🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Doron Lipson

Arima Genomics (United States)

ORCID: 0009-0004-2738-5702

Also affiliated with ID Genomics (United States), Genomics (United Kingdom), Rosetta Genomics (Israel)

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.735Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

Scientific Data(2025)10.1038/s41597-025-05438-2
Top 44%
0.421DataRank
Top 44%10 citations

Vaidehi Patel, Nathan D. Olson, Hua‐Jun He, Anthony Schmitt, Kenneth D. Cole +80 more

Papers

Driven by 12 papers — median percentile 51. Top paper: “Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing”.

Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing

Nature Biotechnology(2022)10.1038/s41587-022-01452-6
N/A
0.598DataRank · unranked
53 citations

Gila Lithwick‐Yanai, Xian Adiconis, Florian C. Oberstrass, Nika Iremadze, Kathryn Geiger-Schuller +9 more

Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.29.576933
N/A
0.470DataRank · unranked
22 citations

Rahul Satija, Efthymia Papalexi, Isabella Mascio, Hans‐Hermann Wessels, Huiyoung Yun +5 more

Global loss of promoter–enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis

Nature Cancer(2024)10.1038/s43018-024-00823-z
N/A
0.457DataRank · unranked
20 citations

Hayan Lee, Shannon White, Annika K. Weimer, Emma Monte, Aaron M. Horning +21 more

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

Scientific Data(2025)10.1038/s41597-025-05438-2
Top 44%
0.421DataRank
Top 44%10 citations

Vaidehi Patel, Nathan D. Olson, Hua‐Jun He, Anthony Schmitt, Kenneth D. Cole +80 more

Single cell RNA-seq by mostly-natural sequencing by synthesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.29.493705
N/A
0.399DataRank · unranked
1 citations

Gila Lithwick-Yanai, Xian Adiconis, Florian Oberstrass, Nika Iremadze, Kathryn Geiger-Schuller +11 more

Whole genome error-corrected sequencing for sensitive circulating tumor DNA cancer monitoring

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.17.516904
N/A
0.345DataRank · unranked
9 citations

Adam J. Widman, Anushri Arora, Itai Rusinek, William F. Hooper, Rebecca L. Murray +30 more

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.18.613544
Top 54%
0.314DataRank
Top 54%6 citations

Vaidehi Patel, Nathan D. Olson, Hua‐Jun He, Kenneth D. Cole, Alexander A. Gooden +78 more

An automated ATAC-seq method reveals sequence determinants of transcription factor dose response in the open chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.24.666684
N/A
0.104DataRank · unranked
1 citations

Masaru Shimasawa, Sidney Y. Vermeulen, Samuel H. Kim, Nika Iremadze, Doron Lipson +3 more

Global loss of promoter-enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.26.505505
N/A
0DataRank · unranked
1 citations

Hayan Lee, Shannon White, Annika K. Weimer, Emma Monte, Aaron Horning +21 more

Global loss of fine-scale chromatin architecture and rebalancing of gene expression during early colorectal cancer development

Research Square(2022)10.21203/rs.3.rs-2003187/v1
N/A
0DataRank · unranked
0 citations

Yizhou Zhu, Hayan Lee, Annika K. Weimer, Aaron M. Horning, Stephanie Nevins +17 more

Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens

Nature Cell Biology(2025)10.1038/s41556-025-01622-z
N/A
0DataRank · unranked
29 citations

Carol Dalgarno, Efthymia Papalexi, Isabella Mascio, Hans‐Hermann Wessels, Huiyoung Yun +5 more

Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.16.473013
N/A
0DataRank · unranked
79 citations

Reuben A. Saunders, Angela N. Pogson, Jeffrey A. Hussmann, Alexander LeNail, Alina Guna +12 more