🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joakim Lundeberg

Science for Life Laboratory

ORCID: 0000-0003-4313-1601

Also affiliated with KTH Royal Institute of Technology

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
10.5Author DataRank

Indexed papers

6in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An integrated cell atlas of the lung in health and disease

Nature Medicine(2023)10.1038/s41591-023-02327-2
Top 4%
5.0DataRank
Top 4%781 citations

Ciro Ramírez-Suástegui, Tessa E. Gillett, Luke Zappia, Elo Madissoon, Nikolay S. Markov +87 more

Papers

Driven by 23 papers — median percentile 75. Top paper: “SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues”.

SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues

Cell(2020)10.1016/j.cell.2020.04.035
N/A
14.1DataRank · unranked
2492 citations

Samuel J. Allon, Sarah K. Nyquist, Ian Mbano, Vincent N. Miao, Constantine N. Tzouanas +92 more

Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma

Cell(2020)10.1016/j.cell.2020.05.039
N/A
10.2DataRank · unranked
1137 citations

Adam J. Rubin, Kim Thrane, Sizun Jiang, David L. Reynolds, Robin M. Meyers +16 more

An integrated cell atlas of the lung in health and disease

Nature Medicine(2023)10.1038/s41591-023-02327-2
Top 4%
5.0DataRank
Top 4%781 citations

Ciro Ramírez-Suástegui, Tessa E. Gillett, Luke Zappia, Elo Madissoon, Nikolay S. Markov +87 more

A roadmap for the Human Developmental Cell Atlas

Nature(2021)10.1038/s41586-021-03620-1
Top 6%
3.9DataRank
Top 6%194 citations

Deanne Taylor, Sten Linnarsson, Bruce J. Aronow, Samirkumar B. Amin, Roger A. Barker +53 more

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

Nature Communications(2021)10.1038/s41467-021-24467-0
N/A
2.0DataRank · unranked
43 citations

Nichelle I. Winters, Mei-i Chung, Chitra Joseph, Austin J. Gutierrez, Arun C. Habermann +67 more

High-density spatial transcriptomics arrays for in situ tissue profiling

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/563338
N/A
1.9DataRank · unranked
25 citations

Johanna Klughammer, Linnea Stenbeck, Fredrik Salmén, Tarmo Äijö, Richard Bonneau +9 more

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

Science(2016)10.1126/science.aaf2403
N/A
1.2DataRank · unranked
3731 citations

Fredrik Salmén, Anna Lundmark, José Fernandéz Navarro, Jens Magnusson, Stefania Giacomello +18 more

High-definition spatial transcriptomics for in situ tissue profiling

Nature Methods(2019)10.1038/s41592-019-0548-y
N/A
1.1DataRank · unranked
1196 citations

Gökçen Eraslan, Fredrik Salmén, Johanna Klughammer, Linnea Stenbeck, Denis Schapiro +13 more

Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19

Immunity(2020)10.1016/j.immuni.2020.11.017
N/A
0.901DataRank · unranked
405 citations

Neha Mishra, Florian Tran, Thomas Bahmer, Lena Best, Johanna I. Blase +169 more

The discovAIR project: a roadmap towards the Human Lung Cell Atlas

European Respiratory Journal(2022)10.1183/13993003.02057-2021
Top 25%
0.797DataRank
Top 25%26 citations

Laure-Emmanuelle Zaragosi, Elo Madissoon, Avi Srivastava, Alexandra B. Firsova, Elena De Domenico +36 more

Author response: The Human Cell Atlas

(2017)10.7554/elife.27041.011
Top 29%
0.700DataRank
Top 29%14 citations

Sarah A. Teichmann, Matthew E. Hurles, Ido Amit, Kerstin Lindblad‐Toh, Bernd Bodenmiller +60 more

Expansion spatial transcriptomics

Nature Methods(2023)10.1038/s41592-023-01911-1
N/A
0.609DataRank · unranked
57 citations

Žaneta Andrusivová, Yunming Wu, Chew Chai, Ludvig Larsson, Mengxiao He +4 more

Spatial landmark detection and tissue registration with deep learning

Nature Methods(2024)10.1038/s41592-024-02199-5
N/A
0.542DataRank · unranked
36 citations

Ludvig Bergenstråhle, Alma Andersson, Paulo Czarnewski, Johannes Olegård, Lukas Käll +2 more

Spatial single-cell atlas reveals regional variations in healthy and diseased human lung

Nature Communications(2025)10.1038/s41467-025-65704-0
N/A
0.345DataRank · unranked
9 citations

Sergio Marco Salas, Louis Benedikt Kuemmerle, Xesús M. Abalo, Alexandros Sountoulidis, Ludvig Larsson +24 more

An integrated cell atlas of the human lung in health and disease

Research Square(2022)10.21203/rs.3.rs-1438584/v1
Top 71%
0.127DataRank
Top 71%1 citations

Avi Srivastava, Daniel Strobl, Luke Zappia, Elo Madissoon, Nikolay S. Markov +80 more

The impact of gastrointestinal dysmotility on the aerodigestive microbiome of pediatric lung transplant recipients

The Journal of Heart and Lung Transplantation(2020)10.1016/j.healun.2020.11.013
N/A
0DataRank · unranked
6 citations

Debra Boyer, Gary Visner, Dawn Freiberger, Margot Lurie, Madeline Kane +7 more

Novel loss-of-function variant in DENND5A impedes melanosomal cargo transport and predisposes to familial cutaneous melanoma

Genetics in Medicine(2021)10.1016/j.gim.2021.09.003
N/A
0DataRank · unranked
3 citations

Per Johnsson, Lars Bräutigam, Xiaohong R. Yang, Kim Thrane, Jiwei Gao +15 more

Expansion Spatial Transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.25.513696
N/A
0DataRank · unranked
4 citations

Žaneta Andrusivová, Yunming Wu, Chew Chai, Ludvig Larsson, Mengxiao He +4 more

Spatial Transcriptomics Reveals Genes Associated with Dysregulated Mitochondrial Functions and Stress Signaling in Alzheimer Disease

iScience(2020)10.1016/j.isci.2020.101556
N/A
0DataRank · unranked
119 citations

Deborah L. Croteau, Aleksandra Jurek, Žaneta Andrusivová, Beimeng Yang, Yue Wang +10 more

A topographic lung cell atlas reveals regional variation in cell-type specific gene programs and identifies healthy and diseased cellular neighborhoods

Research Square(2024)10.21203/rs.3.rs-5046381/v1
N/A
0DataRank · unranked
0 citations

Sergio Marco Salas, Louis Kümmerle, Ludvig Larsson, Krishnaa T. Mahbubani, Alexandros Sountoulidis +25 more

Host-Pathogen Interactions in the Plasmodium -Infected Mouse Liver at Spatial and Single-Cell Resolution

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573046
N/A
0DataRank · unranked
0 citations

Miren Urrutia Iturritza, C. Zwicker, Bavo Vanneste, Noémi Van Hul, Elisa Semle +9 more

Host-pathogen interactions in the Plasmodium-infected mouse liver at spatial and single-cell resolution

Nature Communications(2024)10.1038/s41467-024-51418-2
N/A
0DataRank · unranked
21 citations

Miren Urrutia Iturritza, C. Zwicker, Bavo Vanneste, Noémi Van Hul, Elisa Semle +10 more

Single-Cell and Spatial Transcriptomic Analysis of Human Skin Delineates Intercellular Communication and Pathogenic Cells

Journal of Investigative Dermatology(2023)10.1016/j.jid.2023.02.040
N/A
0DataRank · unranked
67 citations

Mårten C. G. Winge, Hongyu Wang, Larry Chen, Margaret Guo, Alma Andersson +18 more