🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Siddhartha Thakur

North Carolina State University

ORCID: 0000-0003-3787-9939
Agricultural and Biological SciencesBiochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Genomic Screening of Antimicrobial Resistance Markers in UK and US Campylobacter Isolates Highlights Stability of Resistance over an 18-Year Period”.

Genomic Screening of Antimicrobial Resistance Markers in UK and US Campylobacter Isolates Highlights Stability of Resistance over an 18-Year Period

Antimicrobial Agents and Chemotherapy(2022)10.1128/aac.01687-21
N/A
1.1DataRank · unranked
24 citations

Siddhartha Thakur, Joaquín M. Prada, Jai W. Mehat, Roberto M. La Ragione, Arnoud H. M. van Vliet

Ultra-accurate microbial amplicon sequencing with synthetic long reads

Microbiome(2021)10.1186/s40168-021-01072-3
N/A
0.736DataRank · unranked
134 citations

Dmitry Grinevich, Siddhartha Thakur, Michael A. Balamotis, Tuval Ben Yehezkel, Benjamin J. Callahan

Serovar-level identification of bacterial foodborne pathogens from full-length 16S rRNA gene sequencing

mSystems(2024)10.1128/msystems.00757-23
N/A
0.529DataRank · unranked
10 citations

Lyndy Harden, Siddhartha Thakur, Benjamin J. Callahan, Dmitry Grinevich

Evidence of sheep and abattoir environment as important reservoirs of multidrug resistant Salmonella and extended-spectrum beta-lactamase Escherichia coli

International Journal of Food Microbiology(2021)10.1016/j.ijfoodmicro.2021.109516
N/A
0DataRank · unranked
30 citations

S. Keelara, Maria Correa, Derek M. Foster, Wondwossen A. Gebreyes, Awa Aïdara‐Kane +4 more

Resistome of a carbapenemase-producing novel ST232 Klebsiella michiganensis isolate from urban hospital effluent in South Africa

Journal of Global Antimicrobial Resistance(2021)10.1016/j.jgar.2021.01.004
N/A
0DataRank · unranked
13 citations

Štefan Schmidt, Siddhartha Thakur, Paula J. Fedorka–Cray, S. Keelara, Lyndy Harden +2 more

Genomic screening of antimicrobial resistance markers in UK and US Campylobacter isolates highlights stability of resistance over an 18 year period

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.24.457564
N/A
0DataRank · unranked
0 citations

Siddhartha Thakur, Joaquín M. Prada, Jai W. Mehat, Roberto M. La Ragione, Arnoud H. M. van Vliet

Multidrug resistance and virulence genes carried by mobile genomic elements in Salmonella enterica isolated from live food animals, processed, and retail meat in North Carolina, 2018–2019

International Journal of Food Microbiology(2022)10.1016/j.ijfoodmicro.2022.109821
N/A
0DataRank · unranked
30 citations

Erin Harrell, Lyndy Harden, Siddhartha Thakur, Dawn Hull

Detection of resistance and virulence plasmids in Campylobacter coli and Campylobacter jejuni isolated from North Carolina food animal production, 2018–2019

Food Microbiology(2023)10.1016/j.fm.2023.104348
N/A
0DataRank · unranked
10 citations

Erin Harrel, Lyndy Harden, Siddhartha Thakur, Dawn Hull

Serovar-level Identification of Bacterial Foodborne Pathogens From Full-length 16S rRNA Gene Sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.28.546915
N/A
0DataRank · unranked
2 citations

Lyndy Harden, Siddhartha Thakur, Benjamin J. Callahan, Dmitry Grinevich

Class 1 integron-borne cassettes harboring blaCARB-2 gene in multidrug-resistant and virulent Salmonella Typhimurium ST19 strains recovered from clinical human stool samples, United States

PLoS ONE(2020)10.1371/journal.pone.0240978
N/A
0DataRank · unranked
25 citations

Fábio P. Sellera, Ralf Lopes, Shivaramu Keelara, Mariza Landgraf, Shermalyn R. Greene +3 more

Risk factors for fluoroquinolone- and macrolide-resistance among swine Campylobacter coli using multi-layered chain graphs

PLoS Computational Biology(2025)10.1371/journal.pcbi.1012797
N/A
0DataRank · unranked
1 citations

William J. Love, Manuel Jara, Arnoud H. M. van Vliet, Siddhartha Thakur, Cristina Lanzas +1 more

Ultra-accurate Microbial Amplicon Sequencing Directly from Complex Samples with Synthetic Long Reads

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.07.192286
N/A
0DataRank · unranked
11 citations

Dmitry Grinevich, Siddhartha Thakur, Michael A Balamotis, Tuval Ben Yehezkel, Benjamin J. Callahan

Antimicrobial resistance and interspecies gene transfer in Campylobacter coli and Campylobacter jejuni isolated from food animals, poultry processing, and retail meat in North Carolina, 2018–2019

PLoS ONE(2021)10.1371/journal.pone.0246571
N/A
0DataRank · unranked
75 citations

Erin Harrell, Arnoud H. M. van Vliet, Maria Correa, Siddhartha Thakur, Dawn Hull