🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jue Ruan

Agricultural Genomics Institute at Shenzhen

ORCID: 0000-0003-3713-3192

Also affiliated with Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
32.7Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The diploid genome sequence of an Asian individual

Nature(2008)10.1038/nature07484
Top 1%
14.7DataRank
Top 1%964 citations

Wei Wang, Alexandra P. Lewis, Alan Hodgkinson, Geng Tian, Laurie Goodman +75 more

Papers

Driven by 9 papers — median percentile 98. Top paper: “The diploid genome sequence of an Asian individual”.

The diploid genome sequence of an Asian individual

Nature(2008)10.1038/nature07484
Top 1%
14.7DataRank
Top 1%964 citations

Wei Wang, Alexandra P. Lewis, Alan Hodgkinson, Geng Tian, Laurie Goodman +75 more

TreeFam: 2008 Update

Nucleic Acids Research(2007)10.1093/nar/gkm1005
Top 2%
9.1DataRank
Top 2%347 citations

Z. Chen, A. Coghlan, P. Gartung, Y. Hu, R. Li +22 more

A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms

Nature(2004)10.1038/nature03156
Top 2%
8.1DataRank
Top 2%456 citations

Gane Ka‐Shu Wong, Bin Liu, Jun Wang, Yong Zhang, Xu Yang +105 more

The Sequence Alignment/Map format and SAMtools

Bioinformatics(2009)10.1093/bioinformatics/btp352
N/A
1.7DataRank · unranked
66179 citations

Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Richard Durbin +5 more

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

Nature Biotechnology(2019)10.1038/s41587-019-0217-9
N/A
1.1DataRank · unranked
1912 citations

Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard J. Hall, Gregory T. Concepcion +24 more

Fast and accurate long-read assembly with wtdbg2

Nature Methods(2019)10.1038/s41592-019-0669-3
N/A
1.1DataRank · unranked
1561 citations

Alexandra P. Lewis, Jue Ruan

Automated assembly of high-quality diploid human reference genomes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.06.483034
Top 28%
0.719DataRank
Top 28%22 citations

Giulio Formenti, Arang Rhie, Andrea Guarracino, Chentao Yang, Jonathan M. D. Wood +77 more

Fast and accurate long-read assembly with wtdbg2

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/530972
N/A
0.680DataRank · unranked
92 citations

Alexandra P. Lewis, Jue Ruan

Assemblies evaluated in the wtdbg2 paper

Zenodo (CERN European Organization for Nuclear Research)(2021)10.5281/zenodo.4419950
N/A
0DataRank · unranked
0 citations

Alexandra P. Lewis, Jue Ruan