Bokai Zhu

Also affiliated with Ragon Institute of MGH, MIT and Harvard, IIT@MIT, Massachusetts Institute of Technology, Stanford University

Biochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.898Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.07.574538

Top 22%

0.898DataRank

Top 22%34 citations

Orr Ashenberg, Natalie B. Collins, Åsa Segerstolpe, Sizun Jiang, Michal Slyper +53 more

Papers

Driven by 18 papers — median percentile 78. Top paper: “Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma”.

Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma

Cell(2020)10.1016/j.cell.2020.05.039

N/A

10.2DataRank · unranked

1137 citations

Adam J. Rubin, Kim Thrane, Sizun Jiang, David L. Reynolds, Robin M. Meyers +16 more

Subcellular localization of biomolecules and drug distribution by high-definition ion beam imaging

Nature Communications(2021)10.1038/s41467-021-24822-1

N/A

2.2DataRank · unranked

72 citations

Sizun Jiang, Yun Bai, Bokai Zhu, Graham L. Barlow, Salil S. Bhate +8 more

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.07.574538

Top 22%

0.898DataRank

Top 22%34 citations

Orr Ashenberg, Natalie B. Collins, Åsa Segerstolpe, Sizun Jiang, Michal Slyper +53 more

SARS-CoV-2 infects human pancreatic β cells and elicits β cell impairment

Cell Metabolism(2021)10.1016/j.cmet.2021.05.013

N/A

0.887DataRank · unranked

370 citations

Peter V. Lidsky, Yinghong Xiao, Ivan T. Lee, Ran Cheng, Tsuguhisa Nakayama +16 more

T cell-mediated curation and restructuring of tumor tissue coordinates an effective immune response

Cell Reports(2023)10.1016/j.celrep.2023.113494

N/A

0.785DataRank · unranked

32 citations

Maximillian Haist, Nina B. Horowitz, Chiara Caraccio, Yuqi Tan, Andrew J. Rech +11 more

Integration of spatial and single-cell data across modalities with weakly linked features

Nature Biotechnology(2023)10.1038/s41587-023-01935-0

N/A

0.698DataRank · unranked

104 citations

Bokai Zhu, Sijia Huang, John W. Hickey, Kevin Lin, Michael P. Snyder +5 more

Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments

Immunity(2022)10.1016/j.immuni.2022.03.020

N/A

0.681DataRank · unranked

93 citations

Chi Ngai Chan, Xavier Rovira‐Clavé, Han Chen, Yunhao Bai, Bokai Zhu +27 more

A TBK1-independent primordial function of STING in lysosomal biogenesis

Molecular Cell(2024)10.1016/j.molcel.2024.08.026

N/A

0.626DataRank · unranked

64 citations

William Dion, Haoxiang Yang, Jinrui Xun, Do‐Hyung Kim, Bokai Zhu +2 more

Adjacent Cell Marker Lateral Spillover Compensation and Reinforcement for Multiplexed Images

Frontiers in Immunology(2021)10.3389/fimmu.2021.652631

N/A

0.624DataRank · unranked

63 citations

Bokai Zhu, Xavier Rovira‐Clavé, Han Chen, Maxim Markovic, Chi Ngai Chan +7 more

Spatial epitope barcoding reveals clonal tumor patch behaviors

Cancer Cell(2022)10.1016/j.ccell.2022.09.014

N/A

0.553DataRank · unranked

39 citations

Alexandros P. Drainas, Sizun Jiang, Yunhao Bai, Maya Baron, Bokai Zhu +15 more

Determinants of SARS-CoV-2 entry and replication in airway mucosal tissue and susceptibility in smokers

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100421

N/A

0.510DataRank · unranked

29 citations

Ivan T. Lee, Sizun Jiang, Matthias S. Matter, Carol H. Yan, Jonathan B. Overdevest +38 more

Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology

Nature Communications(2023)10.1038/s41467-023-39616-w

N/A

0.494DataRank · unranked

26 citations

Bokai Zhu, John-Paul Oliveria, Bryan J. Cannon, Dorien Feyaerts, Marc Bossé +15 more

Multi-scaled transcriptomics of chronically inflamed nasal epithelium reveals immune-epithelial dynamics and tissue remodeling in nasal polyp formation

Immunity(2025)10.1016/j.immuni.2025.08.009

N/A

0.416DataRank · unranked

15 citations

Tsuguhisa Nakayama, Bokai Zhu, Ivan T. Lee, Jason Yeung, Yao Yu Yeo +31 more

A Hitchhiker's guide to high-dimensional tissue imaging with multiplexed ion beam imaging

Methods in cell biology(2024)10.1016/bs.mcb.2024.02.018

N/A

0.269DataRank · unranked

5 citations

Precious Cramer, Addison Deisher, Yunhao Bai, Bokai Zhu, Wan-Jin Yeo +4 more

Robust Single-cell Matching and Multi-modal Analysis Using Shared and Distinct Features Reveals Orchestrated Immune Responses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.03.471185

N/A

0.269DataRank · unranked

5 citations

Shuxiao Chen, Yunhao Bai, Han Chen, Nilanjan Mukherjee, Gustavo Vazquez +9 more

A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583400

N/A

0.241DataRank · unranked

4 citations

Yunhao Bai, Yao Yu Yeo, Xiaowei Lu, Xavier Rovira‐Clavé, Han Chen +7 more

Epstein-Barr Virus Orchestrates Spatial Reorganization and Immunomodulation within the Classic Hodgkin Lymphoma Tumor Microenvironment

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.05.583586

N/A

0.211DataRank · unranked

3 citations

Huaying Qiu, Yunhao Bai, Bokai Zhu, Yuzhou Chang, Jason Yeung +31 more

MAPS: pathologist-level cell type annotation from tissue images through machine learning

Nature Communications(2024)10.1038/s41467-023-44188-w

N/A

0DataRank · unranked

50 citations

Yunhao Bai, Huaying Qiu, Shulin Mao, Jason Yeung, Yao Yu Yeo +10 more

Bokai Zhu

Indexed papers

Top data-sharing exemplar

Papers