Naler, Chang Lu, Scott S. Verbridge, Megan C. Cox

Genetic regulation of cell-type specific chromatin accessibility shapes the etiology of brain diseases

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.02.530826
N/A
0.330DataRank · unranked
7 citations

Jaroslav Bendl, Chengyu Deng, Donghoon Lee, Ruth Misir, Sarah Reach +10 more

Antipsychotic-induced epigenomic reorganization in frontal cortex of individuals with schizophrenia

eLife(2023)10.7554/elife.92393
N/A
0.217DataRank · unranked
3 citations

Richard I. Ainsworth, Zengmiao Wang, Zhengzhi Liu, Salvador Sierra, Chengyu Deng +6 more

Epigenomic tomography for probing spatially defined chromatin state in the brain

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100738
N/A
0DataRank · unranked
6 citations

Chengyu Deng, Zirui Zhou, Ya Xiao, Shan Jiang, Bohan Zhu +5 more

Native MOWChIP-seq: Genome-wide profiles of key protein bindings reveal functional differences among various brain regions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.11.451963
N/A
0DataRank · unranked
0 citations

Lynette B. Naler, Yan Zhu, Chengyu Deng, Qiang Zhang, Bohan Zhu +6 more

Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation

Nature Communications(2022)10.1038/s41467-022-28659-0
N/A
0DataRank · unranked
47 citations

Tal Ashuach, Fumitaka Inoue, Alex Khodaverdian, Chengyu Deng, Nir Yosef +2 more

nMOWChIP-seq: low-input genome-wide mapping of non-histone targets

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac030
N/A
0DataRank · unranked
10 citations

Lynette B. Naler, Yan Zhu, Chengyu Deng, Qiang Zhang, Bohan Zhu +6 more

Three-dimensional genome re-wiring in loci with Human Accelerated Regions

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.04.510859
N/A
0DataRank · unranked
15 citations

Sean Whalen, Fumitaka Inoue, Pawel F. Przytycki, Tyler Fair, Chengyu Deng +9 more

Massively parallel characterization of psychiatric disorder-associated and cell-type-specific regulatory elements in the developing human cortex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.15.528663
N/A
0DataRank · unranked
18 citations

Sean Whalen, Marilyn Steyert, Ryan Ziffra, Pawel F. Przytycki, Fumitaka Inoue +9 more

Antipsychotic-induced epigenomic reorganization in frontal cortex of individuals with schizophrenia

(2023)10.7554/elife.92393.1
N/A
0DataRank · unranked
0 citations

Richard I. Ainsworth, Zengmiao Wang, Zhengzhi Liu, Salvador Sierra, Chengyu Deng +6 more

Antipsychotic-induced epigenomic reorganization in frontal cortex of individuals with schizophrenia

eLife(2024)10.7554/elife.92393.3
N/A
0DataRank · unranked
8 citations

Richard I. Ainsworth, Zengmiao Wang, Zhengzhi Liu, Salvador Sierra, Chengyu Deng +6 more