Alan J. Wolfe

Also affiliated with Loyola University Chicago

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.4Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The EcoCyc Database in 2021

Frontiers in Microbiology(2021)10.3389/fmicb.2021.711077

Top 5%

4.2DataRank

Top 5%236 citations

Socorro Gama‐Castro, Amanda Mackie, Richard Billington, César Bonavides-Martínez, Ron Caspi +14 more

Papers

Driven by 39 papers — median percentile 81. Top paper: “The EcoCyc Database in 2021”.

The EcoCyc Database in 2021

Frontiers in Microbiology(2021)10.3389/fmicb.2021.711077

Top 5%

4.2DataRank

Top 5%236 citations

Socorro Gama‐Castro, Amanda Mackie, Richard Billington, César Bonavides-Martínez, Ron Caspi +14 more

Vaginal estrogen therapy is associated with increased Lactobacillus in the urine of postmenopausal women with overactive bladder symptoms

American Journal of Obstetrics and Gynecology(2020)10.1016/j.ajog.2020.08.006

N/A

2.9DataRank · unranked

85 citations

Susanne Taege, Roberto Limeira, Cynthia Brincat, Cara Joyce, Evann E. Hilt +6 more

Whole-Genome Sequencing of Staphylococcus aureus and Staphylococcus haemolyticus Clinical Isolates from Egypt

Microbiology Spectrum(2022)10.1128/spectrum.02413-21

Top 19%

1.1DataRank

Top 19%31 citations

Carine R. Mores, Catherine Putonti, Alan J. Wolfe, Alaa Abouelfetouh, Cesar Montelongo Hernandez

Symptom improvement with mirabegron treatment is associated with urobiome changes in adult women

International Urogynecology Journal(2022)10.1007/s00192-022-05190-w

N/A

0.607DataRank · unranked

10 citations

Elizabeth R. Mueller, Linda Brubaker, Alan J. Wolfe, Thomas Halverson

Bladder bacterial diversity differs in continent and incontinent women: a cross-sectional study

American Journal of Obstetrics and Gynecology(2020)10.1016/j.ajog.2020.04.033

N/A

0.606DataRank · unranked

56 citations

Huaiying Lin, Xiang Gao, Krystal Thomas‐White, Evann E. Hilt, Elizabeth R. Mueller +4 more

Cataloging the Phylogenetic Diversity of Human Bladder Bacterial Isolates

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.23.541916

Top 65%

0.208DataRank

Top 65%3 citations

Mark Khemmani, Thomas Halverson, Adriana Ene, Roberto Limeira, Lana Tinawi +5 more

Ur-ine Old Age: Urinary Microbiome of Older Community Dwelling Women

Cell Host & Microbe(2020)10.1016/j.chom.2020.07.012

N/A

0DataRank · unranked

2 citations

Linda Brubaker, Alan J. Wolfe

Temporal Dynamics of the Adult Female Lower Urinary Tract Microbiota

medRxiv(2020)10.1101/2020.03.06.20032193

N/A

0DataRank · unranked

4 citations

Birte Wolff, Thomas Halverson, Roberto Limeira, Linda Brubaker, Qunfeng Dong +3 more

Phenyl-Lactic Acid Is an Active Ingredient in Bactericidal Supernatants of Lactobacillus crispatus

Journal of Bacteriology(2021)10.1128/jb.00360-21

N/A

0DataRank · unranked

49 citations

Qihao Wu, Travis K. Price, Giuseppe Anthony Pistone, Katherine Diebel, Tim S. Bugni +2 more

Urinary microbiota of women with recurrent urinary tract infection: collection and culture methods

International Urogynecology Journal(2021)10.1007/s00192-021-04780-4

N/A

0DataRank · unranked

36 citations

Lindsey A. Burnett, Travis K. Price, Carrie E. Jung, Alan J. Wolfe, Linda Brubaker +1 more

The Good and the Bad: Ecological Interaction Measurements Between the Urinary Microbiota and Uropathogens

Frontiers in Microbiology(2021)10.3389/fmicb.2021.659450

N/A

0DataRank · unranked

33 citations

Thomas Halverson, Jolanda K. Brons, Alan J. Wolfe, Marjon G. J. de Vos, Laurens E. Zandbergen

Investigation of Plasmids Among Clinical Staphylococcus aureus and Staphylococcus haemolyticus Isolates From Egypt

Frontiers in Microbiology(2021)10.3389/fmicb.2021.659116

N/A

0DataRank · unranked

26 citations

Cesar Montelongo Hernandez, Catherine Putonti, Alan J. Wolfe, Alaa Abouelfetouh, Carine R. Mores

Examination of Staphylococcus aureus Prophages Circulating in Egypt

Viruses(2021)10.3390/v13020337

N/A

0DataRank · unranked

13 citations

Taylor Miller-Ensminger, Carine R. Mores, Silvia Giannattasio-Ferraz, Alan J. Wolfe, Alaa Abouelfetouh +2 more

Characterizing Plasmids in Bacteria Species Relevant to Urinary Health

Microbiology Spectrum(2021)10.1128/spectrum.00942-21

N/A

0DataRank · unranked

12 citations

Catherine Putonti, Alan J. Wolfe, Cesar Montelongo Hernandez

Genome Investigation of Urinary Gardnerella Strains and Their Relationship to Isolates of the Vaginal Microbiota

mSphere(2021)10.1128/msphere.00154-21

N/A

0DataRank · unranked

14 citations

Krystal Thomas‐White, Elias Crum, Evann E. Hilt, Travis K. Price, Alan J. Wolfe +1 more

A mouse model displays host and bacterial strain differences in Aerococcus urinae urinary tract infection

Biology Open(2021)10.1242/bio.058931

N/A

0DataRank · unranked

11 citations

Brian I. Choi, Jingjie Du, Christina A. Collins, Amanda L. Lewis, Catherine Putonti +2 more

Discriminating between JCPyV and BKPyV in Urinary Virome Data Sets

Viruses(2021)10.3390/v13061041

N/A

0DataRank · unranked

2 citations

Alan J. Wolfe, Catherine Putonti, Rita Mormando

Phylogenomic study of Staphylococcus aureus and Staphylococcus haemolyticus clinical isolates from Egypt

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.01.442118

N/A

0DataRank · unranked

1 citations

Carine R. Mores, Catherine Putonti, Alan J. Wolfe, Alaa Abouelfetouh, Cesar Montelongo Hernandez

A Child's urine is not sterile: A pilot study evaluating the Pediatric Urinary Microbiome

Journal of Pediatric Urology(2022)10.1016/j.jpurol.2022.02.025

N/A

0DataRank · unranked

48 citations

Hillary L. Copp, Thomas Halverson, Jingjie Du, Denise Juhr, Alan J. Wolfe +1 more

One Size Does Not Fit All: Variability in Urinary Symptoms and Microbial Communities

Frontiers in Urology(2022)10.3389/fruro.2022.890990

N/A

0DataRank · unranked

5 citations

Cara Joyce, Omar Abdul-Rahim, Hayley C. Barnes, Elizabeth R. Mueller, Alan J. Wolfe +3 more

Profiling the plasmid conjugation potential of urinary Escherichia coli

Microbial Genomics(2022)10.1099/mgen.0.000814

N/A

0DataRank · unranked

4 citations

Catherine Putonti, Alan J. Wolfe, Cesar Montelongo Hernandez

Urinary F plasmids reduce permissivity to coliphage infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.23.485578

N/A

0DataRank · unranked

0 citations

Catherine Putonti, Alan J. Wolfe, Cesar Montelongo Hernandez

Impact of intravesical Bacillus Calmette-Guérin and chemotherapy on the bladder microbiome in patients with non-muscle invasive bladder cancer

Frontiers in Cellular and Infection Microbiology(2023)10.3389/fcimb.2023.1125809

N/A

0DataRank · unranked

21 citations

Kayéromi Gomez, Shalin Desai, Hiten D. Patel, Goran Rac, Chirag Doshi +9 more

Comparative Genomic Study of Streptococcus anginosus Reveals Distinct Group of Urinary Strains

mSphere(2023)10.1128/msphere.00687-22

N/A

0DataRank · unranked

11 citations

Adriana Ene, Sandra Jablonska, Jingjie Du, Alan J. Wolfe, Catherine Putonti +1 more

First trimester “clean catch” urine and vaginal swab sample distinct microbiological niches

Microbiology Spectrum(2023)10.1128/spectrum.02638-23

N/A

0DataRank · unranked

9 citations

Peter E. Larsen, Thomas Halverson, Thaddeus Waters, Jean R. Goodman, Alan J. Wolfe +1 more

Urogenital urobiome of healthy children does not differ from that of children with bladder and bowel dysfunction

Journal of Pediatric Urology(2023)10.1016/j.jpurol.2023.04.009

N/A

0DataRank · unranked

9 citations

Mark Khemmani, Hui Liu, Thomas Halverson, Melline Fontes Noronha, Catherine S. Forster +3 more

Coliphages of the human urinary microbiota

PLoS ONE(2023)10.1371/journal.pone.0283930

N/A

0DataRank · unranked

4 citations

Zubia Merchant, Adriana Ene, Taylor Miller-Ensminger, Genevieve Johnson, Alan J. Wolfe +2 more

Metabolic syndrome and the urinary microbiome of patients undergoing percutaneous nephrolithotomy

Asian journal of urology(2023)10.1016/j.ajur.2022.08.007

N/A

0DataRank · unranked

3 citations

Chirag Doshi, Shalin Desai, Petar Bajic, Michelle Van Kuiken, Mark Khemmani +6 more

Urinary Plasmids Reduce Permissivity to Coliphage Infection

Microbiology Spectrum(2023)10.1128/spectrum.01309-23

N/A

0DataRank · unranked

2 citations

Catherine Putonti, Alan J. Wolfe, Cesar Montelongo Hernandez

Urine microbiome in individuals with an impaired immune system

Frontiers in Cellular and Infection Microbiology(2024)10.3389/fcimb.2023.1308665

N/A

0DataRank · unranked

11 citations

Alan J. Wolfe, Robert D. Burk, Noha S. Elsayed

Evidence of Lactobacillus strains shared between the female urinary and vaginal microbiota

Microbial Genomics(2024)10.1099/mgen.0.001267

N/A

0DataRank · unranked

10 citations

Baani Sabharwal, Leah Boger, Natalie Stegman, Alexander J. Kula, Alan J. Wolfe +3 more

The Urinary Microbiome

Infectious Disease Clinics of North America(2024)10.1016/j.idc.2024.03.003

N/A

0DataRank · unranked

9 citations

Alan J. Wolfe, Linda Brubaker, Toby C. Chai

Streptococcus anginosus of the urogenital tract: evidence of the same strain across anatomical sites of the same females

BMC Genomics(2025)10.1186/s12864-025-11973-4

N/A

0DataRank · unranked

3 citations

Jennifer Garcia-Israel, Leah Boger, Swarnali Banerjee, Alan J. Wolfe, Catherine Putonti +1 more

Detection, molecular epidemiology, and mapping of Anthrax outbreaks in Jordan, 2018-2021

Research Square(2025)10.21203/rs.3.rs-7086369/v1

N/A

0DataRank · unranked

0 citations

Mohammad Abu Lubad, Hamed Alzoubi, Daniel S. Schabacker, Sara Forrester, Scott Schlueter +6 more

Genomic Survey of E. coli From the Bladders of Women With and Without Lower Urinary Tract Symptoms

Frontiers in Microbiology(2020)10.3389/fmicb.2020.02094

N/A

0DataRank · unranked

61 citations

Taylor Miller-Ensminger, Adriana Ene, Zubia Merchant, Aashaka Shah, Athina Gerodias +35 more

Aerococcus urinae Isolated from Women with Lower Urinary Tract Symptoms: In Vitro Aggregation and Genome Analysis

Journal of Bacteriology(2020)10.1128/jb.00170-20

N/A

0DataRank · unranked

14 citations

Catherine Putonti, Krystal Thomas‐White, Amanda L. Lewis, Karen L. Visick, Nicole M. Gilbert +2 more

Characterization and spontaneous induction of urinary tract Streptococcus anginosus prophages

Journal of General Virology(2020)10.1099/jgv.0.001407

N/A

0DataRank · unranked

10 citations

Carine R. Mores, Alan J. Wolfe, Catherine Putonti, Bridget Brassil

Comparative Genomic Study of Lactobacillus jensenii and the Newly Defined Lactobacillus mulieris Species Identifies Species-Specific Functionality

mSphere(2020)10.1128/msphere.00560-20

N/A

0DataRank · unranked

27 citations

Jason W. Shapiro, Adriana Ene, Oleksandra Tsibere, Alan J. Wolfe, Catherine Putonti

A Thermosensitive, Phase-Variable Epigenetic Switch: pap Revisited

Microbiology and Molecular Biology Reviews(2020)10.1128/mmbr.00030-17

N/A

0DataRank · unranked

24 citations

Christine A. Ziegler, Lydia Freddolino, Alan J. Wolfe, Mario Zamora

Alan J. Wolfe

Indexed papers

Top data-sharing exemplar

Papers