Xiaoqing Yu

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 32 papers. Top paper: “RBFOX2 deregulation promotes pancreatic cancer progression and metastasis through alternative splicing”.

RBFOX2 deregulation promotes pancreatic cancer progression and metastasis through alternative splicing

Nature Communications(2023)10.1038/s41467-023-44126-w

N/A

1.1DataRank · unranked

47 citations

Mohammadreza Ranjouri, Cristina Megino‐Luque, Justin Y. Newberg, Dongliang Du, Katelyn Martin +13 more

Gain of Chromosome 1q Perturbs a Competitive Endogenous RNA Network to Promote Melanoma Metastasis

Cancer Research(2022)10.1158/0008-5472.can-22-0283

N/A

0.656DataRank · unranked

14 citations

Kaizhen Wang, Olga Vera, Akanksha Verma, Neel Jasani, Ilah Bok +5 more

Chromosome 1q amplification perturbs a ceRNA network to promote melanoma metastasis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.14.468531

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0.130DataRank · unranked

1 citations

Kaizhen Wang, Olga Vera, Akanksha Verma, Olivier Elemento, Xiaoqing Yu +2 more

The inhibitory receptor TIM-3 limits activation of the cGAS-STING pathway in intra-tumoral dendritic cells by suppressing extracellular DNA uptake

Immunity(2021)10.1016/j.immuni.2021.04.019

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0DataRank · unranked

250 citations

Kay Hänggi, Daiana P. Celias, Alycia Gardner, Jie Li, Bruna M. Batista Bittencourt +14 more

IgA transcytosis and antigen recognition govern ovarian cancer immunity

Nature(2021)10.1038/s41586-020-03144-0

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0DataRank · unranked

245 citations

Gunjan Mandal, Kyle K. Payne, Carmen M. Anadon, Chandler Gatenbee, Ricardo A. Chaurio +18 more

Single-Cell Characterization of the Immune Microenvironment of Melanoma Brain and Leptomeningeal Metastases

Clinical Cancer Research(2021)10.1158/1078-0432.ccr-21-1694

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0DataRank · unranked

166 citations

Zhihua Chen, Manali Phadke, Jiannong Li, Xiaoqing Yu, Clayton Wyatt +15 more

Macrophage-Derived Cholesterol Contributes to Therapeutic Resistance in Prostate Cancer

Cancer Research(2021)10.1158/0008-5472.can-20-4028

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0DataRank · unranked

107 citations

William Dominguez‐Viqueira, Min Liu, Shivanshu Awasthi, Julieta Abraham-Miranda, Aysenur Keske +11 more

Functional analysis of the 1p34.3 risk locus implicates GNL2 in high-grade serous ovarian cancer

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.11.020

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0DataRank · unranked

18 citations

Brett M. Reid, Ann Chen, Zhihua Chen, Ellen L. Goode, Jennifer B. Permuth +10 more

Intra-tumor heterogeneity, turnover rate and karyotype space shape susceptibility to missegregation-induced extinction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.03.466486

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0DataRank · unranked

2 citations

Richard J. Beck, Xiaoqing Yu, Thomas Veith, Samuel F. Bakhoum, Philipp M. Altrock +2 more

Tumor Expression Quantitative Trait Methylation Screening Reveals Distinct CpG Panels for Deconvolving Cancer Immune Signatures

Cancer Research(2022)10.1158/0008-5472.can-21-3113

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0DataRank · unranked

9 citations

Ling Cen, Y. Ann Chen, Joseph Markowitz, Timothy I. Shaw, Kenneth Y. Tsai +3 more

Protocol for the isolation of CD8+ tumor-infiltrating lymphocytes from human tumors and their characterization by single-cell immune profiling and multiome

STAR Protocols(2022)10.1016/j.xpro.2022.101649

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0DataRank · unranked

5 citations

Chaomei Zhang, Xuefeng Wang, Ling Cen, José R. Conejo-García, Xiaoqing Yu +1 more

Targeting intracellular oncoproteins with dimeric IgA promotes expulsion from the cytoplasm and immune-mediated control of epithelial cancers

Immunity(2023)10.1016/j.immuni.2023.09.013

N/A

0DataRank · unranked

41 citations

Gunjan Mandal, Carmen M. Anadon, Ricardo A. Chaurio, Luis Lopez‐Bailon, Mate Z. Nagy +17 more

Neoantigen-specific CD4+ tumor-infiltrating lymphocytes are potent effectors identified within adoptive cell therapy products for metastatic melanoma patients

Journal for ImmunoTherapy of Cancer(2023)10.1136/jitc-2023-007288

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0DataRank · unranked

36 citations

Jamie K. Teer, Xiaoqing Yu, Holly Branthoover, Sebastian Snedal, Madeline Rodríguez-Valentín +20 more

Combination IFNβ and Membrane-Stable CD40L Maximize Tumor Dendritic Cell Activation and Lymph Node Trafficking to Elicit Systemic T-cell Immunity

Cancer Immunology Research(2023)10.1158/2326-6066.cir-22-0927

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0DataRank · unranked

17 citations

Xiaoqing Yu, Mohammed L. Ibrahim, Dana Foresman, Mengyu Xie, Joseph Johnson +9 more

Sézary syndrome originates from heavily mutated hematopoietic progenitors

Blood Advances(2023)10.1182/bloodadvances.2022008562

N/A

0DataRank · unranked

15 citations

Kimberly B. Sprenger, Ricardo A. Chaurio, John J. Powers, Patrick Innamarato, Carmen M. Anadon +15 more

Actionable spontaneous antibody responses antagonize malignant progression in ovarian carcinoma

Gynecologic Oncology(2023)10.1016/j.ygyno.2023.03.020

N/A

0DataRank · unranked

6 citations

Sumit Mehta, Alexandra Martin, Subir Biswas, Kamira Maharaj, Mate Z. Nagy +14 more

Intra-tumor heterogeneity, turnover rate and karyotype space shape susceptibility to missegregation-induced extinction

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010815

N/A

0DataRank · unranked

10 citations

Richard J. Beck, Xiaoqing Yu, Thomas Veith, Samuel F. Bakhoum, Philipp M. Altrock +2 more

Fast all versus all genotype comparison using DNA/RNA sequencing data: method and workflow

BMC Bioinformatics(2023)10.1186/s12859-023-05288-y

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0DataRank · unranked

3 citations

Xiaoqing Yu, Jamie K. Teer, Steven A. Eschrich

Unveiling targeted cell-free DNA methylation regions through paired methylome analysis of tumor and normal tissues

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.27.546654

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0DataRank · unranked

1 citations

Krupal Patel, Xiaoqing Yu, Sijie Yao, Lei Wang, Christine H. Chung +2 more

Transgelin 2 guards T cell lipid metabolism and antitumour function

Nature(2024)10.1038/s41586-024-08071-y

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0DataRank · unranked

65 citations

Deepika Awasthi, Jeong Jieun, Tito A. Sandoval, Chang-Suk Chae, Yusibeska Ramos +20 more

Interleukin-1α release during necrotic-like cell death generates myeloid-driven immunosuppression that restricts anti-tumor immunity

Cancer Cell(2024)10.1016/j.ccell.2024.10.014

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0DataRank · unranked

59 citations

Jie Li, Achintyan Gangadharan, Xiaoxian Liu, Daiana P. Celias, Olabisi Osunmakinde +12 more

Jagged2 targeting in lung cancer activates anti-tumor immunity via Notch-induced functional reprogramming of tumor-associated macrophages

Immunity(2024)10.1016/j.immuni.2024.03.020

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0DataRank · unranked

33 citations

Rosa A. Sierra-Mondragon, Rachel V. Jimenez, Darwin Chang, Eslam Mohamed, Shiun Chang +23 more

Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

Scientific Reports(2024)10.1038/s41598-024-61758-0

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0DataRank · unranked

22 citations

Alex C. Soupir, Roberto Manjarres-Betancur, Guillermo González-Calderón, Xiaoqing Yu, Brooke L. Fridley +1 more

Histone Deacetylase Inhibitors Directly Modulate T Cell Gene Expression and Signaling and Promote Development of Effector-Exhausted T Cells in Murine Tumors

The Journal of Immunology(2024)10.4049/jimmunol.2300475

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0DataRank · unranked

17 citations

Hong Zheng, Margaret L. Barlow, Yousuf Latif, Zhihua Chen, Xiaoqing Yu +2 more

spatialGE Is a User-Friendly Web Application That Facilitates Spatial Transcriptomics Data Analysis

Cancer Research(2024)10.1158/0008-5472.can-24-2346

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0DataRank · unranked

6 citations

Roberto Manjarres-Betancur, Guillermo Gonzalez-Calderon, Alex C. Soupir, Inna Smalley, Kenneth Y. Tsai +8 more

The small MAF transcription factor MAFG co-opts MITF to promote melanoma progression

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.03.611024

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0DataRank · unranked

3 citations

Michael Martinez, Zulaida Soto-Vargas, Kaizhen Wang, Xiaonan Xu, Sara Ruiz-Buceta +16 more

Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.20.576348

N/A

0DataRank · unranked

1 citations

Alex C. Soupir, Roberto Manjarres-Betancur, Guillermo González-Calderón, Xiaoqing Yu, Brooke L. Fridley +1 more

Identifying targeted cell-free DNA methylation regions in head and neck cancer via paired methylome analysis

Research Square(2024)10.21203/rs.3.rs-5124805/v1

N/A

0DataRank · unranked

0 citations

Krupal Patel, Xiaoqing Yu, Sijie Yao, Lei Wang, Christine H. Chung +2 more

TFEB Links MYC Signaling to Epigenetic Control of Myeloid Differentiation and Acute Myeloid Leukemia

Blood Cancer Discovery(2020)10.1158/2643-3230.bcd-20-0029

N/A

0DataRank · unranked

48 citations

Nicole D. Vincelette, Xiaoqing Yu, G. Watson, Mario R. Fernandez, Chunying Yang +17 more

TAp73 mediates anti-tumor immunity through regulation of lipid metabolism in the lung tumor microenvironment

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.21.689807

N/A

0DataRank · unranked

1 citations

Vanessa Rubio, Andrew John Davis, John H. Lockhart, Nicole R. Hackel, Rachel V. Jimenez +21 more

The Association of MUC16 Mutation with Tumor Mutation Burden and Its Prognostic Implications in Cutaneous Melanoma

Cancer Epidemiology Biomarkers & Prevention(2020)10.1158/1055-9965.epi-20-0307

N/A

0DataRank · unranked

19 citations

Xiaoqing Yu, Michael Krauthammer, Willy Hugo, Chunzhe Duan, Peter A. Kanetsky +9 more

Methyltransferase inhibitors restore SATB1 protective activity against cutaneous T cell lymphoma in mice

Journal of Clinical Investigation(2020)10.1172/jci135711

N/A

0DataRank · unranked

13 citations

Jairo Pérez‐Sanz, Tara Lee Costich, Kyle K. Payne, Carmen M. Anadon, Ricardo A. Chaurio +13 more