Yang Xu

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Radiation-induced DNA damage and repair effects on 3D genome organization”.

Radiation-induced DNA damage and repair effects on 3D genome organization

Nature Communications(2020)10.1038/s41467-020-20047-w

N/A

0DataRank · unranked

127 citations

Trevor F. Freeman, Yang Xu, Rosela Golloshi, Mary A. Stallard, Ashtyn M Hill +4 more

SMILE: mutual information learning for integration of single-cell omics data

Bioinformatics(2021)10.1093/bioinformatics/btab706

N/A

0DataRank · unranked

74 citations

Priyojit Das, Rachel Patton McCord, Yang Xu

Chromosome compartmentalization alterations in prostate cancer cell lines model disease progression

The Journal of Cell Biology(2021)10.1083/jcb.202104108

N/A

0DataRank · unranked

42 citations

Priyojit Das, Renata Dos Reis Marques, Yang Xu, Justin M. Roberts, Jacob T. Sanders +3 more

CoSTA: unsupervised convolutional neural network learning for spatial transcriptomics analysis

BMC Bioinformatics(2021)10.1186/s12859-021-04314-1

N/A

0DataRank · unranked

33 citations

Rachel Patton McCord, Yang Xu

Alterations in chromosome spatial compartmentalization classify prostate cancer progression

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.15.440056

N/A

0DataRank · unranked

2 citations

Priyojit Das, Renata Dos Reis Marques, Yang Xu, Rachel Patton McCord, Rebeca San Martin

Diagonal integration of multimodal single-cell data: potential pitfalls and paths forward

Nature Communications(2022)10.1038/s41467-022-31104-x

N/A

0DataRank · unranked

38 citations

Rachel Patton McCord, Yang Xu

Loops, topologically associating domains, compartments, and territories are elastic and robust to dramatic nuclear volume swelling

Scientific Reports(2022)10.1038/s41598-022-08602-5

N/A

0DataRank · unranked

34 citations

Rosela Golloshi, Priyojit Das, Yang Xu, Peyton H. Terry, Darrian G. Nash +3 more

sciCAN: single-cell chromatin accessibility and gene expression data integration via cycle-consistent adversarial network

npj Systems Biology and Applications(2022)10.1038/s41540-022-00245-6

N/A

0DataRank · unranked

27 citations

Edmon Begoli, Rachel Patton McCord, Yang Xu

SnapShot: Chromosome organization

Molecular Cell(2022)10.1016/j.molcel.2022.05.020

N/A

0DataRank · unranked

3 citations

Yang Xu, Heng Li, Priyojit Das, Rebeca San Martin, Rachel Patton McCord

Fast model-free standardization and integration of single-cell transcriptomics data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.28.486110

N/A

0DataRank · unranked

0 citations

Rafael Kramann, Rachel Patton McCord, Sikander Hayat, Yang Xu

MASI enables fast model-free standardization and integration of single-cell transcriptomics data

Communications Biology(2023)10.1038/s42003-023-04820-3

N/A

0DataRank · unranked

4 citations

Rafael Kramann, Rachel Patton McCord, Sikander Hayat, Yang Xu

Fast model-free standardization and integration of single-cell transcriptomics data

Research Square(2023)10.21203/rs.3.rs-2485985/v1

N/A

0DataRank · unranked

0 citations

Rafael Kramann, Rachel Patton McCord, Sikander Hayat, Yang Xu