🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Mian Umair Ahsan

Children's Hospital of Philadelphia

ORCID: 0000-0003-4725-2451

Also affiliated with Drexel University, University of Pennsylvania

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.13.380741
Top 11%
2.0DataRank
Top 11%67 citations

Justin Wagner, Jennifer McDaniel, Sarah H. Stephens, Samuel T. Westreich, Anish G. Prasanna +68 more

Papers

Driven by 13 papers — median percentile 89. Top paper: “precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions”.

precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.13.380741
Top 11%
2.0DataRank
Top 11%67 citations

Justin Wagner, Jennifer McDaniel, Sarah H. Stephens, Samuel T. Westreich, Anish G. Prasanna +68 more

A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing

Nature Communications(2024)10.1038/s41467-024-45778-y
N/A
0.709DataRank · unranked
112 citations

Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang, Mian Umair Ahsan

A survey of algorithms for the detection of genomic structural variants from long-read sequencing data

Nature Methods(2023)10.1038/s41592-023-01932-w
N/A
0.666DataRank · unranked
84 citations

Qian Liu, Jonathan E. Perdomo, Fang Li, Kai Wang, Mian Umair Ahsan

Assessing the Expression of Long INterspersed Elements (LINEs) via Long-Read Sequencing in Diverse Human Tissues and Cell Lines

Genes(2023)10.3390/genes14101893
N/A
0.373DataRank · unranked
11 citations

Mingyi Xia, Mian Umair Ahsan, Jinchuan Xing, Kai Wang, Karleena Rybacki

LongReadSum: A fast and flexible quality control and signal summarization tool for long-read sequencing data

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.01.019
N/A
0.312DataRank · unranked
7 citations

Mian Umair Ahsan, Qian Liu, Fang Li, Kai Wang, Jonathan Perdomo

A Comparative Evaluation of Computational Models for RNA modification detection using Nanopore sequencing with RNA004 Chemistry

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636352
N/A
0DataRank · unranked
6 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

Noncoding de novo mutations in SCN2A are associated with autism spectrum disorders

iScience(2025)10.1016/j.isci.2025.113258
N/A
0DataRank · unranked
0 citations

Mian Umair Ahsan, Kai Wang, Yuan Zhang

Detection and characterization of neonatal cytomegalovirus through nanopore sequencing using flongle flow cells: Pilot study in Philadelphia, Pennsylvania

Journal of Virological Methods(2025)10.1016/j.jviromet.2025.115245
N/A
0DataRank · unranked
0 citations

Joe Chan, Gabrielle C Galchen, Mian Umair Ahsan, Robert H. Gilman, Kenneth P. Smith +3 more

PhenoGPT2: A Multimodal Fine-tuned Large Language Models for Phenotype Extraction and Normalization from Clinical Text and Facial Images

(2025)10.1145/3765612.3767763
N/A
0DataRank · unranked
0 citations

Mian Umair Ahsan, Zhanliang Wang, Kai Wang, Quan Minh Nguyen

NanoCaller for accurate detection of SNPs and indels in difficult-to-map regions from long-read sequencing by haplotype-aware deep neural networks

Genome biology(2021)10.1186/s13059-021-02472-2
N/A
0DataRank · unranked
94 citations

Qian Liu, Fang Li, Kai Wang, Mian Umair Ahsan

Noncoding de novo mutations in SCN2A are associated with autism spectrum disorders

medRxiv(2024)10.1101/2024.05.05.24306908
N/A
0DataRank · unranked
1 citations

Mian Umair Ahsan, Kai Wang, Yuan Zhang

A comparative evaluation of computational models for RNA modification detection using nanopore sequencing with RNA004 chemistry

Briefings in Bioinformatics(2025)10.1093/bib/bbaf404
N/A
0DataRank · unranked
26 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

Combining panel-based and whole-transcriptome-based gene fusion detection by long-read sequencing

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101111
N/A
0DataRank · unranked
1 citations

Xu Feng, Hannah M. Deutsch, Mian Umair Ahsan, Joe Chan, Zizhuo Liang +4 more