Natalie Stanley

University of North Carolina at Chapel Hill

Also affiliated with Tennessee Department of Health, Stanford University

Biochemistry, Genetics and Molecular BiologyPhysics and AstronomyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 36 papers. Top paper: “Integrated trajectories of the maternal metabolome, proteome, and immunome predict labor onset”.

Integrated trajectories of the maternal metabolome, proteome, and immunome predict labor onset

Science Translational Medicine(2021)10.1126/scitranslmed.abd9898

N/A

3.1DataRank · unranked

147 citations

Mohammad Sajjad Ghaemi, Xiaoyuan Han, Kazuo Ando, Julien Hédou, Dorien Feyaerts +33 more

Preferential inhibition of adaptive immune system dynamics by glucocorticoids in patients after acute surgical trauma

Nature Communications(2020)10.1038/s41467-020-17565-y

N/A

0.945DataRank · unranked

41 citations

Natalie Stanley, Viktoria Lindberg-Larsen, Jakob Einhaus, Amy S. Tsai, Franck Verdonk +13 more

Multiomics Characterization of Preterm Birth in Low- and Middle-Income Countries

JAMA Network Open(2020)10.1001/jamanetworkopen.2020.29655

N/A

0.704DataRank · unranked

108 citations

Sunil Sazawal, Abdullah H Baqui, Muhammad Imran Nisar, Usha Dhingra, Rasheda Khanam +73 more

Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions

Nature Machine Intelligence(2020)10.1038/s42256-020-00232-8

N/A

0.670DataRank · unranked

86 citations

Amy S. Tsai, Natalie Stanley, Martin Becker, Mohammad Sajjad Ghaemi, David R. McIlwain +26 more

Early prediction and longitudinal modeling of preeclampsia from multiomics

Patterns(2022)10.1016/j.patter.2022.100655

N/A

0.612DataRank · unranked

58 citations

Kévin Contrepois, Mira N. Moufarrej, Ina A. Stelzer, Dorien Feyaerts, Xiaoyuan Han +28 more

Large-scale correlation network construction for unraveling the coordination of complex biological systems

Nature Computational Science(2023)10.1038/s43588-023-00429-y

N/A

0.533DataRank · unranked

34 citations

Huda Nassar, Camilo Espinosa, Ina A. Stelzer, Dorien Feyaerts, Eloïse Berson +25 more

Enhancer-driven gene regulatory networks reveal transcription factors governing T cell adaptation and differentiation in the tumor microenvironment

Immunity(2025)10.1016/j.immuni.2025.04.030

N/A

0.505DataRank · unranked

28 citations

Amber Gomez, Alec L. Plotkin, Brandon M. Pratt, Emily F. Merritt, Genevieve N. Mullins +15 more

Dominant CD4+ T cell receptors remain stable throughout antiretroviral therapy-mediated immune restoration in people with HIV

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101268

N/A

0.406DataRank · unranked

14 citations

Ann Marie Weideman, Jolene S. Ranek, Gatphan Atassi, JoAnn Kuruc, Adaora A. Adimora +10 more

Multiomics Longitudinal Modeling of Preeclamptic Pregnancies

Research Square(2021)10.21203/rs.3.rs-138586/v1

N/A

0.269DataRank · unranked

5 citations

Kévin Contrepois, Mira N. Moufarrej, Ina A. Stelzer, Dorien Feyaerts, Xiaoyuan Han +28 more

scLKME: A Landmark-based Approach for Generating Multi-cellular Sample Embeddings from Single-cell Data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.13.566846

N/A

0DataRank · unranked

3 citations

Natalie Stanley, Haidong Yi

DELVE: feature selection for preserving biological trajectories in single-cell data

Nature Communications(2024)10.1038/s41467-024-46773-z

N/A

0DataRank · unranked

21 citations

Wayne Stallaert, J. Justin Milner, Margaret A. Redick, Samuel C. Wolff, Adriana S. Beltrán +3 more

Benchmarking differential abundance methods for finding condition-specific prototypical cells in multi-sample single-cell datasets

Genome biology(2024)10.1186/s13059-023-03143-0

N/A

0DataRank · unranked

18 citations

Alec L. Plotkin, Natalie Stanley, Haidong Yi

Cellograph: a semi-supervised approach to analyzing multi-condition single-cell RNA-sequencing data using graph neural networks

BMC Bioinformatics(2024)10.1186/s12859-024-05641-9

N/A

0DataRank · unranked

7 citations

Natalie Stanley, Jeremy E. Purvis, Jamshaid A. Shahir

Cezanne/OTUD7B is a cell cycle-regulated deubiquitinase that antagonizes the degradation of APC/C substrates

UNC Libraries(2024)10.17615/wx15-j073

N/A

0DataRank · unranked

9 citations

Nicholas G. Brown, Michael J. Emanuele, Thomas Bonacci, Aussie Suzuki, Jeanette Gowen Cook +2 more

Compressing Networks with Super Nodes

UNC Libraries(2024)10.17615/49rh-r563

N/A

0DataRank · unranked

2 citations

Peter J. Mucha, Natalie Stanley, Roland Kwitt, Marc Niethammer

Conditional Similarity Triplets Enable Covariate-Informed Representations of Single-Cell Data

arXiv (Cornell University)(2024)10.48550/arxiv.2406.08638

N/A

0DataRank · unranked

1 citations

Haidong Yi, Natalie Stanley, Chi-Jane Chen

Benchmarking differential abundance methods for finding condition-specific prototypical cells in multi-sample single-cell datasets

UNC Libraries(2024)10.17615/kdmp-fa98

N/A

0DataRank · unranked

0 citations

Natalie Stanley, Haidong Yi, Alec L. Plotkin

DELVE: feature selection for preserving biological trajectories in single-cell data

UNC Libraries(2024)10.17615/0y08-gh70

N/A

0DataRank · unranked

0 citations

Margaret A. Redick, Wayne Stallaert, Jolene S. Ranek, Natalie Stanley, Samuel C. Wolff +3 more

Integrating temporal single-cell gene expression modalities for trajectory inference and disease prediction

UNC Libraries(2024)10.17615/byb4-w083

N/A

0DataRank · unranked

0 citations

Natalie Stanley, Jolene S. Ranek, Jeremy E. Purvis

Identifying Security Critical Properties for the Dynamic Verification of a Processor

UNC Libraries(2024)10.17615/7tjx-2410

N/A

0DataRank · unranked

0 citations

Andrew Chi, Rui Zhang, Cynthia Sturton, Natalie Stanley, Christopher Griggs

Cellograph: a semi-supervised approach to analyzing multi-condition single-cell RNA-sequencing data using graph neural networks

UNC Libraries(2024)10.17615/js3n-yx48

N/A

0DataRank · unranked

0 citations

Jeremy E. Purvis, Jamshaid A. Shahir, Natalie Stanley

Leveraging Single-Cell RNA-Seq to Generate Robust Microglia Aging Clocks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.05.616811

N/A

0DataRank · unranked

0 citations

Luvna Dhawka, Sneha Jaikumar, Yu-Chen Huang, Anthony S. Zannas, Natalie Stanley

Microglia Single‐Cell RNA‐Seq Enables Robust and Applicable Markers of Biological Aging

Aging Cell(2025)10.1111/acel.70095

N/A

0DataRank · unranked

4 citations

Luvna Dhawka, Sneha Jaikumar, Yuchen Huang, Anthony S. Zannas, Natalie Stanley

Conditional similarity triplets enable covariate-informed representations of single-cell data

BMC Bioinformatics(2025)10.1186/s12859-025-06069-5

N/A

0DataRank · unranked

1 citations

Haidong Yi, Natalie Stanley, Chi-Jane Chen

Single-cell transcriptomics yield insights into the stress-immune interplay and inform disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.05.658150

N/A

0DataRank · unranked

0 citations

Oksana Kosyk, Lillian Carpenter, Christina Georgiou, Brian C. Miller, Natalie Stanley +2 more

Spatial Coordinates as a Cell Language: A Multi-Sentence Framework for Imaging Mass Cytometry Analysis

(2025)10.18653/v1/2025.findings-acl.685

N/A

0DataRank · unranked

0 citations

Yuhang Chen, Sukwon Yun, Natalie Stanley, Tianlong Chen, Chi-Jane Chen

Spatial Coordinates as a Cell Language: A Multi-Sentence Framework for Imaging Mass Cytometry Analysis

arXiv (Cornell University)(2025)10.48550/arxiv.2506.01918

N/A

0DataRank · unranked

0 citations

Yuhang Chen, Sukwon Yun, Natalie Stanley, Tianlong Chen, Chi-Jane Chen

Dominant CD4+ T cell receptors remain stable throughout antiretroviral therapy-mediated immune restoration in people with HIV

UNC Libraries(2025)10.17615/a60k-4h29

N/A

0DataRank · unranked

0 citations

Michael G. Hudgens, Daniel R. Kuritzkes, Nancie M. Archin, JoAnn Kuruc, Joseph J. Eron +10 more

Single-cell peripheral immunoprofiling of Alzheimer’s and Parkinson’s diseases

Science Advances(2020)10.1126/sciadv.abd5575

N/A

0DataRank · unranked

63 citations

Rosemary Fernandez, Dunja Mrdjen, Anthony Culos, Chandresh R. Gajera, Adam M. Wawro +6 more

FastPG: Fast clustering of millions of single cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.19.159749

N/A

0DataRank · unranked

25 citations

Mahantesh Halappanavar, Stuart R. Jefferys, Ryan Gibson, Siyao Liu, Peter J. Mucha +4 more

Fenofibrate unexpectedly induces cardiac hypertrophy in mice lacking MuRF1

UNC Libraries(2020)10.17615/w4bt-nq20

N/A

0DataRank · unranked

0 citations

Jonathan C. Schisler, Natalie Stanley, Gopal Desai, Megan T. Quintana, Luge Li +4 more

Enhanced Detectability of Community Structure in Multilayer Networks through Layer Aggregation

UNC Libraries(2020)10.17615/sg1t-qd54

N/A

0DataRank · unranked

0 citations

Peter J. Mucha, Natalie Stanley, Saray Shai, Dane Taylor

Integrating temporal single-cell gene expression modalities for trajectory inference and disease prediction

Genome biology(2022)10.1186/s13059-022-02749-0

N/A

0DataRank · unranked

16 citations

Natalie Stanley, Jeremy E. Purvis, Jolene S. Ranek

Distribution-based sketching of single-cell samples

arXiv (Cornell University)(2022)10.1145/3535508.3545539

N/A

0DataRank · unranked

22 citations

Jolene S. Ranek, Siyuan Shan, Natalie Stanley, Junier B. Oliva, Vishal Athreya Baskaran

Transparent single-cell set classification with kernel mean embeddings

arXiv (Cornell University)(2022)10.1145/3535508.3545538

N/A

0DataRank · unranked

11 citations

Vishal Athreya Baskaran, Haidong Yi, Jolene S. Ranek, Natalie Stanley, Junier B. Oliva +1 more

Integrating temporal single-cell gene expression modalities for trajectory inference and disease prediction

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.01.482381

N/A

0DataRank · unranked

1 citations

Natalie Stanley, Jeremy E. Purvis, Jolene S. Ranek