🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Ryan Snyder

Rutgers, The State University of New Jersey

ORCID: 0009-0009-6703-3652

Also affiliated with Indiana University – Purdue University Indianapolis

Biochemistry, Genetics and Molecular BiologyMaterials ScienceComputer SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 8 papers. Top paper: “Reaction Path-Force Matching in Collective Variables: Determining Ab Initio QM/MM Free Energy Profiles by Fitting Mean Force”.

Reaction Path-Force Matching in Collective Variables: Determining Ab Initio QM/MM Free Energy Profiles by Fitting Mean Force

Journal of Chemical Theory and Computation(2021)10.1021/acs.jctc.1c00245
N/A
0DataRank · unranked
23 citations

Ryan Snyder, Mulpuri Nagaraju, Yan Zhou, Pedro Ojeda-May, Seth Keeton +4 more

Facilitating ab initio QM/MM free energy simulations by Gaussian process regression with derivative observations

Physical Chemistry Chemical Physics(2022)10.1039/d2cp02820d
N/A
0DataRank · unranked
16 citations

Bryant Kim, Xiaoliang Pan, Yihan Shao, Jingzhi Pu, Ryan Snyder

Bridging semiempirical and ab initio QM/MM potentials by Gaussian process regression and its sparse variants for free energy simulation

The Journal of Chemical Physics(2023)10.1063/5.0156327
N/A
0DataRank · unranked
21 citations

Bryant Kim, Xiaoliang Pan, Yihan Shao, Jingzhi Pu, Ryan Snyder

Training machine learning potentials for reactive systems: A Colab tutorial on basic models

Journal of Computational Chemistry(2023)10.1002/jcc.27269
N/A
0DataRank · unranked
9 citations

Ryan Snyder, Jianing Wang, Chance Lander, Carly Wickizer, Richard Van +7 more

The Training of Machine Learning Potentials for Reactive Systems: A Colab Tutorial on Basic Models

ChemRxiv(2023)10.26434/chemrxiv-2023-545gw
N/A
0DataRank · unranked
2 citations

Ryan Snyder, Jianing Wang, Chance Lander, Carly Wickizer, Richard Van +7 more

Recent Developments in Amber Biomolecular Simulations

Journal of Chemical Information and Modeling(2025)10.1021/acs.jcim.5c01063
N/A
0DataRank · unranked
131 citations

David S. Cerutti, Vinícius Wilian D. Cruzeiro, Thomas A. Darden, Robert E. Duke, Mahdieh Ghazimirsaeed +26 more

Enhancing Gaussian process regression-accelerated QM/MM free energy simulations using atomic environment descriptors

ChemRxiv(2025)10.26434/chemrxiv-2025-hg8n7
N/A
0DataRank · unranked
0 citations

Dongru Li, T.‐L. HO, Bryant Kim, Hysum Qazi, Xiaoliang Pan +3 more

Enhancing Gaussian process regression-accelerated QM/MM free energy simulations using atomic environment descriptors

ChemRxiv(2025)10.26434/chemrxiv-2025-hg8n7-v2
N/A
0DataRank · unranked
0 citations

Dongru Li, T.‐L. HO, Bryant Kim, Hysum Qazi, Xiaoliang Pan +3 more