D. James

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells”.

A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells

Genome Research(2021)10.1101/gr.275472.121

N/A

0.483DataRank · unranked

24 citations

Luca Mariani, Gerson Rothschild, Edwin R. Smith, Bryan J. Venters, Thomas R. Blanda +20 more

Accurate allocation of multimapped reads enables regulatory element analysis at repeats

Genome Research(2024)10.1101/gr.278638.123

N/A

0.428DataRank · unranked

11 citations

Jeffrey Shi, D. James, Shaun Mahony, Alexis Morrissey

Optimized ChIP-exo for mammalian cells and patterned sequencing flow cells

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf270

N/A

0.104DataRank · unranked

1 citations

Sohini Mukherjee, C. G. Cannon, Shaun Mahony, D. James

Allo: Accurate allocation of multi-mapped reads enables regulatory element analysis at repeats

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.12.556916

N/A

0DataRank · unranked

2 citations

Jeffrey Shi, D. James, Shaun Mahony, Alexis Morrissey

Joint sequence & chromatin neural networks characterize the differential abilities of Forkhead transcription factors to engage inaccessible chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.06.561228

N/A

0DataRank · unranked

8 citations

Jianyu Yang, Tomohiko Akiyama, D. James, Alexis Morrissey, Thomas R. Blanda +6 more

Optimized ChIP-exo for mammalian cells and patterned sequencing flow cells

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.14.670389

N/A

0DataRank · unranked

1 citations

Sohini Mukherjee, C. G. Cannon, Shaun Mahony, D. James

Optimized ChIP-exo for mammalian cells and patterned sequencing flow cells v1

(2025)10.17504/protocols.io.3byl46jjjgo5/v1

N/A

0DataRank · unranked

0 citations

Sohini Mukherjee, C. G. Cannon, Shaun Mahony, D. James