Jagdish Suresh Patel

Also affiliated with Campbell Collaboration

Biochemistry, Genetics and Molecular BiologyNeuroscienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Assessment of software methods for estimating protein-protein relative binding affinities”.

Assessment of software methods for estimating protein-protein relative binding affinities

PLoS ONE(2020)10.1371/journal.pone.0240573

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0DataRank · unranked

20 citations

Kyle Martin, Jonathan E. Barnes, Jagdish Suresh Patel, F. Marty Ytreberg, Tawny R. Gonzalez

Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance

PLoS Computational Biology(2020)10.1371/journal.pcbi.1008212

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10 citations

Jonathan E. Barnes, Wayne I. L. Davies, Deborah L. Stenkamp, Jagdish Suresh Patel, Dharmeshkumar Patel

Predicting the viability of beta-lactamase: How folding and binding free energies correlate with beta-lactamase fitness

PLoS ONE(2020)10.1371/journal.pone.0233509

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31 citations

Nandita Naik, Jagdish Suresh Patel, C. Scott Wylie, Wenze Gu, Jessie Huang +5 more

EfgA is a conserved formaldehyde sensor that halts bacterial translation in response to elevated formaldehyde

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.16.343392

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6 citations

Dipti D. Nayak, Tomislav Ticak, M.G. Davlieva, Jessica A. Lee, Leah B. Lambert +8 more

Nuku, a family of primate retrogenes derived from KU70

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.02.408492

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0 citations

Aisha Ellahi, Kyudong Han, Jagdish Suresh Patel, Sara L. Sawyer, Paul A. Rowley

The pesticide chlorpyrifos promotes obesity by inhibiting diet-induced thermogenesis in brown adipose tissue

Nature Communications(2021)10.1038/s41467-021-25384-y

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0DataRank · unranked

85 citations

Evangelia E. Tsakiridis, Shuman Zhang, Andrea Llanos, Eric M. Desjardins, Julian M. Yabut +15 more

EfgA is a conserved formaldehyde sensor that leads to bacterial growth arrest in response to elevated formaldehyde

PLoS Biology(2021)10.1371/journal.pbio.3001208

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35 citations

Dipti D. Nayak, Tomislav Ticak, M.G. Davlieva, Jessica A. Lee, Chandler N. Hellenbrand +9 more

Targeting SUMOylation dependency in human cancer stem cells through a unique SAE2 motif revealed by chemical genomics

Cell chemical biology(2021)10.1016/j.chembiol.2021.04.014

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0DataRank · unranked

20 citations

Ryan R. Mitchell, Wenliang Wang, Luca Orlando, Allison L. Boyd, Borko Tanasijevic +22 more

Nuku, a family of primate retrocopies derived from KU70

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab163

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2 citations

Aisha Ellahi, Kyudong Han, Jagdish Suresh Patel, James T. Van Leuven, Sara L. Sawyer +1 more

Paired Simulations and Experimental Investigations into the Calcium-Dependent Conformation of Albumin

Journal of Chemical Information and Modeling(2022)10.1021/acs.jcim.1c01104

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17 citations

Stephanie L. Haag, Jagdish Suresh Patel, F. Marty Ytreberg, Matthew T. Bernards, Dharmeshkumar Patel

Molecular Modeling Predicts Novel Antibody Escape Mutations in the Respiratory Syncytial Virus Fusion Glycoprotein

Journal of Virology(2022)10.1128/jvi.00353-22

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17 citations

McKenna A. Hull, F. Marty Ytreberg, Jagdish Suresh Patel, Tanya A. Miura, Sierra S. Beach

The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6

Scientific Reports(2022)10.1038/s41598-022-23482-5

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14 citations

Peik K. Lund-Andersen, Jagdish Suresh Patel, F. Marty Ytreberg, Jonathan E. Barnes

An EvoDevo Study of Salmonid Visual Opsin Dynamics and Photopigment Spectral Sensitivity

Frontiers in Neuroanatomy(2022)10.3389/fnana.2022.945344

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10 citations

Wayne Iwan Lee Davies, Dharmeshkumar Patel, Jonathan E. Barnes, Rita Karlsen, Jessica K. Mountford +4 more

Defining the HIV Capsid Binding Site of Nucleoporin 153

mSphere(2022)10.1128/msphere.00310-22

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7 citations

Jagdish Suresh Patel, Jordan Yang, Angela Crabtree, Brenda M. Rubenstein, Peik K. Lund-Andersen +3 more

A Novel Virus Discovered in the Yeast Pichia membranifaciens

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.05.475065

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5 citations

Jack W. Creagh, Lance R. Fredericks, Angela Crabtree, Jagdish Suresh Patel, Paul A. Rowley +1 more

Defining the HIV Capsid Binding Site of Nucleoporin 153

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.06.490988

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0DataRank · unranked

0 citations

Jagdish Suresh Patel, Jordan Yang, Angela Crabtree, Brenda M. Rubenstein, Peik K. Lund-Andersen +3 more

The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6

Research Square(2022)10.21203/rs.3.rs-1836170/v1

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0DataRank · unranked

0 citations

Peik K. Lund, Jagdish Suresh Patel, F. Marty Ytreberg, Jonathan E. Barnes

Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stability

BMC Bioinformatics(2023)10.1186/s12859-023-05537-0

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29 citations

Jagdish Suresh Patel, F. Marty Ytreberg, Craig R. Miller, Yesol Sapozhnikov

Human Milk Protein-Derived Bioactive Peptides from In Vitro-Digested Colostrum Exert Antimicrobial Activities against Common Neonatal Pathogens

Nutrients(2024)10.3390/nu16132040

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15 citations

Bum Jin Kim, Jagdish Suresh Patel, David C. Dallas, Yimin Chen, Yang Lyu

Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data

Scientific Reports(2024)10.1038/s41598-024-72491-z

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0DataRank · unranked

9 citations

Jonathan E. Barnes, Jagdish Suresh Patel, F. Marty Ytreberg, L. América

Enhanced catabolism of glycine betaine and derivatives provides improved osmotic stress protection in Methylorubrum extorquens PA1

Applied and Environmental Microbiology(2024)10.1128/aem.00310-24

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2 citations

Zachary T. Hying, Deepanshu Singla, Noel Suarez Reyes, Shubham Kumar Pandey, Jagdish Suresh Patel +2 more

Deep-sea fish reveal alternative pathway for vertebrate visual development

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.10.617579

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5 citations

Stamatina Isari, Jonathan E. Barnes, Jagdish Suresh Patel, N. Justin Marshall, Walter Salzburger +3 more

Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.22.595230

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0DataRank · unranked

1 citations

Jonathan E. Barnes, Jagdish Suresh Patel, F. Marty Ytreberg, L. América

The Saccharomyces killer toxin K62 is a protein of the aerolysin family

mBio(2025)10.1128/mbio.01425-25

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0DataRank · unranked

1 citations

Michael Rolfsmeier, Kasen J. Evans, Rodolfo Bizarria, David C. Reetz, Tanner J. Badigian +11 more

The identification of a novel interaction site for the human immunodeficiency virus capsid on nucleoporin 153

Journal of General Virology(2025)10.1099/jgv.0.002104

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0DataRank · unranked

0 citations

Peik K. Lund-Andersen, Szu‐Huan Wang, F. Marty Ytreberg, Mandar T. Naik, Jagdish Suresh Patel +2 more