Deborah T. Hung

Also affiliated with Harvard University, Massachusetts General Hospital, Integrated Solutions for Systems (United States)

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

medRxiv(2022)10.1101/2022.02.02.22269258

Top 100%

0DataRank

Top 100%0 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +9 more

Papers

Driven by 45 papers — median percentile 0. Top paper: “Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing”.

Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing

New England Journal of Medicine(2020)10.1056/nejmc2026172

N/A

14.8DataRank · unranked

809 citations

Alim Ladha, Makoto Saito, Nam-Gyun Kim, Ann E. Woolley, Michael Segel +18 more

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

An immune-cell signature of bacterial sepsis

Nature Medicine(2020)10.1038/s41591-020-0752-4

N/A

10.2DataRank · unranked

519 citations

Michael R. Filbin, Roby P. Bhattacharyya, Kianna Billman, Thomas Eisenhaure, Deborah T. Hung +6 more

B cell genomics behind cross-neutralization of SARS-CoV-2 variants and SARS-CoV

Cell(2021)10.1016/j.cell.2021.04.032

N/A

2.9DataRank · unranked

100 citations

Christopher O. Barnes, Basak Eraslan, Andrew Hudak, Jennifer R. Keeffe, Lisa A. Cosimi +34 more

Nucleic acid detection with CRISPR-Cas13a/C2c2

Science(2017)10.1126/science.aam9321

N/A

1.2DataRank · unranked

3722 citations

Omar O. Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J. Dy, Julia Joung +15 more

Massively multiplexed nucleic acid detection with Cas13

Nature(2020)10.1038/s41586-020-2279-8

N/A

0.999DataRank · unranked

780 citations

Cameron Myhrvold, Sri Gowtham Thakku, Catherine A. Freije, Hayden C. Metsky, David Yang +13 more

Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.280180

N/A

0.938DataRank · unranked

16 citations

Michael R. Filbin, Roby P. Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman +14 more

Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses

Cell(2015)10.1016/j.cell.2015.08.027

N/A

0.878DataRank · unranked

347 citations

Nathan Haseley, Douglas Brown, Cristina Penaranda, John J. Trombetta, Rahul Satija +7 more

Plasma from patients with bacterial sepsis or severe COVID-19 induces suppressive myeloid cell production from hematopoietic progenitors in vitro

Science Translational Medicine(2021)10.1126/scitranslmed.abe9599

N/A

0.701DataRank · unranked

106 citations

Michael R. Filbin, Roby P. Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman +13 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.27.514070

N/A

0.677DataRank · unranked

16 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +63 more

MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis

Genome Biology(2012)10.1186/gb-2012-13-1-r6

N/A

0.561DataRank · unranked

41 citations

Deborah Hung, Prisca Liberali, Bonnie Berger, Sarah A. Stanley, Deborah T. Hung +1 more

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

Genome Biology(2025)10.1186/s13059-025-03499-5

N/A

0.363DataRank · unranked

7 citations

Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey +70 more

Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses

Cell(2015)10.1016/j.cell.2015.09.044

N/A

0.241DataRank · unranked

4 citations

Nathan Haseley, Douglas Brown, Cristina Penaranda, John J. Trombetta, Rahul Satija +8 more

Bacterial droplet-based single-cell RNA-seq reveals heterogeneity in bacterial populations and in response to antibiotic perturbation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.01.502326

N/A

0.241DataRank · unranked

4 citations

Haley M. Amemiya, Lorrie L. He, Shivam J. Gandhi, Robert Nicol, Roby P. Bhattacharyya +3 more

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.08.471225

N/A

0.165DataRank · unranked

2 citations

Abigail L. Manson, Bruce J. Walker, Thea Brennan-Krohn, Colin J. Worby, Peijun Ma +27 more

Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development

Research Square(2022)10.21203/rs.3.rs-1416969/v1

N/A

0.104DataRank · unranked

1 citations

Eric M. Brown, Maura Benson, Liat Amir-Zilberstein, Sung‐Moo Park, Vladislav Pokatayev +23 more

Genetic determinants facilitating the evolution of resistance to carbapenem antibiotics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.11.430761

N/A

0.104DataRank · unranked

1 citations

Lorrie L. He, Alejandro Pironti, Hannah H. Laibinis, Christoph M. Ernst, Abigail L. Manson +5 more

8-Hydroxyquinoline Series Exerts Bactericidal Activity against Mycobacterium tuberculosis Via Copper-Mediated Toxicity

ACS Infectious Diseases(2024)10.1021/acsinfecdis.4c00582

N/A

0DataRank · unranked

18 citations

Arielle Butts, Eric Greve, Yan Cheung, Eduard Melief, James Gomez +3 more

Discovery of a Pseudomonas aeruginosa-specific small molecule targeting outer membrane protein OprH-LPS interaction by a multiplexed screen

Cell chemical biology(2024)10.1016/j.chembiol.2024.12.001

N/A

0DataRank · unranked

8 citations

Thulasi Warrier, Sulyman Barkho, Josephine Bagnall, Keith P. Romano, T. L. White +13 more

Perturbation-specific transcriptional mapping for unbiased target elucidation of antibiotics

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2409747121

N/A

0DataRank · unranked

7 citations

Josephine Bagnall, Thulasi Warrier, Jaryd Sullivan, Kristina Ferrara, Marek Orzechowski +6 more

Evaluation of expanded 2-aminobenzothiazole library as inhibitors of a model histidine kinase and virulence suppressors in Pseudomonas aeruginosa

Bioorganic Chemistry(2024)10.1016/j.bioorg.2024.107840

N/A

0DataRank · unranked

4 citations

Hannah K. Lembke, Jeffrey L. Gaulin, Patricia Bouchard, Alex R. Villarreal, Mitchell R. Penningroth +11 more

“Multiplexed screen identifies a Pseudomonas aeruginosa -specific small molecule targeting the outer membrane protein OprH and its interaction with LPS”

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.16.585348

N/A

0DataRank · unranked

5 citations

Thulasi Warrier, Sulyman Barkho, Josephine Bagnall, Keith P. Romano, T. L. White +13 more

Essential and virulence-related protein interactions of pathogens revealed through deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.589144

N/A

0DataRank · unranked

2 citations

Jing Zhang, Minkyung Baek, Yaxi Wang, Aditya Krishnakumar, Jimin Pei +10 more

Massively parallel combination screen reveals small molecule sensitization of antibiotic-resistant Gram-negative ESKAPE pathogens

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.26.586803

N/A

0DataRank · unranked

1 citations

Meilin Zhu, Benjamin Peters, Efrat Hamami, Julie Chen, Kathleen P. Davis +18 more

Structure and inhibition mechanisms of Mycobacterium tuberculosis essential transporter efflux protein A

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.04.611325

N/A

0DataRank · unranked

1 citations

Meghna Gupta, James E Gomez, Sulyman Barkho, Ziqiang Guan, Ashley Y Eng +6 more

Perturbation-Specific Transcriptional Mapping for unbiased target elucidation of antibiotics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.25.590978

N/A

0DataRank · unranked

0 citations

Josephine Bagnall, Thulasi Warrier, Jaryd Sullivan, Kristina Ferrara, Marek Orzechowski +6 more

Structure and inhibition mechanisms of Mycobacterium tuberculosis essential transporter efflux protein A

Nature Communications(2025)10.1038/s41467-025-58133-6

N/A

0DataRank · unranked

1 citations

Meghna Gupta, James E Gomez, Sulyman Barkho, Ziqiang Guan, Ashley Y Eng +6 more

An Inducible CRISPRi system for phenotypic analysis of essential genes in Pseudomonas aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.11.675340

N/A

0DataRank · unranked

1 citations

Kristina Ferrara, Rebecca Barrick, Keith P. Romano, Thulasi Warrier, Deborah T. Hung +1 more

Saskemycin, a potent and selective antimycobacterial agent targeting a unique site on the ribosome

Research Square(2025)10.21203/rs.3.rs-7820265/v1

N/A

0DataRank · unranked

0 citations

Michael A. Cook, Min Xu, Martino Morici, Dmitrii Y. Travin, Wenliang Wang +24 more

Adaptive evolution of virulence and persistence in carbapenem-resistant Klebsiella pneumoniae

Nature Medicine(2020)10.1038/s41591-020-0825-4

N/A

0DataRank · unranked

323 citations

Julian R. Braxton, Carlos A. Rodríguez-Osorio, Anna P. Zagieboylo, Li Li, Alejandro Pironti +9 more

SARS-CoV-2 hijacks folate and one-carbon metabolism for viral replication

Nature Communications(2021)10.1038/s41467-021-21903-z

N/A

0DataRank · unranked

157 citations

Rui Guo, Sharon H. Kim, Hardik Shah, Shuting Zhang, Jin Hua Liang +8 more

Dual transcriptional analysis reveals adaptation of host and pathogen to intracellular survival of Pseudomonas aeruginosa associated with urinary tract infection

PLoS Pathogens(2021)10.1371/journal.ppat.1009534

N/A

0DataRank · unranked

59 citations

Nicole M. Chumbler, Deborah T. Hung, Cristina Peñaranda

Selective Permeabilization of Gram-Negative Bacterial Membranes Using Multivalent Peptide Constructs for Antibiotic Sensitization

ACS Infectious Diseases(2021)10.1021/acsinfecdis.0c00805

N/A

0DataRank · unranked

36 citations

Kelsey E. Hern, Chayanon Ngambenjawong, Katie Lee, Ester J. Kwon, Deborah T. Hung +2 more

Chemical-genetic interaction mapping links carbon metabolism and cell wall structure to tuberculosis drug efficacy

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.08.439092

N/A

0DataRank · unranked

2 citations

Peter O. Oluoch, Nadine Ruecker, Megan K. Proulx, Vijay Soni, Kenan C. Murphy +19 more

Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants

Nature Medicine(2022)10.1038/s41591-022-01734-1

N/A

0DataRank · unranked

306 citations

Meilin Zhu, Catherine Hua, Juliane Weller, Marzieh Ezzaty Mirhashemi, Tien G. Nguyen +45 more

Targeting LPS biosynthesis and transport in gram-negative bacteria in the era of multi-drug resistance

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research(2022)10.1016/j.bbamcr.2022.119407

N/A

0DataRank · unranked

77 citations

Deborah T. Hung, Keith P. Romano

Multiplexed detection of bacterial nucleic acids using Cas13 in droplet microarrays

PNAS Nexus(2022)10.1093/pnasnexus/pgac021

N/A

0DataRank · unranked

33 citations

Cheri M. Ackerman, Cameron Myhrvold, Roby P. Bhattacharyya, Jonathan Livny, Peijun Ma +5 more

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac505

N/A

0DataRank · unranked

5 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +10 more

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

medRxiv(2022)10.1101/2022.02.02.22269258

Top 100%

0DataRank

Top 100%0 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +9 more

Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states

Cell(2023)10.1016/j.cell.2023.01.002

N/A

0DataRank · unranked

289 citations

Haley M. Amemiya, Lorrie L. He, Shivam J. Gandhi, Robert Nicol, Roby P. Bhattacharyya +3 more

Identification of host regulators of Mycobacterium tuberculosis phenotypes uncovers a role for the MMGT1-GPR156 lipid droplet axis in persistence

Cell Host & Microbe(2023)10.1016/j.chom.2023.05.009

N/A

0DataRank · unranked

15 citations

Chih-Hung Chou, Motohiko Kadoki, Daniel B. Graham, Jacques Deguine, Deborah T. Hung +2 more

Benzene Amide Ether Scaffold is Active against Non-replicating and Intracellular Mycobacterium tuberculosis

ACS Infectious Diseases(2023)10.1021/acsinfecdis.3c00275

N/A

0DataRank · unranked

6 citations

Sultan Chowdhury, James Gomez, Deborah T. Hung, Tanya Parish, Sara Ahmed

A tryptophan metabolite modulates the host response to bacterial infection via kainate receptors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.16.553532

N/A

0DataRank · unranked

1 citations

Anne E. Clatworthy, Emily Goering, Stephanie M. Blackwood, Elizabeth J. Salm, Catherine Choi +6 more

Evaluation of Expanded 2-Aminobenzothiazole Library for Inhibition of Pseudomonas aeruginosa Virulence Phenotypes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.02.539119

N/A

0DataRank · unranked

0 citations

Hannah K. Lembke, Jeffrey L. Gaulin, Patricia Bouchard, Alex R. Villarreal, Mitchell R. Penningroth +11 more

Fluorogenic Probes of the Mycobacterial Membrane as Reporters of Antibiotic Action

Journal of the American Chemical Society(2024)10.1021/jacs.4c00617

N/A

0DataRank · unranked

22 citations

Charles L. Dulberger, Theodore C. Warner, Robert A. Brown, Alexander Sturm, Eveline Ultee +9 more

Deborah T. Hung

Indexed papers

Top data-sharing exemplar

Papers