Bo Shopsin

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 44 papers. Top paper: “Altered Immunity of Laboratory Mice in the Natural Environment Is Associated with Fungal Colonization”.

Altered Immunity of Laboratory Mice in the Natural Environment Is Associated with Fungal Colonization

Cell Host & Microbe(2020)10.1016/j.chom.2020.02.015

N/A

4.6DataRank · unranked

171 citations

Ying-Han Chen, Jian-Da Lin, Jacqueline M. Leung, Caroline McCauley, Joseph C. Devlin +12 more

Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

eLife(2023)10.7554/elife.89098

N/A

0.899DataRank · unranked

35 citations

Andrew I. Perault, Gregory Putzel, Andrew W. Pountain, Ji‐Sun Kim, Ashley Dumont +21 more

Microbial signatures in the lower airways of mechanically ventilated COVID-19 patients associated with poor clinical outcome

Nature Microbiology(2021)10.1038/s41564-021-00961-5

N/A

0.792DataRank · unranked

196 citations

Matthew Chung, Luis F. Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung +47 more

Gut microbiome dysbiosis in antibiotic-treated COVID-19 patients is associated with microbial translocation and bacteremia

Nature Communications(2022)10.1038/s41467-022-33395-6

N/A

0.791DataRank · unranked

194 citations

Mericien Venzon, Jon Klein, Jordan E. Axelrad, Chenzhen Zhang, Alexis Sullivan +81 more

Antimicrobial overproduction sustains intestinal inflammation by inhibiting Enterococcus colonization

Cell Host & Microbe(2023)10.1016/j.chom.2023.08.002

N/A

0.626DataRank · unranked

64 citations

T. G. Heaney, Mariya London, Yi Ding, Gregory Putzel, Frank Yeung +16 more

Transcription–replication interactions reveal bacterial genome regulation

Nature(2024)10.1038/s41586-023-06974-w

N/A

0.590DataRank · unranked

50 citations

Peien Jiang, Tianyou Yao, Ehsan Homaee, Yichao Guan, K McDonald +6 more

Pathogen Species Is Associated With Mortality in Nosocomial Bloodstream Infection in Patients With COVID-19

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac083

N/A

0.551DataRank · unranked

10 citations

Thomas D. Filardo, Sarah Conderino, Samuel J. Magaziner, Yanina Dubrovskaya, Kenneth Inglima +10 more

Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome

medRxiv(2021)10.1101/2021.02.23.21252221

N/A

0.457DataRank · unranked

20 citations

Matthew Chung, Luis F. Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung +47 more

Diversity of Functionally Distinct Clonal Sets of Human Conventional Memory B Cells That Bind Staphylococcal Protein A

Frontiers in Immunology(2021)10.3389/fimmu.2021.662782

N/A

0.360DataRank · unranked

10 citations

Li Zhi, David N. Hernandez, Hanane El Bannoudi, Sergei L. Kosakovsky Pond, Bo Shopsin +4 more

Staphylococcus aureus senses human neutrophils via PerR to coordinate the expression of the toxin LukAB

Infection and Immunity(2024)10.1128/iai.00526-23

N/A

0.360DataRank · unranked

10 citations

Exene Erin Anderson, Sophie Dyzenhaus, Magdalena Podkowik, Bo Shopsin, Alejandro Pironti +2 more

ACE2-containing defensosomes serve as decoys to inhibit SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.17.473223

N/A

0.312DataRank · unranked

7 citations

Maren de Vries, Juan Gago, Kristen Dancel-Manning, Joseph Sall, William J. Rice +9 more

Collagen binding adhesin restricts Staphylococcus aureus skin infection

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.01.621145

N/A

0.292DataRank · unranked

6 citations

Brady L. Spencer, Jakub Kwieciński, Magdalena Podkowik, Gregory Putzel, Alejandro Pironti +4 more

Prophage-encoded methyltransferase drives adaptation of community-acquired methicillin-resistant Staphylococcus aureus

Journal of Clinical Investigation(2025)10.1172/jci177872

N/A

0.269DataRank · unranked

5 citations

Magdalena Podkowik, Rebecca Tierce, Irnov Irnov, Gregory Putzel, Nora M. Samhadaneh +14 more

Enterobacter hormaechei replaces virulence with carbapenem resistance via porin loss

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2414315122

N/A

0.269DataRank · unranked

5 citations

Amelia St. John, Ashley Dumont, Bo Shopsin, Alejandro Pironti, Victor J. Torres +1 more

Inferring asymptomatic carriers of antimicrobial-resistant organisms in hospitals using genomic, microbiological and patient mobility data

Nature Communications(2025)10.1038/s41467-025-65241-w

N/A

0.241DataRank · unranked

4 citations

Dwayne Seeram, Seth Blumberg, Bo Shopsin, Anne‐Catrin Uhlemann, Jeffrey Shaman +1 more

Prophage-encoded methyltransferase drives adaptation of community-acquired methicillin-resistant Staphylococcus aureus

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.17.589803

N/A

0.217DataRank · unranked

3 citations

Magdalena Podkowik, Rebecca Tierce, Irnov Irnov, Gregory Putzel, Nora M. Samhadaneh +14 more

Splenic marginal zone CD169+ macrophages are critical for regulating host response to Staphylococcus aureus infection 3196

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.1023

N/A

0.104DataRank · unranked

1 citations

K A Kamal, Stephen T. Yeung, Ashira Lubkin, Keenan A. Lacey, Victor J. Torres +3 more

Microbiota and metabolic adaptation shape Staphylococcus aureus virulence and antimicrobial resistance during intestinal colonization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.11.593044

N/A

0DataRank · unranked

8 citations

Miranda Pawline, Alejandro Pironti, Sabrina M. Morales, Andrew I. Perault, Robert J. Ulrich +14 more

Sex-dependent gastrointestinal colonization resistance to MRSA is microbiota and Th17 dependent

eLife(2024)10.7554/elife.101606

N/A

0DataRank · unranked

6 citations

Chunyi Zhou, Defne Ercelen, Gregory Putzel, Xiaomin Yao, Alyson R Guy +7 more

Author Response: Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

(2024)10.7554/elife.89098.3.sa3

N/A

0DataRank · unranked

0 citations

Andrew I. Perault, Gregory Putzel, Andrew W. Pountain, Jisun Kim, Ashley Dumont +21 more

Sex-dependent gastrointestinal colonization resistance to MRSA is microbiota and Th17 dependent

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.17.603994

N/A

0DataRank · unranked

0 citations

Chunyi Zhou, Defne Ercelen, Gregory Putzel, Xiaomin Yao, Alyson R Guy +7 more

Reviewer #2 (Public review): Sex-dependent gastrointestinal colonization resistance to MRSA is microbiome and Th17 dependent

(2024)10.7554/elife.101606.1.sa2

N/A

0DataRank · unranked

0 citations

Chunyi Zhou, Defne Ercelen, Gregory Putzel, Xiaomin Yao, Alyson R Guy +7 more

Heterozygosity for Crohn’s disease risk allele of ATG16L1 promotes unique protein interactions and protects against bacterial infection

Immunity(2025)10.1016/j.immuni.2025.04.023

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0DataRank · unranked

7 citations

Eugene Rudensky, Patricia Martin, Brittany Miller, Isabel Vargas, Erin E. Zwack +8 more

Reviewer #1 (Public review): Sex-dependent gastrointestinal colonization resistance to MRSA is microbiota and Th17 dependent

(2025)10.7554/elife.101606.2.sa2

N/A

0DataRank · unranked

0 citations

Chunyi Zhou, Defne Ercelen, Gregory Putzel, Xiaomin Yao, Alyson R Guy +7 more

Sex-dependent gastrointestinal colonization resistance to MRSA is microbiota and Th17 dependent

eLife(2025)10.7554/elife.101606.3

N/A

0DataRank · unranked

0 citations

Chunyi Zhou, Defne Ercelen, Gregory Putzel, Xiaomin Yao, Alyson R Guy +7 more

Gastrointestinal colonization as a source of Staphylococcus aureus in atopic dermatitis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.17.648849

N/A

0DataRank · unranked

0 citations

Gregory Putzel, Magdalena Podkowik, Julia Shenderovich, Alice Tillman, Sabrina M. Morales +17 more

Cell targeting by the bicomponent leukocidin subunit HlgB drives Staphylococcus aureus pathophysiology

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110592

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0DataRank · unranked

0 citations

Rachel A. Prescott, Hee Jin Kim, Chrispin Chaguza, Sandra González, Juliana K. Ilmain +4 more

CRISPR-Cas–associated SCC mec Variants in Methicillin-resistant Staphylococcus aureus Evade Rapid Diagnostic Detection

The Journal of Infectious Diseases(2025)10.1093/infdis/jiaf575

N/A

0DataRank · unranked

0 citations

Alice Tillman, Courtney Takats, Héloïse Carion, Gregory Putzel, Julian McWilliams +11 more

Convergent Evolution of Neutralizing Antibodies to Staphylococcus aureus γ-Hemolysin C That Recognize an Immunodominant Primary Sequence-Dependent B-Cell Epitope

mBio(2020)10.1128/mbio.00460-20

N/A

0DataRank · unranked

10 citations

Kayan Tam, Bo Shopsin, Emily E. Radke, Karen Law, Timothy Cardozo +3 more

Unbiased Identification of Immunogenic Staphylococcus aureus Leukotoxin B-Cell Epitopes

Infection and Immunity(2020)10.1128/iai.00785-19

N/A

0DataRank · unranked

8 citations

Kayan Tam, Bo Shopsin, Emily E. Radke, Pegah Kolahi, Richard Copin +5 more

Gut microbiome dysbiosis during COVID-19 is associated with increased risk for bacteremia and microbial translocation.

Research Square(2021)10.21203/rs.3.rs-726620/v1

N/A

0DataRank · unranked

43 citations

Lucie Bernard, Jon Klein, Jordan E. Axelrad, Grant Hussey, Alexis Sullivan +16 more

Gut microbiome dysbiosis during COVID-19 is associated with increased risk for bacteremia and microbial translocation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.15.452246

N/A

0DataRank · unranked

15 citations

Lucie Bernard, Jon Klein, Jordan E. Axelrad, Chenzhen Zhang, Grant Hussey +19 more

ACE2-containing defensosomes serve as decoys to inhibit SARS-CoV-2 infection

PLoS Biology(2022)10.1371/journal.pbio.3001754

N/A

0DataRank · unranked

30 citations

Maren de Vries, Juan Gago, Kristen Dancel-Manning, Joseph Sall, William J. Rice +11 more

Transcription-replication interactions reveal principles of bacterial genome regulation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.22.513359

N/A

0DataRank · unranked

9 citations

Peien Jiang, Tianyou Yao, Ehsan Homaee, Yichao Guan, Magdalena Podkowik +5 more

MRSA lineage USA300 isolated from bloodstream infections exhibit altered virulence regulation

Cell Host & Microbe(2023)10.1016/j.chom.2022.12.003

N/A

0DataRank · unranked

43 citations

Mitchell J. Sullivan, Bremy Alburquerque, Daiane Boff, Adriana van de Guchte, Marilyn Chung +12 more

Capsular Polysaccharide Is Essential for the Virulence of the Antimicrobial-Resistant Pathogen Enterobacter hormaechei

mBio(2023)10.1128/mbio.02590-22

N/A

0DataRank · unranked

23 citations

Andrew I. Perault, Sabrina I. Giacometti, Alexis G. Sommerfield, Ashley Dumont, Keenan A. Lacey +15 more

Bacterial contact induces polar plug disintegration to mediate whipworm egg hatching

PLoS Pathogens(2023)10.1371/journal.ppat.1011647

N/A

0DataRank · unranked

15 citations

Joseph Sall, Mericien Venzon, Janet J. Olivas, Xuhui Zheng, Michael Cammer +11 more

Priorities and Progress in Gram-positive Bacterial Infection Research by the Antibacterial Resistance Leadership Group: A Narrative Review

Clinical Infectious Diseases(2023)10.1093/cid/ciad565

N/A

0DataRank · unranked

6 citations

César A. Arias, Deena R. Altman, Ahmed Babiker, Helen W. Boucher, C. Buddy Creech +40 more

Transcription-replication interactions reveal principles of bacterial genome regulation

Research Square(2023)10.21203/rs.3.rs-2724389/v1

N/A

0DataRank · unranked

2 citations

Andrew W. Pountain, Peien Jiang, Tianyou Yao, Ehsan Homaee, Yichao Guan +5 more

Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.08.544038

N/A

0DataRank · unranked

2 citations

Andrew I. Perault, Gregory Putzel, Andrew W. Pountain, Jisun Kim, Ashley Dumont +21 more

Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

(2023)10.7554/elife.89098.1

N/A

0DataRank · unranked

1 citations

Andrew I. Perault, Gregory Putzel, Andrew W. Pountain, Ji‐Sun Kim, Ashley Dumont +21 more

Reviewer #2 (Public Review): Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

(2023)10.7554/elife.89098.1.sa0

N/A

0DataRank · unranked

0 citations

Andrew I. Perault, Gregory Putzel, Andrew Pountain, Jisun Kim, Ashley Dumont +21 more

Reviewer #1 (Public Review): Quorum-sensing agr system of Staphylococcus aureus primes gene expression for protection from lethal oxidative stress

(2023)10.7554/elife.89098.1.sa1

N/A

0DataRank · unranked

0 citations

Andrew I. Perault, Gregory Putzel, Andrew Pountain, Jisun Kim, Ashley Dumont +21 more

SARS-CoV-2 infection predisposes patients to coinfection with Staphylococcus aureus

mBio(2024)10.1128/mbio.01667-24

N/A

0DataRank · unranked

15 citations

Lucie Bernard, Ashley Dumont, Ana Mayela Valero Jimenez, Gregory Putzel, Juan Gago +32 more