🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xinyi Zhang

Berkeley College

ORCID: 0000-0003-4996-4698

Also affiliated with Austrian Research Institute for Artificial Intelligence, China Agricultural University, University of California, Berkeley

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 9 papers. Top paper: “N-acetylcysteine remodels the tumor microenvironment of primary and recurrent mouse glioblastoma”.

N-acetylcysteine remodels the tumor microenvironment of primary and recurrent mouse glioblastoma

Journal of Neuro-Oncology(2025)10.1007/s11060-025-04971-9
N/A
0.165DataRank · unranked
2 citations

Fanen Yuan, Qian Sun, Chen Yang, Hongxiang Jiang, Xi Xiang +6 more

Graph-based autoencoder integrates spatial transcriptomics with chromatin images and identifies joint biomarkers for Alzheimer’s disease

Nature Communications(2022)10.1038/s41467-022-35233-1
N/A
0DataRank · unranked
70 citations

Xiao Wang, G. V. Shivashankar, Caroline Uhler, Xinyi Zhang

Phototoxic effects of nonlinear optical microscopy on cell cycle, oxidative states, and gene expression

Scientific Reports(2022)10.1038/s41598-022-23054-7
N/A
0DataRank · unranked
21 citations

Gabriel Dorlhiac, Markita P. Landry, Aaron Streets, Xinyi Zhang

Unsupervised representation learning of chromatin images identifies changes in cell state and tissue organization in DCIS

Nature Communications(2024)10.1038/s41467-024-50285-1
N/A
0DataRank · unranked
12 citations

Saradha Venkatachalapathy, Daniel Paysan, Paulina Schaerer, Claudio Tripodo, Caroline Uhler +2 more

Multimodal measurements of phototoxicity in nonlinear optical microscopy

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.27.457929
N/A
0DataRank · unranked
2 citations

Gabriel Dorlhiac, Markita P. Landry, Aaron Streets, Xinyi Zhang

Prediction of protein subcellular localization in single cells

Nature Methods(2025)10.1038/s41592-025-02696-1
N/A
0DataRank · unranked
19 citations

Yitong Tseo, Yunhao Bai, Fei Chen, Caroline Uhler, Xinyi Zhang

A Representation Fusion Framework for Decoupling Diagnostic Information in Multimodal Learning

npj Digital Medicine(2025)10.1038/s41746-025-02144-6
N/A
0DataRank · unranked
2 citations

Sam Friedman, Xinyi Zhang, Mahnaz Maddah, Caroline Uhler, Sana Tonekaboni

Image2Reg: Linking chromatin images to gene regulation using genetic and chemical perturbation screens

Cell Systems(2025)10.1016/j.cels.2025.101293
N/A
0DataRank · unranked
0 citations

Adityanarayanan Radhakrishnan, Xinyi Zhang, G V Shivashankar, Caroline Uhler, Daniel Paysan

An Information Criterion for Controlled Disentanglement of Multimodal Data

arXiv (Cornell University)(2024)10.48550/arxiv.2410.23996
N/A
0DataRank · unranked
0 citations

Sharut Gupta, Xinyi Zhang, Sana Tonekaboni, Stefanie Jegelka, Tommi Jaakkola +2 more