Lindsay Kalan

MedicineHealth Professions

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “vRhyme enables binning of viral genomes from metagenomes”.

vRhyme enables binning of viral genomes from metagenomes

Nucleic Acids Research(2022)10.1093/nar/gkac341

N/A

0.721DataRank · unranked

121 citations

Alyssa Adams, Rauf Salamzade, Lindsay Kalan, Karthik Anantharaman, Kristopher Kieft

Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC

Microbial Genomics(2023)10.1099/mgen.0.000988

N/A

0.557DataRank · unranked

40 citations

Jonathan Cheong, Shelby Sandstrom, Mary Hannah Swaney, Reed M. Stubbendieck, Nicole Lane Starr +4 more

zol and fai: large-scale targeted detection and evolutionary investigation of gene clusters

Nucleic Acids Research(2025)10.1093/nar/gkaf045

N/A

0.522DataRank · unranked

13 citations

Patricia Q. Tran, Cody Martin, Abigail L. Manson, Michael S. Gilmore, Ashlee M. Earl +3 more

Skin mycobiota-mediated antagonism against Staphylococcus aureus through a modified fatty acid

Current Biology(2025)10.1016/j.cub.2025.03.055

N/A

0.464DataRank · unranked

12 citations

Uyen Thy Nguyen, Susannah Lawhorn, T. Jarrod Smith, Rebecca M. Corrigan, Won Se Suh +3 more

Upper respiratory microbial communities of healthy populations are shaped by niche and age

Microbiome(2024)10.1186/s40168-024-01940-8

N/A

0.460DataRank · unranked

13 citations

Mary Hannah Swaney, Shelby Sandstrom, Timothy C. Davenport, Christine M. Seroogy, James E. Gern +3 more

Robbing Peter to Pay Paul: Chlorhexidine gluconate demonstrates short‐term efficacy and long‐term cytotoxicity

Wound Repair and Regeneration(2022)10.1111/wrr.13044

N/A

0.406DataRank · unranked

14 citations

Aiping Liu, Clayton J. Rust, Collin L. Tran, Sameeha E Hassan, Lindsay Kalan +2 more

Sweat and Sebum Preferences of the Human Skin Microbiota

Microbiology Spectrum(2023)10.1128/spectrum.04180-22

N/A

0DataRank · unranked

88 citations

Amanda Nelsen, Shelby Sandstrom, Lindsay Kalan, Mary Hannah Swaney

The dynamic balance of the skin microbiome across the lifespan

Biochemical Society Transactions(2023)10.1042/bst20220216

N/A

0DataRank · unranked

66 citations

Lindsay Kalan, Elizabeth C. Townsend

skDER & CiDDER: two scalable approaches for microbial genome dereplication

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.27.559801

N/A

0DataRank · unranked

4 citations

Aamuktha Kottapalli, Lindsay Kalan, Rauf Salamzade

What is slough? Defining the proteomic and microbial composition of slough and its implications for wound healing

Wound Repair and Regeneration(2024)10.1111/wrr.13170

N/A

0DataRank · unranked

17 citations

Jonathan Cheong, Michael Radzietza, Blaine Gabriel Fritz, Matthew Malone, Thomas Bjarnsholt +6 more

Key aspects of papillomavirus infection influence the host cervicovaginal microbiome in a preclinical murine papillomavirus (MmuPV1) infection model

mBio(2024)10.1128/mbio.00933-24

N/A

0DataRank · unranked

8 citations

Elizabeth C. Townsend, Simon Blaine‐Sauer, Stephanie M. McGregor, Mark Horswill, Johan A. den Boon +4 more

The porcine skin microbiome exhibits broad fungal antagonism

Fungal Genetics and Biology(2024)10.1016/j.fgb.2024.103898

N/A

0DataRank · unranked

7 citations

Elizabeth C. Townsend, Jonathan Cheong, Rauf Salamzade, Aiping Liu, Shelby Sandstrom +9 more

Skin-associated Corynebacterium amycolatum shares cobamides

mSphere(2024)10.1128/msphere.00606-24

N/A

0DataRank · unranked

3 citations

N. Henriquez, Tayte Campbell, Jo Handelsman, Lindsay Kalan, Mary Hannah Swaney

Micromonosporaceae biosynthetic gene cluster diversity highlights the need for broad-spectrum investigations

Microbial Genomics(2024)10.1099/mgen.0.001167

N/A

0DataRank · unranked

3 citations

Doug R. Braun, Spencer S. Ericksen, Rauf Salamzade, Lindsay Kalan, Scott R. Rajski +2 more

Upper respiratory microbial communities of healthy populations are shaped by niche and age

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.14.589416

N/A

0DataRank · unranked

1 citations

Mary Hannah Swaney, Shelby Sandstrom, Timothy C. Davenport, Christine M. Seroogy, James E. Gern +3 more

The Porcine Skin Microbiome Exhibits Broad Fungal Antagonism

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.12.574414

N/A

0DataRank · unranked

0 citations

Elizabeth C. Townsend, JZ Alex Cheong, Rauf Salamzade, Aiping Liu, Shelby Sandstrom +9 more

Establishing an ex vivo porcine skin model to investigate the effects of broad-spectrum antiseptic on viable skin microbial communities

mSphere(2025)10.1128/msphere.00441-25

N/A

0DataRank · unranked

2 citations

Kui Xu, Karinda De La Cruz, Lusheng Huang, Shelby Sandstrom, Jennifer J. Meudt +5 more

Candida auris Forms High-Burden Biofilms in Skin Niche Conditions and on Porcine Skin

mSphere(2020)10.1128/msphere.00910-19

N/A

0DataRank · unranked

155 citations

Chad Johnson, John F. Kernien, Tarika D. Patel, Brandon C. Lam, Jonathan Cheong +5 more

Skin Sentinels: Defensive Effector Molecules Produced by the Skin Microbiome

Current Clinical Microbiology Reports(2025)10.1007/s40588-025-00256-x

N/A

0DataRank · unranked

0 citations

Lindsay Kalan, Owen D. McArthur

Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.27.267492

N/A

0DataRank · unranked

3 citations

Chad Johnson, Hanxiao Wan, Aiping Liu, John F. Kernien, Angela Gibson +3 more

Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms

The ISME Journal(2021)10.1038/s41396-021-00901-5

N/A

0DataRank · unranked

57 citations

Chad Johnson, Hanxiao Wan, Aiping Liu, John F. Kernien, Angela Gibson +3 more

Forgotten fungi: the importance of the skin mycobiome

Current Opinion in Microbiology(2022)10.1016/j.mib.2022.102235

N/A

0DataRank · unranked

51 citations

Lindsay Kalan, Uyen Thy Nguyen

Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsa BGC

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.20.488953

N/A

0DataRank · unranked

4 citations

Jonathan Cheong, Shelby Sandstrom, Mary Hannah Swaney, Reed M. Stubbendieck, Nicole Lane Starr +4 more

Comparative genomic and metagenomic investigations of the Corynebacterium tuberculostearicum species complex reveals potential mechanisms underlying associations to skin health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.31.506047

N/A

0DataRank · unranked

2 citations

Mary Hannah Swaney, Lindsay Kalan, Rauf Salamzade