Peggy J. Farnham

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

36.2Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Papers

Driven by 17 papers — median percentile 98. Top paper: “Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project”.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Integrative analysis of 111 reference human epigenomes

Nature(2015)10.1038/nature14248

Top 1%

10.0DataRank

Top 1%7189 citations

Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen +93 more

Locating mammalian transcription factor binding sites: A survey of computational and experimental techniques

Genome Research(2006)10.1101/gr.4140006

N/A

9.3DataRank · unranked

219 citations

Victor X. Jin, Peggy J. Farnham, Steven J.M. Jones, Laura Elnitski

Defining functional DNA elements in the human genome

Proceedings of the National Academy of Sciences(2014)10.1073/pnas.1318948111

Top 3%

6.9DataRank

Top 3%755 citations

Valentina Snetkova, Louis Philip Benoit Bouvrette, Anshul Kundaje, Georgi K. Marinov, Lucas D. Ward +29 more

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Genome Research(2012)10.1101/gr.136184.111

N/A

1.2DataRank · unranked

2212 citations

Georgi K. Marinov, Anshul Kundaje, Yanxiao Zhang, Florencia Pauli, Serafim Batzoglou +46 more

Architecture of the human regulatory network derived from ENCODE data

Nature(2012)10.1038/nature11245

N/A

1.1DataRank · unranked

1548 citations

Anshul Kundaje, Manoj Hariharan, Stephen G. Landt, Koon-Kiu Yan, Chao Cheng +58 more

The PsychENCODE project

Nature Neuroscience(2015)10.1038/nn.4156

N/A

0.927DataRank · unranked

483 citations

Chunyu Liu, James A. Knowles, Flora M. Vaccarino, Philip L. De Jager, Gregory E. Crawford +87 more

Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3

Genome Biology(2012)10.1186/gb-2012-13-9-r52

N/A

0.695DataRank · unranked

102 citations

Rui Wang, Lijing Yao, Yu Gyoung Tak, Zhenqing Ye, Malaina Gaddis +4 more

Genome-wide analysis of HOXC4 and HOXC6 regulated genes and binding sites in prostate cancer cells

PLoS ONE(2020)10.1371/journal.pone.0228590

N/A

0.557DataRank · unranked

40 citations

Peggy J. Farnham, Zhifei Luo

TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma

PLoS Genetics(2020)10.1371/journal.pgen.1009023

N/A

0.494DataRank · unranked

26 citations

Chunli Yan, Diane S. Kang, Beiyun Zhou, Zea Borok, Crystal N. Marconett +4 more

Variants in ZFX are associated with an X-linked neurodevelopmental disorder with recurrent facial gestalt

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.01.007

N/A

0.442DataRank · unranked

18 citations

Katie Hutchison, Dilan Wellalage Don, George McGillivray, Tae‐Ik Choi, Carolyn A Allan +51 more

Reduction of ZFX levels decreases histone H4 acetylation and increases Pol2 pausing at target promoters

Nucleic Acids Research(2024)10.1093/nar/gkae372

N/A

0.228DataRank · unranked

3 citations

Katherine Hutchison, Yao Liu, Charles M. Nicolet, Shannon Schreiner, Nathan R. Zemke +2 more

FOXC1 Binds Enhancers and Promotes Cisplatin Resistance in Bladder Cancer

Cancers(2022)10.3390/cancers14071717

N/A

0DataRank · unranked

15 citations

Tong Xu, Maheen Iqbal, Tien‐Chan Hsieh, Zhifei Luo, Gangning Liang +4 more

m6A epitranscriptome analysis reveals differentially methylated transcripts that drive early chemoresistance in bladder cancer

NAR Cancer(2023)10.1093/narcan/zcad054

N/A

0DataRank · unranked

13 citations

Aubree Mades, Lisa Swartz, Maheen Iqbal, Tong Xu, Daniel Bsteh +4 more

Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation

UNC Libraries(2020)10.17615/39bq-mx53

N/A

0DataRank · unranked

0 citations

Matthew Grimmer, Ethan Ford, Sabine Stolzenburg, Ryan Lister, Peggy J. Farnham +1 more

Characterization of the ZFX family of transcription factors that bind downstream of the start site of CpG island promoters

Nucleic Acids Research(2020)10.1093/nar/gkaa384

N/A

0DataRank · unranked

51 citations

Andrew Perez, Shannon Schreiner, Charles M. Nicolet, Peggy J. Farnham, Stephanie W. Ni

Peggy J. Farnham

Indexed papers

Top data-sharing exemplar

Papers