Ronan Chaligné

Also affiliated with New York Genome Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 30 papers. Top paper: “Discovery of Candidate DNA Methylation Cancer Driver Genes”.

Discovery of Candidate DNA Methylation Cancer Driver Genes

Cancer Discovery(2021)10.1158/2159-8290.cd-20-1334

N/A

2.1DataRank · unranked

72 citations

Loïc Renaud, Ronan Chaligné, Johannes Bloehdorn, Eugen Tausch, Daniel Mertens +14 more

RAS-mutant leukaemia stem cells drive clinical resistance to venetoclax

Nature(2024)10.1038/s41586-024-08137-x

N/A

1.7DataRank · unranked

86 citations

Saul Carcamo, Maria Sirenko, Abhishek Maiti, Hager Mansour, Gulay Ulukaya +23 more

MITI minimum information guidelines for highly multiplexed tissue images

Nature Methods(2022)10.1038/s41592-022-01415-4

N/A

1.7DataRank · unranked

88 citations

Clarence Yapp, Artem Sokolov, Sheila M. Reynolds, Yu-An Chen, Damir Sudar +95 more

Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths

Cell stem cell(2023)10.1016/j.stem.2023.07.012

N/A

1.5DataRank · unranked

63 citations

Paulina Chamely, Allegra G. Hawkins, Robert F. Stanley, Ariel D. Swett, Saravanan Ganesan +29 more

Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states

Nature Genetics(2021)10.1038/s41588-021-00927-7

N/A

0.824DataRank · unranked

242 citations

Federico Gaiti, Dana Silverbush, Joshua S. Schiffman, Hannah R. Weisman, Lloyd Kluegel +18 more

Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis

Science(2023)10.1126/science.add5327

N/A

0.803DataRank · unranked

211 citations

Direna Alonso‐Curbelo, Thomas Walle, José Reyes, Francisco M. Barriga, Doron Haviv +20 more

Anatomic position determines oncogenic specificity in melanoma

Nature(2022)10.1038/s41586-022-04584-6

N/A

0.694DataRank · unranked

101 citations

Miranda V. Hunter, Nelly M. Cruz, Arianna Baggiolini, Mohita Tagore, Yilun Ma +35 more

Engineering mtDNA deletions by reconstituting end joining in human mitochondria

Cell(2025)10.1016/j.cell.2025.02.009

N/A

0.641DataRank · unranked

28 citations

Max Land, Tamar Kavlashvili, Ruobing Cui, Min‐Soo Kim, Emily DeBitetto +16 more

Systematic Comparison of Pancreatic Ductal Adenocarcinoma Models Identifies a Conserved Highly Plastic Basal Cell State

Cancer Research(2022)10.1158/0008-5472.can-22-1742

N/A

0.510DataRank · unranked

29 citations

Olivera Grbovic-Huezo, Simon Joost, Anupriya Singhal, Melissa Blum, Katherine Wu +11 more

Tissue-specific features of the T cell repertoire after allogeneic hematopoietic cell transplantation in human and mouse

Science Translational Medicine(2023)10.1126/scitranslmed.abq0476

N/A

0.457DataRank · unranked

20 citations

Yuval Elhanati, Katherine Nichols, Nicholas R. Waters, Chi L. Nguyen, John Slingerland +39 more

Anatomic position determines oncogenic specificity in melanoma

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.14.383083

N/A

0.396DataRank · unranked

13 citations

Miranda V. Hunter, Nelly M. Cruz, Arianna Baggiolini, Mohita Tagore, Yilun Ma +35 more

Multilineage plasticity in prostate cancer through expansion of stem–like luminal epithelial cells with elevated inflammatory signaling

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.01.466599

N/A

0.312DataRank · unranked

7 citations

Jimmy L. Zhao, Joseph M. Chan, Martine P. Roudier, Kristine M. Wadosky, Anuradha Gopalan +25 more

Transcript-specific enrichment enables profiling rare cell states via scRNA-seq

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.27.587039

N/A

0.228DataRank · unranked

2 citations

Robert R. Stickels, Meril Takizawa, Benan N. Nalbant, Yu-Hsin Hsieh, Sidney Hwang +9 more

Metastatic site influences driver gene function in pancreatic cancer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.17.585402

N/A

0.208DataRank · unranked

3 citations

Francisco M. Barriga, Yu-Jui Ho, Direna Alonso‐Curbelo, Geulah Livshits, Richard P. Koche +14 more

Transcriptomic Plasticity Is a Hallmark of Metastatic Pancreatic Cancer

Cancer Research(2025)10.1158/0008-5472.can-25-1117

N/A

0.172DataRank · unranked

2 citations

Sitara Persad, Akimasa Hayashi, Shigeaki Umeda, Roshan Sharma, Yubin Xie +14 more

Signatures of early plasticity in the histological transformation of lung cancer.

Journal of Clinical Oncology(2024)10.1200/jco.2024.42.16_suppl.8042

N/A

0.104DataRank · unranked

1 citations

Monica F. Chen, Àlvaro Quintanal-Villalonga, Amin H. Sabet, Parvathy Manoj, Ojasvi Chaudhary +12 more

Mapping genotypes to chromatin accessibility profiles in single cells

Nature(2024)10.1038/s41586-024-07388-y

N/A

0DataRank · unranked

60 citations

Robert M. Myers, Saravanan Ganesan, Levan Mekerishvili, Sanjay Kottapalli, Tamara Prieto +22 more

Deconvoluting clonal and cellular architecture in IDH-mutant acute myeloid leukemia

Cell stem cell(2025)10.1016/j.stem.2025.04.012

N/A

0DataRank · unranked

19 citations

Soobeom Lee, Zhengxi Sun, Ronan Chaligné, Sanam Loghavi, Georgios Asimomitis +30 more

A RAS(ON) Multi-Selective Inhibitor Combination Therapy Triggers Long-term Tumor Control through Senescence-Associated Tumor-Immune Equilibrium in Pancreatic Ductal Adenocarcinoma

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1425

N/A

0DataRank · unranked

15 citations

Riccardo Mezzadra, Exequiel M. Sisso, Felix Mbuga, Rashi Raghulan, Almudena Chaves Perez +15 more

Single-cell multi-omics of human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation

Nature Genetics(2022)10.1038/s41588-022-01179-9

N/A

0DataRank · unranked

136 citations

Neville Dusaj, Franco Izzo, Rekha Murali, Robert M. Myers, Tarek H. Mouhieddine +12 more

Defining molecular circuits of CD8+ T cell responses in tissues during latent viral infection

The Journal of Experimental Medicine(2025)10.1084/jem.20242078

N/A

0DataRank · unranked

3 citations

J Zhang, J. J. Sauter, Mariah Lee, Brandon D. Ng, Sigrun V. Stulz +10 more

Single-cell multi-omics of human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.14.476225

N/A

0DataRank · unranked

10 citations

Neville Dusaj, Franco Izzo, Rekha Murali, Robert M. Myers, Tarek H. Mouhieddine +12 more

Integrated Single-Cell Genotyping and Chromatin Accessibility Charts JAK2 V617F Human Hematopoietic Differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.11.491515

N/A

0DataRank · unranked

10 citations

Franco Izzo, Sanjay Kottapalli, Tamara Prieto, Andrew Dunbar, Robert L. Bowman +15 more

Single-cell multi-omics defines the cell-type specific impact of splicing aberrations in human hematopoietic clonal outgrowths

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.08.495292

N/A

0DataRank · unranked

9 citations

Paulina Chamely, Allegra G. Hawkins, Mariela Cortés-López, Ariel D. Swett, Saravanan Ganesan +21 more

Type 1 interferon perturbates clonal competition by reshaping human blood development

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.28.509751

N/A

0DataRank · unranked

2 citations

Danielle Isakov, Shira Rosenberg, Miguel Quijada-Álamo, Mirca Saurty-Seerunghen, Sara Moein +31 more

Chromosome 9p21.3 Coordinates Cell Intrinsic and Extrinsic Tumor Suppression

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.22.504793

N/A

0DataRank · unranked

1 citations

Kaloyan M. Tsanov, Yu-Jui Ho, Noor Sohail, Amy Zhang, Timour Baslan +15 more

Distinct metabolic requirements regulate B cell activation and germinal center responses

Nature Immunology(2023)10.1038/s41590-023-01540-y

N/A

0DataRank · unranked

80 citations

Ryan Smolkin, Priyanka Chowdhury, Keith Conrad Fernandez, Youngjun Kim, Montserrat Cols +10 more

DNA methylation disruption reshapes the hematopoietic differentiation landscape

Nature Genetics(2020)10.1038/s41588-020-0595-4

N/A

0DataRank · unranked

258 citations

Stanley Chun-Wei Lee, Asaf Poran, Ronan Chaligné, Federico Gaiti, Baptiste Gross +17 more

Application of high-throughput single-nucleus DNA sequencing in pancreatic cancer

Nature Communications(2023)10.1038/s41467-023-36344-z

N/A

0DataRank · unranked

32 citations

Elias-Ramzey Karnoub, Shigeaki Umeda, Ronan Chaligné, Ignas Masilionis, Caitlin A. McIntyre +8 more

Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics

Nature Reviews Genetics(2020)10.1038/s41576-020-0265-5

N/A

0DataRank · unranked

391 citations

Ronan Chaligné, Dan A. Landau, Anna S. Nam