🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Pengfei Dong

Allen Institute for Brain Science

ORCID: 0000-0003-3735-5158

Also affiliated with Icahn School of Medicine at Mount Sinai

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.5Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease

Nature Neuroscience(2022)10.1038/s41593-022-01166-7
Top 17%
1.2DataRank
Top 17%65 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +17 more

Papers

Driven by 20 papers — median percentile 59. Top paper: “Genetics of the human microglia regulome refines Alzheimer’s disease risk loci”.

Genetics of the human microglia regulome refines Alzheimer’s disease risk loci

Nature Genetics(2022)10.1038/s41588-022-01149-1
N/A
2.8DataRank · unranked
172 citations

John F. Fullard, Biao Zeng, Jaroslav Bendl, Pengfei Dong, Samir Rahman +14 more

The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease

Nature Neuroscience(2022)10.1038/s41593-022-01166-7
Top 17%
1.2DataRank
Top 17%65 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +17 more

Population-level variation in enhancer expression identifies disease mechanisms in the human brain

Nature Genetics(2022)10.1038/s41588-022-01170-4
N/A
1.1DataRank · unranked
53 citations

Gabriel E. Hoffman, Pasha Apontes, Jaroslav Bendl, Samir Rahman, Michael B. Fernando +48 more

Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome

Nucleic Acids Research(2023)10.1093/nar/gkad798
Top 27%
0.756DataRank
Top 27%28 citations

Pengfei Dong, Pasha Apontes, Michael B. Fernando, Roman Kosoy, Kayla G. Townsley +10 more

Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains

Nature Neuroscience(2022)10.1038/s41593-022-01032-6
N/A
0.644DataRank · unranked
72 citations

Gabriel E. Hoffman, Jaroslav Bendl, Samir Rahman, Pengfei Dong, Will Liao +30 more

Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism

Nature Genetics(2023)10.1038/s41588-023-01464-1
N/A
0.550DataRank · unranked
38 citations

Trevor C Griffen, Karen Therrien, Jaroslav Bendl, Sanan Venkatesh, Pengfei Dong +9 more

Genetics of the human microglia regulome refines Alzheimer’s disease risk loci

medRxiv(2021)10.1101/2021.10.17.21264910
N/A
0.416DataRank · unranked
15 citations

John F. Fullard, Biao Zeng, Jaroslav Bendl, Pengfei Dong, Samir Rahman +13 more

The three-dimensional landscape of chromatin accessibility in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426303
N/A
0.396DataRank · unranked
13 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +14 more

The Neuroepigenome: Implications of Chemical and Physical Modifications of Genomic DNA in Schizophrenia

Biological Psychiatry(2022)10.1016/j.biopsych.2022.04.018
N/A
0.360DataRank · unranked
10 citations

Samir Rahman, Pengfei Dong, John F. Fullard, Panos Roussos, Kiran Girdhar

Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers

Molecular Psychiatry(2023)10.1038/s41380-023-02370-y
N/A
0.312DataRank · unranked
7 citations

Georgios Voloudakis, John F. Fullard, Gabriel E. Hoffman, Panos Roussos, Pengfei Dong

From compartments to gene loops: Functions of the 3D genome in the human brain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.12.464094
N/A
0.308DataRank · unranked
6 citations

Pengfei Dong, Pasha Apontes, Michael B. Fernando, Kayla G. Townsley, Kiran Girdhar +9 more

A multi-regional human brain atlas of chromatin accessibility and gene expression facilitates promoter-isoform resolution genetic fine-mapping

Nature Communications(2024)10.1038/s41467-024-54448-y
Top 55%
0.302DataRank
Top 55%6 citations

Liting Song, Jaroslav Bendl, Ruth Misir, Zhiping Shao, Jonathan Edelstien +9 more

The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development

medRxiv(2023)10.1101/2023.10.02.23296067
N/A
0.292DataRank · unranked
6 citations

Jaroslav Bendl, Andrew Baumgartner, Karen Therrien, Sanan Venkatesh, Deepika Mathur +15 more

Chromatin accessibility provides a window into the genetic etiology of human brain disease

Trends in Genetics(2025)10.1016/j.tig.2025.01.001
N/A
0.292DataRank · unranked
6 citations

John F. Fullard, Kiran Girdhar, Pengfei Dong, Roman Kosoy, Biao Zeng +3 more

Population-level variation of enhancer expression identifies novel disease mechanisms in the human brain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.14.443421
N/A
0.269DataRank · unranked
5 citations

Gabriel E. Hoffman, Pasha Apontes, Jaroslav Bendl, Samir Rahman, Michael B. Fernando +12 more

Transcriptome and chromatin accessibility landscapes across 25 distinct human brain regions expand the susceptibility gene set for neuropsychiatric disorders

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.02.506419
Top 59%
0.261DataRank
Top 59%4 citations

Jaroslav Bendl, Ruth Misir, Zhiping Shao, Jonathan Edelstien, David A. Davis +8 more

The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development

Research Square(2023)10.21203/rs.3.rs-3393581/v1
N/A
0.241DataRank · unranked
4 citations

Jaroslav Bendl, Andrew Baumgartner, Karen Therrien, Sanan Venkatesh, Deepika Mathur +15 more

Acetylated Chromatin Domains Link Chromosomal Organization to Cell- and Circuit-level Dysfunction in Schizophrenia and Bipolar Disorder

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.02.446728
N/A
0.165DataRank · unranked
2 citations

Gabriel E. Hoffman, Jaroslav Bendl, Samir Rahman, Pengfei Dong, Will Liao +28 more

miR155 triplicated in Down syndrome regulates hippocampal GABAergic neurogenesis in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.28.679053
N/A
0DataRank · unranked
0 citations

Jean‐Vianney Haure‐Mirande, Mesude Bicak, Pengfei Dong, Ilya Kruglikov, Aisha Al-subaie +5 more

From compartments to gene loops: Functions of the 3D genome in the human brain

Research Square(2021)10.21203/rs.3.rs-964634/v1
N/A
0DataRank · unranked
0 citations

Samir Rahman, Pengfei Dong, Pasha Apontes, Michael B. Fernando, Kayla G. Townsley +9 more