Matthew D. Shoulders

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 30 papers. Top paper: “SUMOylation and the HSF1-Regulated Chaperone Network Converge to Promote Proteostasis in Response to Heat Shock”.

SUMOylation and the HSF1-Regulated Chaperone Network Converge to Promote Proteostasis in Response to Heat Shock

Cell Reports(2019)10.1016/j.celrep.2018.12.027

N/A

2.0DataRank · unranked

62 citations

Rebecca M. Sebastian, Christopher L. Moore, Monique P.C. Mulder, Huib Ovaa, Matthew D. Shoulders +2 more

Characterizing the Altered Cellular Proteome Induced by the Stress-Independent Activation of Heat Shock Factor 1

ACS Chemical Biology(2014)10.1021/cb500062n

N/A

1.5DataRank · unranked

62 citations

Joseph C. Genereux, Tadasuke Naito, Richard I. Morimoto, Evan T. Powers, Matthew D. Shoulders +2 more

Transportable, Chemical Genetic Methodology for the Small Molecule-Mediated Inhibition of Heat Shock Factor 1

ACS Chemical Biology(2016)10.1021/acschembio.5b00740

N/A

1.2DataRank · unranked

30 citations

Mahender B. Dewal, Emmanuel E. Nekongo, Sebasthian Santiago, Nancy B. Lu, Stuart S. Levine +2 more

ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis

Life Science Alliance(2024)10.26508/lsa.202402842

N/A

0.241DataRank · unranked

4 citations

Sophia Mirda Abularach, Seo-yeon Kim, Agata A. Bikovtseva, Jinia Lilianty, Vincent L. Butty +5 more

XBP1s-Mediated ER Proteostasis Network Enhancement Can Selectively Improve the Folding and Secretion of an Osteogenesis Imperfecta-Causing Collagen-I Variant

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.15.439909

N/A

0DataRank · unranked

1 citations

Ngoc‐Duc Doan, Agata A. Bikovtseva, Lynn Rowley, Vincent L. Butty, MaryAnn E. Weis +5 more

The Host Cell’s Endoplasmic Reticulum Proteostasis Network Profoundly Shapes the Protein Sequence Space Accessible to HIV Envelope

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.24.441266

N/A

0DataRank · unranked

0 citations

Emmanuel E. Nekongo, Jessica Patrick, Angela M. Phillips, Anna I. Ponomarenko, Samuel J. Hendel +5 more

In vivo hypermutation and continuous evolution

Nature Reviews Methods Primers(2022)10.1038/s43586-022-00119-5

N/A

0DataRank · unranked

141 citations

Gordon Rix, Amanuella A. Mengiste, Beatriz Álvarez, Daeje Seo, Haiqi Chen +16 more

In vivo hypermutation and continuous evolution

Nature Reviews Methods Primers(2022)10.1038/s43586-022-00130-w

N/A

0DataRank · unranked

58 citations

Gordon Rix, Amanuella A. Mengiste, Beatriz Álvarez, Daeje Seo, Haiqi Chen +16 more

Loss of heat shock factor 1 promotes hepatic stellate cell activation and drives liver fibrosis

Hepatology Communications(2022)10.1002/hep4.2058

N/A

0DataRank · unranked

6 citations

Anuradha Ratna, Arlene Lim, Rebecca M. Sebastian, Christopher Moore, Aveline Filliol +6 more

The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope

PLoS Biology(2022)10.1371/journal.pbio.3001569

N/A

0DataRank · unranked

12 citations

Emmanuel E. Nekongo, Jessica Patrick, Tiffani Hui, Angela M. Phillips, Anna I. Ponomarenko +8 more

Viral Evolution Shaped by Host Proteostasis Networks

Annual Review of Virology(2023)10.1146/annurev-virology-100220-112120

N/A

0DataRank · unranked

17 citations

Jessica Patrick, C. Brandon Ogbunugafor, Matthew D. Shoulders, Jimin Yoon

Using CRISPR/Cas9 to generate a heterozygous COL2A1 p.R719C iPSC line (MCRIi019-A-6) model of human precocious osteoarthritis

Stem Cell Research(2023)10.1016/j.scr.2023.103020

N/A

0DataRank · unranked

7 citations

Sophia Mirda Abularach, Lisa Sampurno, John F. Bateman, Shireen R. Lamandé, Matthew D. Shoulders +1 more

Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications

eLife(2023)10.7554/elife.88480

N/A

0DataRank · unranked

2 citations

Tandin Dorji, Ra’Mal M. Harris, Matthew D. Shoulders, C. Brandon Ogbunugafor, Rafael F. Guerrero

Epistasis and pleiotropy shape biophysical protein subspaces associated with drug resistance

Physical review. E(2023)10.1103/physreve.108.054408

N/A

0DataRank · unranked

3 citations

Rafael F. Guerrero, Miles D. Miller-Dickson, Eugene I. Shakhnovich, Matthew D. Shoulders, C. Brandon Ogbunugafor

Epistasis meets pleiotropy in shaping biophysical protein subspaces associated with antimicrobial resistance

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.09.535490

N/A

0DataRank · unranked

4 citations

Rafael F. Guerrero, Eugene I. Shakhnovich, Matthew D. Shoulders, C. Brandon Ogbunugafor

The Immune-Evasive Proline 283 Substitution in Influenza Nucleoprotein Increases Aggregation Propensity Without Altering the Native Structure

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.08.556894

N/A

0DataRank · unranked

1 citations

Yu Meng Zhang, Cheenou Her, Robert A. Grant, A.M. Ponomarenko, Bryce E. Ackermann +3 more

Evolutionary druggability: leveraging low-dimensional fitness landscapes towards new metrics for antimicrobial applications

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.08.536116

N/A

0DataRank · unranked

0 citations

Tandin Dorji, Ra’Mal M. Harris, Matthew D. Shoulders, C. Brandon Ogbunugafor, Rafael F. Guerrero

Reviewer #2 (Public Review): Evolutionary druggability: leveraging low-dimensional fitness landscapes towards new metrics for antimicrobial applications

(2023)10.7554/elife.88480.2.sa1

N/A

0DataRank · unranked

0 citations

Tandin Dorji, Ra’Mal M. Harris, Matthew D. Shoulders, C. Brandon Ogbunugafor, Rafael F. Guerrero

Evolutionary druggability: leveraging low-dimensional fitness landscapes towards new metrics for antimicrobial applications

(2023)10.7554/elife.88480.2

N/A

0DataRank · unranked

0 citations

Tandin Dorji, Ra’Mal M. Harris, Matthew D. Shoulders, C. Brandon Ogbunugafor, Rafael F. Guerrero

An outcome-defining role for the triple-helical domain in regulating collagen-I assembly

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2412948121

N/A

0DataRank · unranked

18 citations

Rasia C. Li, Isabella M. Borgula, Sophia Mirda Abularach, Andrew S. DiChiara, Ronald T. Raines +2 more

Endoplasmic Reticulum Oxidative Stress Promotes Glutathione-Dependent Oxidation of Collagen-1A1 and Promotes Lung Fibroblast Activation

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2023-0379oc

N/A

0DataRank · unranked

12 citations

Maximilian B. MacPherson, Shi Biao Chia, Evan A. Elko, Reem Aboushousha, David J. Seward +14 more

Protein Glycosylation Patterns Shaped by the IRE1‐XBP1s Arm of the Unfolded Protein Response

Israel Journal of Chemistry(2024)10.1002/ijch.202300162

N/A

0DataRank · unranked

5 citations

Matthew D. Shoulders, Kenny Chen

The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure

Science Advances(2024)10.1126/sciadv.adl6144

N/A

0DataRank · unranked

3 citations

Yu Meng Zhang, Cheenou Her, Robert A. Grant, Anna I. Ponomarenko, Bryce E. Ackermann +5 more

Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications

eLife(2024)10.7554/elife.88480.3

N/A

0DataRank · unranked

1 citations

Tandin Dorji, Ra’Mal M. Harris, Matthew D. Shoulders, C. Brandon Ogbunugafor, Rafael F. Guerrero

Dominant-negative TP53 mutations potentiated by the HSF1-regulated proteostasis network

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.01.621414

N/A

0DataRank · unranked

0 citations

Rebecca M. Sebastian, Kristi E. Liivak, Jessica Patrick, Tiffani Hui, David R. Amici +9 more

Failed Cellular Surveillance Enables Pathogenic Matrix Deposition in a COL2A1 -Related Osteoarthritis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622468

N/A

0DataRank · unranked

0 citations

Sophia Mirda Abularach, Michael Xiong, Seo-yeon Kim, Agata A. Bikovtseva, Vincent L. Butty +5 more

Failed cellular surveillance enables pathogenic matrix deposition in a COL2A1-related osteoarthritis

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110436

N/A

0DataRank · unranked

3 citations

Sophia Mirda Abularach, Michael Xiong, Seo-yeon Kim, Agata A. Bikovtseva, Vincent L. Butty +5 more

Elucidation of proteostasis defects caused by osteogenesis imperfecta mutations in the collagen-α2(I) C-propeptide domain

Journal of Biological Chemistry(2020)10.1074/jbc.ra120.014071

N/A

0DataRank · unranked

19 citations

Azade S. Hosseini, Agata A. Bikovtseva, Michelle S. Huang, Andrew S. DiChiara, Louis J. Papa +3 more

Directed evolution in mammalian cells

Nature Methods(2021)10.1038/s41592-021-01090-x

N/A

0DataRank · unranked

81 citations

Matthew D. Shoulders, Samuel J. Hendel

Collagen’s enigmatic, highly conserved N -glycan has an essential proteostatic function

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2026608118

N/A

0DataRank · unranked

22 citations

Madeline Wong, Andrew S. DiChiara, Azade S. Hosseini, Matthew D. Shoulders, Rasia C. Li