Nikolaos G. Sgourakis

Stanford University

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Computational design of closely related proteins that adopt two well-defined but structurally divergent folds”.

Computational design of closely related proteins that adopt two well-defined but structurally divergent folds

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1914808117

N/A

2.1DataRank · unranked

63 citations

Danai Moschidi, Matthew J. Bick, Santrupti Nerli, Andrew C. McShan, Lauren Carter +6 more

Reconstruction of Coupled Intra- and Interdomain Protein Motion from Nuclear and Electron Magnetic Resonance

Journal of the American Chemical Society(2021)10.1021/jacs.1c06289

N/A

0.510DataRank · unranked

29 citations

Janne Soetbeer, Frauke D. Breitgoff, Morkos A. Henen, Nikolaos G. Sgourakis, Yevhen Polyhach +5 more

Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion

Science Immunology(2023)10.1126/sciimmunol.adj5792

N/A

0.464DataRank · unranked

21 citations

Tyler J. Florio, S. K. Gupta, Michael C. Young, Quinlen F. Marshall, Samuel E. Garfinkle +14 more

Solution mapping of MHC-I:TCR interactions using a minimalistic protein system

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2506016122

N/A

0.241DataRank · unranked

4 citations

Apala Chaudhuri, Xiaojing Chen, William L. White, K. Christopher García, David Baker +2 more

Regulating IL-2 Immune Signaling Function Via A Core Allosteric Structural Network

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168892

N/A

0.104DataRank · unranked

1 citations

Shahlo Solieva, Daniel Hwang, Viviane S. De Paula, Charina Fabilane, Michael C. Young +7 more

A slow-exchange conformational switch regulates off-target cleavage by high-fidelity Cas9

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.06.413757

N/A

0DataRank · unranked

3 citations

Abhinav Dubey, Haribabu Arthanari, Nikolaos G. Sgourakis, Viviane S. De Paula

TAPBPR Promotes Antigen Loading on MHC-I Molecules Using a Peptide Trap

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.24.059634

N/A

0DataRank · unranked

2 citations

Christine A. Devlin, Giora I. Morozov, Sarah A. Overall, Danai Moschidi, Neha M. Akella +3 more

RETRACTED ARTICLE: Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs

Nature(2021)10.1038/s41586-021-04061-6

N/A

0DataRank · unranked

101 citations

Quinlen F. Marshall, John M. Warrington, Rasika Premaratne, Alvin Farrel, David Groff +23 more

TAPBPR promotes antigen loading on MHC-I molecules using a peptide trap

Nature Communications(2021)10.1038/s41467-021-23225-6

N/A

0DataRank · unranked

57 citations

Christine A. Devlin, Giora I. Morozov, Sarah A. Overall, Danai Moschidi, Neha M. Akella +3 more

Dynamics of MHC-I molecules in the antigen processing and presentation pathway

Current Opinion in Immunology(2021)10.1016/j.coi.2021.04.012

N/A

0DataRank · unranked

51 citations

Nikolaos G. Sgourakis, Hau V. Truong

Backbone-independent NMR resonance assignments of methyl probes in large proteins

Nature Communications(2021)10.1038/s41467-021-20984-0

N/A

0DataRank · unranked

50 citations

Viviane S. De Paula, Andrew C. McShan, Nikolaos G. Sgourakis, Santrupti Nerli

Global Dynamics as Communication Sensors in Peptide Synthetase Cyclization Domains

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.06.461881

N/A

0DataRank · unranked

3 citations

Aswani K. Kancherla, Kenneth A. Marincin, Guillaume Bouvignies, Santrupti Nerli, Nikolaos G. Sgourakis +3 more

Structural mechanism of tapasin-mediated MHC-I peptide loading in antigen presentation

Nature Communications(2022)10.1038/s41467-022-33153-8

N/A

0DataRank · unranked

50 citations

Daniel K. Taylor, Ellen J. Kim, Lisa F. Boyd, Javeed Ahmad, Michael G. Mage +7 more

Enzymatic processing and MHC loading 3Molecular mechanisms of chaperone-mediated MHC-I peptide loading

Molecular Immunology(2022)10.1016/j.molimm.2022.05.019

N/A

0DataRank · unranked

0 citations

Jiansheng Jiang, Kannan Natarajan, Lisa F. Boyd, Michael G. Mage, Ellen Kim +4 more

Targeting of intracellular oncoproteins with peptide-centric CARs

Nature(2023)10.1038/s41586-023-06706-0

N/A

0DataRank · unranked

79 citations

Quinlen F. Marshall, John M. Warrington, Rasika Premaratne, Alvin Farrel, David Groff +23 more

Universal open MHC-I molecules for rapid peptide loading and enhanced complex stability across HLA allotypes

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2304055120

N/A

0DataRank · unranked

37 citations

Michael C. Young, Claire H. Woodward, Julia N. Danon, Hau V. Truong, S. K. Gupta +5 more

Universal open MHC-I molecules for rapid peptide loading and enhanced complex stability across HLA allotypes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.18.533266

N/A

0DataRank · unranked

3 citations

Michael C. Young, Claire H. Woodward, Julia N. Danon, Hau V. Truong, S. K. Gupta +4 more

Structural principles of peptide-centric Chimeric Antigen Receptor recognition guide therapeutic expansion

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.542108

N/A

0DataRank · unranked

1 citations

Tyler J. Florio, S. K. Gupta, Michael C. Young, Quinlen F. Marshall, Samuel E. Garfinkle +14 more

Targeting peptide antigens using a multiallelic MHC I-binding system

Nature Biotechnology(2024)10.1038/s41587-024-02505-8

N/A

0DataRank · unranked

26 citations

Leena Mallik, Daniel Hwang, Yi Sun, Chengzi I. Kaku, Daniel Hoces +24 more

Dynamic sampling of a surveillance state enables DNA proofreading by Cas9

Cell chemical biology(2024)10.1016/j.chembiol.2024.10.001

N/A

0DataRank · unranked

8 citations

Abhinav Dubey, Haribabu Arthanari, Nikolaos G. Sgourakis, Viviane S. De Paula

Atomically accurate de novo design of antibodies with RFdiffusion

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.14.585103

N/A

0DataRank · unranked

191 citations

Joseph L. Watson, Robert J. Ragotte, Andrew J. Borst, DéJenaé L. See, Connor Weidle +27 more

CryoEM structure of an MHC-I/TAPBPR peptide-bound intermediate reveals the mechanism of antigen proofreading

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2416992122

N/A

0DataRank · unranked

9 citations

Ruth A. Pumroy, Leena Mallik, Apala Chaudhuri, Chloe Wang, Daniel Hwang +5 more

A structure-guided approach to predict MHC-I restriction of T cell receptors for public antigens

Structure(2025)10.1016/j.str.2025.06.011

N/A

0DataRank · unranked

3 citations

Nikolaos G. Sgourakis, S. K. Gupta

High throughput pMHC-I tetramer library production using chaperone-mediated peptide exchange

Nature Communications(2020)10.1038/s41467-020-15710-1

N/A

0DataRank · unranked

65 citations

Jugmohit Toor, Stephanie Hao, Mark Yarmarkovich, Sara M. O’Rourke, Giora I. Morozov +9 more

Structural mechanism of anti-MHC-I antibody blocking of inhibitory NK cell receptors in tumor immunity

Research Square(2025)10.21203/rs.3.rs-7133881/v1

N/A

0DataRank · unranked

0 citations

Jiansheng Jiang, Abir K. Panda, Kannan Natarajan, Haotian Lei, Shikha Sharma +12 more

Structure-Based Modeling of SARS-CoV-2 Peptide/HLA-A02 Antigens

Frontiers in Medical Technology(2020)10.3389/fmedt.2020.553478

N/A

0DataRank · unranked

22 citations

Nikolaos G. Sgourakis, Santrupti Nerli

Interleukin-2 druggability is modulated by global conformational transitions controlled by a helical capping switch

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2000419117

N/A

0DataRank · unranked

29 citations

Kevin M. Jude, Santrupti Nerli, Caleb R. Glassman, K. Christopher García, Nikolaos G. Sgourakis +1 more

Nearest-neighbor NMR spectroscopy: categorizing spectral peaks by their adjacent nuclei

Nature Communications(2020)10.1038/s41467-020-19325-4

N/A

0DataRank · unranked

18 citations

Abhinav Dubey, Wan-Na Chen, Viviane S. De Paula, Meng Zhang, Nikolaos G. Sgourakis +5 more

Structure-based modeling of SARS-CoV-2 peptide/HLA-A02 antigens

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.23.004176

N/A

0DataRank · unranked

14 citations

Nikolaos G. Sgourakis, Santrupti Nerli