L. Stirling Churchman

Also affiliated with Boston VA Research Institute

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 44 papers. Top paper: “Transcription elongation is finely tuned by dozens of regulatory factors”.

Transcription elongation is finely tuned by dozens of regulatory factors

eLife(2022)10.7554/elife.78944

N/A

0.827DataRank · unranked

23 citations

Kevin Harlen, Kate C Lachance, Kristine L. Trotta, Erin E. Smith, Christian Brion +3 more

Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle

Molecular Cell(2024)10.1016/j.molcel.2024.06.008

N/A

0.624DataRank · unranked

63 citations

Brendan M. Smalec, Albert Xu, Karine Choquet, Erik McShane, Ziad Jowhar +8 more

Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01225-6

N/A

0.609DataRank · unranked

57 citations

Thomas W. Tullius, Katja G. Hansen, Danilo Dubocanin, Mary Couvillion, Andrew B. Stergachis +2 more

Intronic small nucleolar RNAs regulate host gene splicing through base pairing with their adjacent intronic sequences

Genome biology(2023)10.1186/s13059-023-03002-y

N/A

0.553DataRank · unranked

39 citations

Laurence Faucher‐Giguère, Ann‐Kathrin Emmerichs, Karine Choquet, Kristina Sungeun Song, Gabrielle Deschamps-Francoeur +8 more

RNA polymerase II pausing temporally coordinates cell cycle progression and erythroid differentiation

Developmental Cell(2023)10.1016/j.devcel.2023.07.018

N/A

0.538DataRank · unranked

35 citations

Hope E. Merens, Alexis Caulier, Claudia Fiorini, Jacob C. Ulirsch, Robert Ietswaart +13 more

Essential histone chaperones collaborate to regulate transcription and chromatin integrity

Genes & Development(2021)10.1101/gad.348431.121

N/A

0.533DataRank · unranked

34 citations

James Chuang, Dhawal Jain, Natalia I. Reim, Francheska López-Rivera, Magdalena Murawska +5 more

Post-transcriptional splicing can occur in a slow-moving zone around the gene

eLife(2023)10.7554/elife.91357

N/A

0.475DataRank · unranked

12 citations

Aoife O'Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Post-transcriptional splicing can occur in a slow-moving zone around the gene

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.06.028092

N/A

0.464DataRank · unranked

21 citations

Aoife O’Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Balanced mitochondrial and cytosolic translatomes underlie the biogenesis of human respiratory complexes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.31.446345

N/A

0.385DataRank · unranked

12 citations

Mary Couvillion, Erik McShane, Katja G. Hansen, J. Conor Moran, Antoni Barrientos +2 more

A risk-reward tradeoff of high ribosome production in proliferating cells

10.1101/458810

N/A

0.380DataRank · unranked

4 citations

Nicoletta Commins, Michael Springer, David Pincus, L. Stirling Churchman, Blake W. Tye

Genetic regulation of nascent RNA maturation revealed by direct RNA nanopore sequencing

Genome Research(2025)10.1101/gr.279203.124

N/A

0.334DataRank · unranked

7 citations

Louis-Philippe Chaumont, Simon Bache, Autum R. Baxter‐Koenigs, L. Stirling Churchman, Karine Choquet

Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.2

N/A

0.312DataRank · unranked

7 citations

Aoife O’Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Elongation rate of RNA polymerase II affects pausing patterns across 3′ UTRs

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105289

N/A

0.269DataRank · unranked

5 citations

Christian Brion, Zarmik Moqtaderi, Joseph V. Geisberg, L. Stirling Churchman, Kevin Struhl +1 more

Context-specific inhibition of mitochondrial ribosomes by phenicol and oxazolidinone antibiotics

10.1101/2024.08.21.609012

N/A

0.241DataRank · unranked

4 citations

Tushar Raskar, Mary Couvillion, Muhoon Lee, Jordan Kleinman, Nono Takeuchi-Tomita +4 more

Transcription arrest induces formation of RNA granules in mitochondria

Life Science Alliance(2025)10.26508/lsa.202403082

N/A

0.208DataRank · unranked

3 citations

Autum R. Baxter‐Koenigs, Caroline A. M. Weiss, Erik McShane, L. Stirling Churchman, Katja G. Hansen

Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.1

N/A

0DataRank · unranked

0 citations

Aoife O’Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Author Response: Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.2.sa3

N/A

0DataRank · unranked

0 citations

Aoife O’Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Reviewer #1 (Public Review): Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.2.sa1

N/A

0DataRank · unranked

0 citations

Aoife O’Farrell, Ian Dardani, Margaret Dunagin, Chris Coté, Yihan Wan +13 more

The yeast exoribonuclease Xrn1 and associated factors modulate RNA polymerase II processivity in 5‘ and 3‘ gene regions

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.013426

N/A

0DataRank · unranked

45 citations

Yun S. Song, Nir Yosef, Julia di Iulio, L. Stirling Churchman, Mordechai Choder +1 more

A kinetic dichotomy between mitochondrial and nuclear gene expression processes

Molecular Cell(2024)10.1016/j.molcel.2024.02.028

N/A

0DataRank · unranked

59 citations

Mary Couvillion, Robert Ietswaart, Gyan Prakash, Brendan M. Smalec, Iliana Soto +4 more

Proteome-scale movements and compartment connectivity during the eukaryotic cell cycle

Cell(2024)10.1016/j.cell.2024.02.014

N/A

0DataRank · unranked

37 citations

Benjamin Grys, Oren Kraus, Helena Friesen, Catherine Ross, Myra Paz David Masinas +10 more

RNA polymerases reshape chromatin architecture and couple transcription on individual fibers

Molecular Cell(2024)10.1016/j.molcel.2024.08.013

N/A

0DataRank · unranked

27 citations

R. Stefan Isaac, Danilo Dubocanin, Jane Ranchalis, L. Stirling Churchman, Andrew B. Stergachis +1 more

Post-transcriptional splicing can occur in a slow-moving zone around the gene

eLife(2024)10.7554/elife.91357.3

N/A

0DataRank · unranked

14 citations

Aoife O'Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Central dogma rates in human mitochondria

Human Molecular Genetics(2024)10.1093/hmg/ddae036

N/A

0DataRank · unranked

10 citations

L. Stirling Churchman, Erik McShane

Set2 methyltransferase facilitates cell cycle progression by maintaining transcriptional fidelity

UNC Libraries(2024)10.17615/9kz2-x510

N/A

0DataRank · unranked

1 citations

Michael J. Emanuele, Deepak Kumar Jha, L. Stirling Churchman, W. Kimryn Rathmell, Rajarshi Choudhury +6 more

Genetic regulation of nascent RNA maturation revealed by direct RNA nanopore sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.29.610338

N/A

0DataRank · unranked

0 citations

Louis-Philippe Chaumont, Simon Bache, Autum R. Baxter‐Koenigs, L. Stirling Churchman, Karine Choquet

HIF regulates multiple translated endogenous retroviruses: Implications for cancer immunotherapy

Cell(2025)10.1016/j.cell.2025.01.046

N/A

0DataRank · unranked

56 citations

David A. Braun, Karl R. Clauser, Vijyendra Ramesh, Nitin H. Shirole, Joseph E. Duke-Cohan +41 more

A molecular switch at the yeast mitoribosomal tunnel exit controls cytochrome b synthesis

Nucleic Acids Research(2025)10.1093/nar/gkaf634

N/A

0DataRank · unranked

3 citations

Joseph B. Bridgers, Mary Couvillion, Abeer Prakash Singh, Ignasi Forné, Axel Imhof +3 more

A molecular switch at the yeast mitoribosomal tunnel exit controls cytochrome b synthesis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.30.635641

N/A

0DataRank · unranked

0 citations

Joseph B. Bridgers, Mary Couvillion, Abeer Prakash Singh, Ignasi Forné, Axel Imhof +3 more

Reviewer #2 (Public Review): Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.2.sa0

N/A

0DataRank · unranked

0 citations

Aoife O'Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more

Essential histone chaperones collaborate to regulate transcription and chromatin integrity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.04.368589

N/A

0DataRank · unranked

0 citations

James Chuang, Dhawal Jain, Natalia I. Reim, Francheska López-Rivera, Magdalena Murawska +5 more

GeneWalk identifies relevant gene functions for a biological context using network representation learning

Genome biology(2021)10.1186/s13059-021-02264-8

N/A

0DataRank · unranked

60 citations

Benjamin M. Gyori, John A. Bachman, Peter K. Sorger, L. Stirling Churchman, Robert Ietswaart

Hsf1 activation by proteotoxic stress requires concurrent protein synthesis

Molecular Biology of the Cell(2021)10.1091/mbc.e21-01-0014

N/A

0DataRank · unranked

43 citations

L. Stirling Churchman, Blake Tye

Balanced mitochondrial and cytosolic translatomes underlie the biogenesis of human respiratory complexes

Genome biology(2022)10.1186/s13059-022-02732-9

N/A

0DataRank · unranked

119 citations

Mary Couvillion, Katja G. Hansen, Erik McShane, J. Conor Moran, Antoni Barrientos +2 more

Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.21.504696

N/A

0DataRank · unranked

44 citations

Robert Ietswaart, Karine Choquet, Erik McShane, Emma R. West, L. Stirling Churchman +1 more

Pre-mRNA splicing order is predetermined and maintains splicing fidelity across multi-intronic transcripts

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.12.503515

N/A

0DataRank · unranked

10 citations

Autum Koenigs, Sarah-Luisa Dülk, Brendan M. Smalec, Silvi Rouskin, L. Stirling Churchman +1 more

Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.25.509398

N/A

0DataRank · unranked

8 citations

Thomas W. Tullius, Katja G. Hansen, Danilo Dubocanin, Mary Couvillion, Andrew B. Stergachis +2 more

Regulators of mitonuclear balance link mitochondrial metabolism to mtDNA expression

Nature Cell Biology(2023)10.1038/s41556-023-01244-3

N/A

0DataRank · unranked

41 citations

Gyan Prakash, R. Stefan Isaac, Karine Choquet, Iliana Soto, Boryana Petrova +4 more

Pre-mRNA splicing order is predetermined and maintains splicing fidelity across multi-intronic transcripts

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01035-2

N/A

0DataRank · unranked

31 citations

Autum R. Baxter‐Koenigs, Sarah-Luisa Dülk, Brendan M. Smalec, Silvi Rouskin, L. Stirling Churchman +1 more

A kinetic dichotomy between mitochondrial and nuclear gene expression drives OXPHOS biogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.09.527880

N/A

0DataRank · unranked

8 citations

Mary Couvillion, Robert Ietswaart, Gyan Prakash, Brendan M. Smalec, Iliana Soto +4 more

Genome-wide screens for mitonuclear co-regulators uncover links between compartmentalized metabolism and mitochondrial gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.11.528118

N/A

0DataRank · unranked

4 citations

Gyan Prakash, Karine Choquet, Iliana Soto, Boryana Petrova, Hope E. Merens +3 more

RNA Polymerase II pausing temporally coordinates cell cycle progression and erythroid differentiation

medRxiv(2023)10.1101/2023.03.03.23286760

N/A

0DataRank · unranked

3 citations

Hope E. Merens, Claudia Fiorini, Alexis Caulier, Jacob C. Ulirsch, Robert Ietswaart +13 more

RNA polymerases reshape chromatin and coordinate transcription on individual fibers

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573133

N/A

0DataRank · unranked

3 citations

R. Stefan Isaac, Jane Ranchalis, Danilo Dubocanin, L. Stirling Churchman, Andrew B. Stergachis +1 more

Reviewer #2 (Public Review): Post-transcriptional splicing can occur in a slow-moving zone around the gene

(2023)10.7554/elife.91357.1.sa0

N/A

0DataRank · unranked

0 citations

Aoife O'Farrell, Ian Dardani, Margaret C. Dunagin, Chris Coté, Yihan Wan +13 more