Fresia Pareja

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Data from Morphologic and Genomic Characteristics of Breast Cancers Occurring in Individuals with Lynch Syndrome

(2023)10.1158/1078-0432.c.6530810

Top 100%

0DataRank

Top 100%0 citations

Edaise M. da Silva, Antonio Marra, Andrea Gazzo, Pier Selenica, K. Vikas +16 more

Papers

Driven by 65 papers — median percentile 0. Top paper: “TERT promoter hotspot mutations and gene amplification in metaplastic breast cancer”.

TERT promoter hotspot mutations and gene amplification in metaplastic breast cancer

npj Breast Cancer(2021)10.1038/s41523-021-00250-8

N/A

1.1DataRank · unranked

31 citations

Pier Selenica, Mahsa Vahdatinia, Fresia Pareja, Arnaud Da Cruz Paula, Lorenzo Ferrando +14 more

Ovarian cancer mutational processes drive site-specific immune evasion

Nature(2022)10.1038/s41586-022-05496-1

N/A

0.863DataRank · unranked

314 citations

Florian Uhlitz, Nicholas Ceglia, Jamie Lim, Michelle Wu, Neeman Mohibullah +56 more

Identification of recurrent FHL2-GLI2 oncogenic fusion in sclerosing stromal tumors of the ovary

Nature Communications(2020)10.1038/s41467-019-13806-x

N/A

0.631DataRank · unranked

66 citations

Arnaud Da Cruz Paula, Thais Basili, Higinio Dopeso, Rui Bi, Fresia Pareja +23 more

Genomic profiling of primary and recurrent adult granulosa cell tumors of the ovary

Modern Pathology(2020)10.1038/s41379-020-0514-3

N/A

0.628DataRank · unranked

65 citations

Edaise M. da Silva, Sheila Segura, Fresia Pareja, Rui Bi, Pier Selenica +14 more

Comprehensive assessment of germline pathogenic variant detection in tumor-only sequencing

Annals of Oncology(2022)10.1016/j.annonc.2022.01.006

N/A

0.604DataRank · unranked

55 citations

Fresia Pareja, David N. Brown, Ozge Ceyhan‐Birsoy, Maksym Misyura, Satshil Rana +16 more

Cancer-Causative Mutations Occurring in Early Embryogenesis

Cancer Discovery(2021)10.1158/2159-8290.cd-21-1110

N/A

0.542DataRank · unranked

36 citations

Ryan Ptashkin, David N. Brown, Fatemeh Derakhshan, Pier Selenica, Edaise M. da Silva +31 more

Morphologic and Genomic Characteristics of Breast Cancers Occurring in Individuals with Lynch Syndrome

Clinical Cancer Research(2021)10.1158/1078-0432.ccr-21-2027

N/A

0.520DataRank · unranked

31 citations

Edaise M. da Silva, Antonio Marra, Andrea M. Gazzo, Pier Selenica, Vikas K. Rai +16 more

Invasive lobular carcinoma: Strategies and perspectives from the lobular breast cancer research group

Cancer Treatment Reviews(2025)10.1016/j.ctrv.2025.103001

N/A

0.406DataRank · unranked

14 citations

Sherry Shen, Carmen Criscitiello, Rita A. Mukhtar, Lauren A. Gamble, Elena Guerini‐Rocco +20 more

eIF4A controls translation of estrogen receptor alpha and is a therapeutic target in advanced breast cancer

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2424286122

N/A

0.382DataRank · unranked

9 citations

Ezra Y. Rosen, Malvika Sharma, M. Dorso, Nicholas Mai, Corina Amor +22 more

Genetic interactions among Brca1, Brca2, Palb2, and Trp53 in mammary tumor development

npj Breast Cancer(2021)10.1038/s41523-021-00253-5

N/A

0.360DataRank · unranked

10 citations

Pier Selenica, Amar Mahdi, Fresia Pareja, Kelly Kyker‐Snowman, Ying Chen +14 more

RB1 Genetic Alterations in Estrogen Receptor–Positive Breast Carcinomas: Correlation With Neuroendocrine Differentiation

Modern Pathology(2024)10.1016/j.modpat.2024.100541

N/A

0.360DataRank · unranked

10 citations

Antonio Marra, Pier Selenica, Andrea Gazzo, Kiki Tan, Dara S. Ross +8 more

Recurrent WWTR1S89W mutations and Hippo pathway deregulation in clear cell carcinomas of the cervix

The Journal of Pathology(2022)10.1002/path.5910

N/A

0.360DataRank · unranked

10 citations

Thais Basili, Higinio Dopeso, Arnaud Da Cruz Paula, Rui Bi, Shirin Issa Bhaloo +23 more

Whole‐exome sequencing analysis of juvenile papillomatosis and coexisting breast carcinoma

The Journal of Pathology Clinical Research(2020)10.1002/cjp2.190

N/A

0.330DataRank · unranked

8 citations

Fresia Pareja, Arnaud Da Cruz Paula, Mahsa Vahdatinia, Andrea Gazzo, Lorenzo Ferrando +11 more

The spatially informed mFISHseq assay resolves biomarker discordance and predicts treatment response in breast cancer

Nature Communications(2025)10.1038/s41467-024-55583-2

N/A

0.330DataRank · unranked

8 citations

Barbora Huraiová, Natália Valková, Natália Matyašovská, Daniela Gábrišová, Soňa Gubová +23 more

KIT genetic alterations in breast cancer

Journal of Clinical Pathology(2022)10.1136/jcp-2022-208611

N/A

0.312DataRank · unranked

7 citations

Fatemeh Derakhshan, Arnaud Da Cruz Paula, Higinio Dopeso, Antonio Marra, Andrea Gazzo +11 more

HER2 persistence after treatment with T-DXd in breast and gastrointestinal cancers.

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.1052

N/A

0.292DataRank · unranked

6 citations

Fresia Pareja, Komal Jhaveri, Elaine M. Walsh, Geoffrey Y. Ku, Steven B. Maron +7 more

Frank Invasion in Tall Cell Carcinoma With Reversed Polarity of the Breast: Report of Two Cases

Modern Pathology(2025)10.1016/j.modpat.2025.100714

N/A

0.241DataRank · unranked

4 citations

Fresia Pareja, Dara S. Ross, Anne Grabenstetter, Hannah Y. Wen, Edi Brogi +1 more

Genomic characterization of tumor mutational burden-high breast carcinomas

npj Precision Oncology(2025)10.1038/s41698-025-01045-x

N/A

0.208DataRank · unranked

3 citations

Chad Vanderbilt, Satshil Rana, Abhinita Mohanty, Fresia Pareja, Edi Brogi +6 more

Predictors of response to neoadjuvant chemo-immunotherapy in metaplastic triple-negative breast cancer

npj Breast Cancer(2025)10.1038/s41523-025-00816-w

N/A

0.208DataRank · unranked

3 citations

Fresia Pareja, Charlie White, Yuan Chen, Hannah Y. Wen, Esra Dikoglu +11 more

Evolution and Co-occurrence of PI3K Pathway Gene Mutations in Endometrial Carcinoma Molecular Subtypes at the Single-Cell Level

Clinical Cancer Research(2025)10.1158/1078-0432.ccr-25-1237

N/A

0.165DataRank · unranked

2 citations

Yingjie Zhu, David N. Brown, Shirin Issa Bhaloo, Fresia Pareja, Timothy Hoang +11 more

Genomic landscape of breast cancer in elderly patients

npj Breast Cancer(2025)10.1038/s41523-025-00781-4

N/A

0.165DataRank · unranked

2 citations

Higinio Dopeso, Matteo Repetto, Thais Basili, Andrea Gazzo, Christopher J. Schwartz +16 more

eIF4A controls translation of estrogen receptor alpha and is a therapeutic target in advanced breast cancer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.08.593195

N/A

0.165DataRank · unranked

2 citations

Malvika Sharma, M. Dorso, Nicholas Mai, Corina Amor, Jason Reiter +21 more

Lung Carcinoma Metastatic to the Breast: A Comprehensive Analysis of Clinical Presentation, Morphologic, and Molecular Features, With Emphasis on Diagnostic Pitfalls

Modern Pathology(2025)10.1016/j.modpat.2025.100936

N/A

0.104DataRank · unranked

1 citations

Theodore Vougiouklakis, Andrea Gazzo, Hannah Y. Wen, Dara S. Ross, Fresia Pareja +2 more

Hyperthermic intraperitoneal chemotherapy (HIPEC) with carboplatin induces distinct transcriptomic changes in ovarian tumor and normal tissues

Gynecologic Oncology(2022)10.1016/j.ygyno.2022.02.022

N/A

0DataRank · unranked

15 citations

Lorenzo Ferrando, Higinio Dopeso, Anthe A. Stylianou, Thais Basili, Fresia Pareja +14 more

The clinical behavior and genomic features of the so-called adenoid cystic carcinomas of the solid variant with basaloid features

Modern Pathology(2021)10.1038/s41379-021-00931-6

N/A

0DataRank · unranked

47 citations

Edi Brogi, Antonio Marra, Arnaud Da Cruz Paula, Gouri J. Nanjangud, Edaise M. da Silva +11 more

Granular cell tumor of thyroid: a case series with molecular characterization highlighting unique pitfalls

Endocrine(2022)10.1007/s12020-022-03006-x

N/A

0DataRank · unranked

7 citations

Arnaud Da Cruz Paula, Britta Weigelt, Fresia Pareja, Jorge S. Reis‐Filho, Linwah Yip +3 more

Problematic breast tumors reassessed in light of novel molecular data

Modern Pathology(2020)10.1038/s41379-020-00693-7

N/A

0DataRank · unranked

37 citations

Britta Weigelt, Jorge S. Reis‐Filho, Fresia Pareja

Genomic Profiling Reveals Germline Predisposition and Homologous Recombination Deficiency in Pancreatic Acinar Cell Carcinoma

Journal of Clinical Oncology(2023)10.1200/jco.23.00561

N/A

0DataRank · unranked

44 citations

Antonio Marra, Binbin Zheng-Lin, Pier Selenica, Juan Blanco-Heredia, Yingjie Zhu +30 more

NR4A3 Expression Is Consistently Absent in Acinic Cell Carcinomas of the Breast: A Potential Nosologic Shift

Modern Pathology(2023)10.1016/j.modpat.2023.100144

N/A

0DataRank · unranked

24 citations

Pier Selenica, Fresia Pareja, Paola dal Cin, Etta Hanlon, Britta Weigelt +5 more

Clinicopathologic and genomic features of lobular like invasive mammary carcinoma: is it a distinct entity?

npj Breast Cancer(2023)10.1038/s41523-023-00566-7

N/A

0DataRank · unranked

16 citations

Edaise M. da Silva, Hae‐Sun La, Beth Z. Clark, Jeffrey L. Fine, Gloria J Carter +16 more

Nonlobular Invasive Breast Carcinomas with Biallelic Pathogenic CDH1 Somatic Alterations: A Histologic, Immunophenotypic, and Genomic Characterization

Modern Pathology(2023)10.1016/j.modpat.2023.100375

N/A

0DataRank · unranked

5 citations

Arnaud Da Cruz Paula, Pier Selenica, Edaise M. da Silva, Anne Grabenstetter, Sahar Jalali +15 more

The genetic landscape of metaplastic breast cancers and uterine carcinosarcomas

Molecular Oncology(2020)10.1002/1878-0261.12813

N/A

0DataRank · unranked

40 citations

Lorenzo Ferrando, Arnaud Da Cruz Paula, David N. Brown, Felipe C. Geyer, Fresia Pareja +14 more

Multiplexed RNA-FISH-guided Laser Capture Microdissection RNA Sequencing Improves Breast Cancer Molecular Subtyping, Prognostic Classification, and Predicts Response to Antibody Drug Conjugates

medRxiv(2023)10.1101/2023.12.05.23299341

N/A

0DataRank · unranked

3 citations

Barbora Huraiová, Natália Valková, Natália Birknerová, Daniela Gábrišová, Soňa Gubová +20 more

Data from Morphologic and Genomic Characteristics of Breast Cancers Occurring in Individuals with Lynch Syndrome

(2023)10.1158/1078-0432.c.6530810

Top 100%

0DataRank

Top 100%0 citations

Edaise M. da Silva, Antonio Marra, Andrea Gazzo, Pier Selenica, K. Vikas +16 more

2328P Alternative molecular mechanisms underpinning breast invasive lobular carcinoma identified by genomics-driven artificial intelligence model

Annals of Oncology(2023)10.1016/j.annonc.2023.09.1357

N/A

0DataRank · unranked

0 citations

Higinio Dopeso, Yukai Wang, Andrea Gazzo, David N. Brown, Pier Selenica +15 more

Genomic and epigenomic basis of breast invasive lobular carcinomas lacking CDH1 genetic alterations

npj Precision Oncology(2024)10.1038/s41698-024-00508-x

N/A

0DataRank · unranked

27 citations

Andrea Gazzo, Fatemeh Derakhshan, David N. Brown, Pier Selenica, Sahar Jalali +21 more

A Genomics-Driven Artificial Intelligence – Based Model Classifies Breast Invasive Lobular Carcinoma and Discovers CDH1 Inactivating Mechanisms

Cancer Research(2024)10.1158/0008-5472.can-24-1322

N/A

0DataRank · unranked

20 citations

Higinio Dopeso, Yi Kan Wang, Andrea Gazzo, David N. Brown, Monami Banerjee +34 more

Genotype-Directed Synthetic Cytotoxicity of ATR Inhibition with Radiotherapy

Clinical Cancer Research(2024)10.1158/1078-0432.ccr-24-0154

N/A

0DataRank · unranked

9 citations

S. K. Sinha, Ardijana Novaj, Jennifer Ma, Niamh McDermott, Xin Pei +16 more

Converging and evolving immuno-genomic routes toward immune escape in breast cancer

Nature Communications(2024)10.1038/s41467-024-45292-1

N/A

0DataRank · unranked

17 citations

Carla Anjos Souza, Juan L. Trincado, María González‐Cao, Samuel Gonçalves-Ribeiro, Sara Ruiz Gil +18 more

Spatial molecular profiling of mixed invasive ductal and lobular breast cancers reveals heterogeneity in intrinsic molecular subtypes, oncogenic signatures, and mutations

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2322068121

N/A

0DataRank · unranked

16 citations

Azadeh Nasrazadani, Julia Foldi, Jennifer M. Atkinson, Celina G. Kleer, Priscilla F. McAuliffe +14 more

Pleomorphic adenomas and mucoepidermoid carcinomas of the breast are underpinned by fusion genes

npj Breast Cancer(2020)10.1038/s41523-020-0164-0

N/A

0DataRank · unranked

42 citations

Arnaud Da Cruz Paula, Rodrigo Gularte‐Mérida, Mahsa Vahdatinia, Anqi Li, Felipe C. Geyer +9 more

Adenoid cystic carcinoma of the Bartholin's gland is underpinned by MYB- and MYBL1- rearrangements

Gynecologic Oncology(2024)10.1016/j.ygyno.2024.02.015

N/A

0DataRank · unranked

5 citations

Arnaud Da Cruz Paula, Edaise M. da Silva, Fresia Pareja, Juber Patel, Yingjie Zhu +7 more

Molecular profiling of primary endometrioid endometrial cancer and matched lung metastases: CTNNB1 mutation as a potential driver

Gynecologic Oncology Reports(2024)10.1016/j.gore.2024.101391

N/A

0DataRank · unranked

2 citations

Arnaud Da Cruz Paula, Elizabeth Kertowidjojo, Fresia Pareja, Kimberly Dessources, Edaise M. da Silva +6 more

Molecular Pathology of Breast Tumors

Clinics in Laboratory Medicine(2024)10.1016/j.cll.2023.08.001

N/A

0DataRank · unranked

1 citations

Fresia Pareja, Dara S. Ross

36P Multiplexed RNA-FISH-guided laser capture microdissection RNA sequencing improves breast cancer molecular subtyping and prognostic classification

ESMO Open(2024)10.1016/j.esmoop.2024.103044

N/A

0DataRank · unranked

0 citations

Barbora Huraiová, Natália Valková, Natália Matyašovská, Daniela Gábrišová, Soňa Gubová +12 more

Semi-automated analysis of HER2 immunohistochemistry in invasive breast carcinoma using whole slide images: utility for interpretation in clinical practice

Pathology & Oncology Research(2024)10.3389/pore.2024.1611826

N/A

0DataRank · unranked

0 citations

Nilay Bakoglu, Emine Cesmecioglu, Matthew G Hanna, Fresia Pareja, Hannah Y. Wen +5 more

Trastuzumab Deruxtecan Resistance via Loss of HER2 Expression and Binding

Cancer Discovery(2025)10.1158/2159-8290.cd-25-0647

N/A

0DataRank · unranked

21 citations

Avantika Gupta, Nicholas Mai, Sharanya Nag, Joshua Lau, Sukrit Singh +12 more

Oncogenic properties and signaling basis of the PAX8‐GLIS3 fusion gene

International Journal of Cancer(2020)10.1002/ijc.33040

N/A

0DataRank · unranked

13 citations

Higinio Dopeso, Sarah H. Kim, Lorenzo Ferrando, Fresia Pareja, Arnaud Da Cruz Paula +11 more

Unraveling complexity and leveraging opportunities in uncommon breast cancer subtypes

npj Breast Cancer(2025)10.1038/s41523-025-00719-w

N/A

0DataRank · unranked

12 citations

Rohit Bhargava, Virginia F. Borges, Edi Brogi, Rita Canas‐Marques, Fátima Cardoso +23 more

RNA transcripts serve as a template for double-strand break repair in human cells

Nature Communications(2025)10.1038/s41467-025-59510-x

N/A

0DataRank · unranked

9 citations

Alessandra Brambati, Hina Shah, Niamh McDermott, Juber Patel, Yingjie Zhu +21 more

Stromal MED12 exon 2 mutations in complex fibroadenomas of the breast

Journal of Clinical Pathology(2020)10.1136/jclinpath-2020-207062

N/A

0DataRank · unranked

10 citations

Francisco Beça, Ana Paula Martins Sebastião, Melissa P. Murray, Catarina Silveira, Arnaud Da Cruz Paula +9 more

The genomic landscape of metastatic histologic special types of invasive breast cancer

npj Breast Cancer(2020)10.1038/s41523-020-00195-4

N/A

0DataRank · unranked

48 citations

Lorenzo Ferrando, Simon Lee, Francisco Beça, Pier Selenica, David N. Brown +13 more

Immunohistochemical analysis of IDH2 R172 hotspot mutations in breast papillary neoplasms: applications in the diagnosis of tall cell carcinoma with reverse polarity

Modern Pathology(2020)10.1038/s41379-019-0442-2

N/A

0DataRank · unranked

60 citations

Edaise M. da Silva, Denise Frosina, Felipe C. Geyer, John R. Lozada, Thais Basili +21 more

Breast carcinomas associated with microglandular adenosis are linked to germline alterations in homologous recombination-deficiency genes

npj Breast Cancer(2025)10.1038/s41523-025-00794-z

N/A

0DataRank · unranked

4 citations

Iskender Genco, Matteo Repetto, Daniel M. Muldoon, Andrea Gazzo, Panieh Terraf +11 more

Whole-Exome Sequencing Analysis of the Progression from Non–Low-Grade Ductal Carcinoma In Situ to Invasive Ductal Carcinoma

Clinical Cancer Research(2020)10.1158/1078-0432.ccr-19-2563

N/A

0DataRank · unranked

87 citations

David N. Brown, Ju Youn Lee, Arnaud Da Cruz Paula, Pier Selenica, Rui Bi +11 more

Human Epidermal Growth Factor Receptor 2 (HER2)-Ultralow Breast Cancer: Incidence, Clinicopathologic Features, and Need for Refined Scoring System

Modern Pathology(2025)10.1016/j.modpat.2025.100901

N/A

0DataRank · unranked

2 citations

Edi Brogi, Christopher J. Schwartz, Fresia Pareja, Hannah Y. Wen, Dara S. Ross +1 more

Case Report: Lasting complete response to pembrolizumab in mismatch repair-deficient cardiac sarcoma: a genomic characterization

Frontiers in Oncology(2025)10.3389/fonc.2025.1485386

N/A

0DataRank · unranked

1 citations

Bettina Bisig, David C. Rotzinger, Fresia Pareja, Edoardo Missiaglia, Ioannis A Voutsadakis +3 more

Biological correlates associated with high-risk breast cancer patients identified using a computational method

npj Breast Cancer(2025)10.1038/s41523-025-00725-y

N/A

0DataRank · unranked

1 citations

Fresia Pareja, Rena Elkin, Kaiming Xu, Larry Norton, Joseph O. Deasy +1 more

Peritoneal washings analysis in endometrial cancer: Comparison of somatic mutation detection with panel sequencing and traditional cytology

Gynecologic Oncology(2025)10.1016/j.ygyno.2025.05.002

N/A

0DataRank · unranked

0 citations

Pier Selenica, Kimberly Dessources, Arnaud Da Cruz Paula, Sushmita Gordhandas, Michelle Wu +7 more

Breast carcinomas associated with microglandular adenosis are linked to germline alterations in homologous recombination-deficiency genes

Research Square(2025)10.21203/rs.3.rs-6680831/v1

N/A

0DataRank · unranked

0 citations

Iskender Genco, Matteo Repetto, Daniel M. Muldoon, Andrea Gazzo, Panieh Terraf +11 more

Molecular characterization of high-grade serous ovarian cancers occurring in younger and older women

Gynecologic Oncology(2021)10.1016/j.ygyno.2021.02.028

N/A

0DataRank · unranked

13 citations

Pier Selenica, Fresia Pareja, Mahsa Vahdatinia, Yingjie Zhu, Xin Pei +9 more

ERα-LBD, a novel isoform of estrogen receptor alpha, promotes breast cancer proliferation and endocrine resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.14.464262

N/A

0DataRank · unranked

0 citations

Pasquale Sansone, Vinagolu K. Rajasekhar, Mesruh Turkekul, Vitaly Boyko, Fanli Meng +19 more

Molecular Pathology of Breast Tumors

Surgical pathology clinics(2021)10.1016/j.path.2021.05.009

N/A

0DataRank · unranked

10 citations

Fresia Pareja, Dara S. Ross

ERα-LBD, an isoform of estrogen receptor alpha, promotes breast cancer proliferation and endocrine resistance

npj Breast Cancer(2022)10.1038/s41523-022-00470-6

N/A

0DataRank · unranked

25 citations

Pasquale Sansone, Vinagolu K. Rajasekhar, Mesruh Turkekul, Vitaly Boyko, Fanli Meng +21 more

Expression of novel neuroendocrine markers in breast carcinomas: a study of INSM1, ASCL1, and POU2F3

Human Pathology(2022)10.1016/j.humpath.2022.06.003

N/A

0DataRank · unranked

16 citations

Fresia Pareja, Matthew G. Hanna, Achim A. Jungbluth, Natasha Rekhtman, Edi Brogi +1 more

Fresia Pareja

Indexed papers

Top data-sharing exemplar

Papers